RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 GSRP00390 522 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 EFNA5P52803 228 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 CNTN2Q02246 1040 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 STXBP2Q15833 593 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 CA9Q16790 459 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 SFT2D3Q587I9 215 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 CFAP157Q5JU67 520 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 EFHC1Q5JVL4 640 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 LPCAT4Q643R3 524 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 EEF1DP3Q658K8 133 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 DHDDSQ86SQ9 333 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 AGBL3Q8NEM8 1001 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 OR6Y1Q8NGX8 325 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 GSDMBQ8TAX9 411 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 RAB3IL1Q8TBN0 382 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 FAM172AQ8WUF8 416 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 DEPDC1BQ8WUY9 529 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 MYOZ2Q9NPC6 264 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 NRBP2Q9NSY0 501 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 APBA3O96018 575 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 NFICP08651 508 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 UBA1P22314 1058 aaKnown RBP11.29□□□□□ -0.6
SNIP1-204ENST00000638725 KCNA4P22459 653 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 ADORA2AP29274 412 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 CDK7P50613 346 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 STAT5BP51692 787 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 RPS6KA3P51812 740 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 LAMTOR4Q0VGL1 99 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 CBLBQ13191 982 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 RABGAP1LQ5R372 815 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 MBLAC2Q68D91 279 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 DPY19L2Q6NUT2 758 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 FAM183BPQ6ZVS7 135 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 RSPH3Q86UC2 560 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 RASSF3Q86WH2 238 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 WDR75Q8IWA0 830 aaKnown RBP11.29□□□□□ -0.6
SNIP1-204ENST00000638725 C1orf127Q8N9H9 656 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 PCDH19Q8TAB3 1148 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 SLC26A7Q8TE54 656 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 APBB2Q92870 758 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 CCDC124Q96CT7 223 aaKnown RBP11.29□□□□□ -0.6
SNIP1-204ENST00000638725 EBNA1BP2Q99848 306 aaKnown RBP11.29□□□□□ -0.6
SNIP1-204ENST00000638725 FZD1Q9UP38 647 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 AFG3L2Q9Y4W6 797 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 RLFQ13129 1914 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 B4GALT4O60513 344 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 CILPO75339 1184 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 GJB1P08034 283 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 FGF3P11487 239 aaPredicted RBP11.28□□□□□ -0.6
SNIP1-204ENST00000638725 MAGEA6P43360 314 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 CXCL9Q07325 125 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 ASPHQ12797 758 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 TMEM132AQ24JP5 1023 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 LIN52Q52LA3 116 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 TEDDM1Q5T9Z0 273 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 ATG14Q6ZNE5 492 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 ARCQ7LC44 396 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 PDSS2Q86YH6 399 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 PIWIL2Q8TC59 973 aaKnown RBP11.28□□□□□ -0.6
SNIP1-204ENST00000638725 TMEM176AQ96HP8 235 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 GORASP1Q9BQQ3 440 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 SPATA16Q9BXB7 569 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 TEX13BQ9BXU2 312 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 CYP4F11Q9HBI6 524 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 PCDH18Q9HCL0 1135 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 NGRNQ9NPE2 291 aaKnown RBP11.28□□□□□ -0.6
SNIP1-204ENST00000638725 EMCNQ9ULC0 261 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 BCLAF3A2AJT9 711 aaKnown RBP11.28□□□□□ -0.6
SNIP1-204ENST00000638725 F5H423 210 aaPredicted RBP11.28□□□□□ -0.6
SNIP1-204ENST00000638725 LGR5O75473 907 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 ITGB3P05106 788 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 ATP5BP06576 529 aaKnown RBP11.28□□□□□ -0.6
SNIP1-204ENST00000638725 MAGEA3P43357 314 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 MSLNQ13421 630 aaPredicted RBP11.28□□□□□ -0.6
SNIP1-204ENST00000638725 CCNIQ14094 377 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 SMAD1Q15797 465 aaKnown RBP11.28□□□□□ -0.6
SNIP1-204ENST00000638725 N4BP2L1Q5TBK1 243 aaPredicted RBP11.28□□□□□ -0.6
SNIP1-204ENST00000638725 AAGABQ6PD74 315 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 MPZL3Q6UWV2 235 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 MAP7D3Q8IWC1 876 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 ZBTB8OSQ8IWT0 167 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 EFCAB3Q8N7B9 438 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 HIPK4Q8NE63 616 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 MCUQ8NE86 351 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 LRRC39Q96DD0 335 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 HEXIM2Q96MH2 286 aaKnown RBP11.28□□□□□ -0.6
SNIP1-204ENST00000638725 STK32BQ9NY57 414 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 ADAMTS6Q9UKP5 1117 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 PHIPQ8WWQ0 1821 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 LCTP09848 1927 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 SIN3BO75182 1162 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 FARP2O94887 1054 aaPredicted RBP11.28□□□□□ -0.6
SNIP1-204ENST00000638725 PROCP04070 461 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 ETS2P15036 469 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 CYP3A5P20815 502 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 TGM2P21980 687 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 HMGB2P26583 209 aaKnown RBP11.28□□□□□ -0.6
SNIP1-204ENST00000638725 PEX2P28328 305 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 L1CAMP32004 1257 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 ICAM3P32942 547 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms