RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 CXCR3P49682 368 aa21.92■■□□□ 1.1
CLN8-213ENST00000637156 DPYSL3Q14195 570 aa21.92■■□□□ 1.1
CLN8-213ENST00000637156 PPP2R5EQ16537 467 aa21.92■■□□□ 1.1
CLN8-213ENST00000637156 ARHGAP18Q8N392 663 aa21.92■■□□□ 1.1
CLN8-213ENST00000637156 CALN1Q9BXU9 219 aa21.92■■□□□ 1.1
CLN8-213ENST00000637156 FAM204AQ9H8W3 233 aa21.92■■□□□ 1.1
CLN8-213ENST00000637156 TLR9Q9NR96 1032 aa21.92■■□□□ 1.1
CLN8-213ENST00000637156 PCDHA11Q9Y5I1 949 aa21.92■■□□□ 1.1
CLN8-213ENST00000637156 ADRA1BP35368 520 aa21.92■■□□□ 1.1
CLN8-213ENST00000637156 UBE3AQ05086 875 aa21.92■■□□□ 1.1
CLN8-213ENST00000637156 TWF1Q12792 350 aa21.92■■□□□ 1.1
CLN8-213ENST00000637156 PDK2Q15119 407 aa21.92■■□□□ 1.1
CLN8-213ENST00000637156 DPYSL2Q16555 572 aa21.92■■□□□ 1.1
CLN8-213ENST00000637156 PLPP4Q5VZY2 271 aa21.92■■□□□ 1.1
CLN8-213ENST00000637156 PYROXD2Q8N2H3 581 aa21.92■■□□□ 1.1
CLN8-213ENST00000637156 GPR161Q8N6U8 529 aaKnown RBP21.92■■□□□ 1.1
CLN8-213ENST00000637156 HINFPQ9BQA5 517 aa21.92■■□□□ 1.1
CLN8-213ENST00000637156 WDCPQ9H6R7 721 aa21.92■■□□□ 1.1
CLN8-213ENST00000637156 PCDH18Q9HCL0 1135 aa21.92■■□□□ 1.1
CLN8-213ENST00000637156 TLR8Q9NR97 1041 aaKnown RBP21.92■■□□□ 1.1
CLN8-213ENST00000637156 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.92■■□□□ 1.1
CLN8-213ENST00000637156 CLIC5Q9NZA1 410 aa21.92■■□□□ 1.1
CLN8-213ENST00000637156 AP4E1Q9UPM8 1137 aa21.92■■□□□ 1.1
CLN8-213ENST00000637156 R3HDM2Q9Y2K5 976 aaKnown RBP21.92■■□□□ 1.1
CLN8-213ENST00000637156 PLXNA4Q9HCM2 1894 aa21.91■■□□□ 1.1
CLN8-213ENST00000637156 TJP3O95049 919 aa21.91■■□□□ 1.1
CLN8-213ENST00000637156 TBX18O95935 607 aa21.91■■□□□ 1.1
CLN8-213ENST00000637156 ADH1AP07327 375 aa21.91■■□□□ 1.1
CLN8-213ENST00000637156 KLRC2P26717 231 aa21.91■■□□□ 1.1
CLN8-213ENST00000637156 IRS1P35568 1242 aa21.91■■□□□ 1.1
CLN8-213ENST00000637156 CYP1B1Q16678 543 aa21.91■■□□□ 1.1
CLN8-213ENST00000637156 KCTD19Q17RG1 926 aaPredicted RBP21.91■■□□□ 1.1
CLN8-213ENST00000637156 MAP7D3Q8IWC1 876 aa21.91■■□□□ 1.1
CLN8-213ENST00000637156 TNS4Q8IZW8 715 aa21.91■■□□□ 1.1
CLN8-213ENST00000637156 MICAL1Q8TDZ2 1067 aa21.91■■□□□ 1.1
CLN8-213ENST00000637156 C1orf54Q8WWF1 131 aa21.91■■□□□ 1.1
CLN8-213ENST00000637156 MAGOHBQ96A72 148 aaKnown RBP21.91■■□□□ 1.1
CLN8-213ENST00000637156 MYRFLQ96LU7 910 aa21.91■■□□□ 1.1
CLN8-213ENST00000637156 TGS1Q96RS0 853 aaKnown RBP21.91■■□□□ 1.1
CLN8-213ENST00000637156 SMOC2Q9H3U7 446 aa21.91■■□□□ 1.1
CLN8-213ENST00000637156 DHX35Q9H5Z1 703 aaKnown RBP21.91■■□□□ 1.1
CLN8-213ENST00000637156 AMACRQ9UHK6 382 aa21.91■■□□□ 1.1
CLN8-213ENST00000637156 INSL5Q9Y5Q6 135 aa21.91■■□□□ 1.1
CLN8-213ENST00000637156 GOLGA6L10A0A0M3HER8 536 aa21.9■■□□□ 1.1
CLN8-213ENST00000637156 CSH1P0DML2 217 aa21.9■■□□□ 1.1
CLN8-213ENST00000637156 CSH2P0DML3 217 aa21.9■■□□□ 1.1
CLN8-213ENST00000637156 RARGP13631 454 aa21.9■■□□□ 1.1
CLN8-213ENST00000637156 PSEN1P49768 467 aa21.9■■□□□ 1.1
CLN8-213ENST00000637156 ERVK-21P61565 698 aa21.9■■□□□ 1.1
CLN8-213ENST00000637156 SLC7A5Q01650 507 aa21.9■■□□□ 1.1
CLN8-213ENST00000637156 KRT81Q14533 505 aa21.9■■□□□ 1.1
CLN8-213ENST00000637156 PPP6R3Q5H9R7 873 aaPredicted RBP21.9■■□□□ 1.1
CLN8-213ENST00000637156 TTC27Q6P3X3 843 aa21.9■■□□□ 1.1
CLN8-213ENST00000637156 DNAJB7Q7Z6W7 309 aaPredicted RBP21.9■■□□□ 1.1
CLN8-213ENST00000637156 RNF139Q8WU17 664 aa21.9■■□□□ 1.1
CLN8-213ENST00000637156 MAIP1Q8WWC4 291 aa21.9■■□□□ 1.1
CLN8-213ENST00000637156 EMILIN2Q9BXX0 1053 aa21.9■■□□□ 1.1
CLN8-213ENST00000637156 PBX4Q9BYU1 374 aa21.9■■□□□ 1.1
CLN8-213ENST00000637156 LRRC19Q9H756 370 aa21.9■■□□□ 1.1
CLN8-213ENST00000637156 DMGDHQ9UI17 866 aaKnown RBP21.9■■□□□ 1.1
CLN8-213ENST00000637156 CST8O60676 142 aa21.9■■□□□ 1.1
CLN8-213ENST00000637156 GBP1P32455 592 aa21.9■■□□□ 1.1
CLN8-213ENST00000637156 PSTKQ8IV42 348 aaKnown RBP21.9■■□□□ 1.1
CLN8-213ENST00000637156 RNF157Q96PX1 679 aa21.9■■□□□ 1.1
CLN8-213ENST00000637156 KCTD15Q96SI1 283 aaPredicted RBP21.9■■□□□ 1.1
CLN8-213ENST00000637156 PARD6BQ9BYG5 372 aa21.9■■□□□ 1.1
CLN8-213ENST00000637156 PLEKHA4Q9H4M7 779 aa21.9■■□□□ 1.1
CLN8-213ENST00000637156 IRAK2O43187 625 aa21.89■■□□□ 1.09
CLN8-213ENST00000637156 MSI1O43347 362 aaKnown RBP21.89■■□□□ 1.09
CLN8-213ENST00000637156 RAD51CO43502 376 aa21.89■■□□□ 1.09
CLN8-213ENST00000637156 GLE1Q53GS7 698 aaKnown RBP21.89■■□□□ 1.09
CLN8-213ENST00000637156 MSANTD2Q6P1R3 559 aa21.89■■□□□ 1.09
CLN8-213ENST00000637156 ATG4AQ8WYN0 398 aa21.89■■□□□ 1.09
CLN8-213ENST00000637156 NTAN1Q96AB6 310 aa21.89■■□□□ 1.09
CLN8-213ENST00000637156 PNKPQ96T60 521 aa21.89■■□□□ 1.09
CLN8-213ENST00000637156 FAM118BQ9BPY3 351 aa21.89■■□□□ 1.09
CLN8-213ENST00000637156 TKTL2Q9H0I9 626 aa21.89■■□□□ 1.09
CLN8-213ENST00000637156 SAE1Q9UBE0 346 aaPredicted RBP21.89■■□□□ 1.09
CLN8-213ENST00000637156 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.88■■□□□ 1.09
CLN8-213ENST00000637156 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.88■■□□□ 1.09
CLN8-213ENST00000637156 H0YGN5 161 aa21.88■■□□□ 1.09
CLN8-213ENST00000637156 PHF2O75151 1096 aa21.88■■□□□ 1.09
CLN8-213ENST00000637156 KCNJ1P48048 391 aa21.88■■□□□ 1.09
CLN8-213ENST00000637156 AIF1P55008 147 aa21.88■■□□□ 1.09
CLN8-213ENST00000637156 SCAPQ12770 1279 aa21.88■■□□□ 1.09
CLN8-213ENST00000637156 ANKRD20A8PQ5CZ79 823 aa21.88■■□□□ 1.09
CLN8-213ENST00000637156 SNX30Q5VWJ9 437 aa21.88■■□□□ 1.09
CLN8-213ENST00000637156 C8orf74Q6P047 294 aa21.88■■□□□ 1.09
CLN8-213ENST00000637156 SND1Q7KZF4 910 aaKnown RBP eCLIP21.88■■□□□ 1.09
CLN8-213ENST00000637156 VSIG1Q86XK7 387 aa21.88■■□□□ 1.09
CLN8-213ENST00000637156 C12orf50Q8NA57 414 aaPredicted RBP21.88■■□□□ 1.09
CLN8-213ENST00000637156 PCDH19Q8TAB3 1148 aa21.88■■□□□ 1.09
CLN8-213ENST00000637156 DCLK3Q9C098 648 aa21.88■■□□□ 1.09
CLN8-213ENST00000637156 CERS4Q9HA82 394 aa21.88■■□□□ 1.09
CLN8-213ENST00000637156 CWC15Q9P013 229 aaKnown RBP21.88■■□□□ 1.09
CLN8-213ENST00000637156 GREB1Q4ZG55 1949 aa21.88■■□□□ 1.09
CLN8-213ENST00000637156 ZNF840PA6NDX5 716 aa21.88■■□□□ 1.09
CLN8-213ENST00000637156 H3BNC9 293 aa21.88■■□□□ 1.09
CLN8-213ENST00000637156 CHRNA3P32297 505 aa21.88■■□□□ 1.09
CLN8-213ENST00000637156 COILP38432 576 aaPredicted RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms