RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 TMEM143Q96AN5 459 aa15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 GCOM2Q9BZD3 368 aaPredicted RBP15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 PLAC1Q9HBJ0 212 aa15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 ETNK2Q9NVF9 386 aa15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 CHCHD3Q9NX63 227 aaKnown RBP15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 DTNAQ9Y4J8 743 aa15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 GMEB1Q9Y692 573 aa15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 C15orf38-AP3S2A0A0A6YYH1 394 aa15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 ZBED1O96006 694 aa15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 APRTP07741 180 aa15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 TGM2P21980 687 aa15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 ARL2P36404 184 aa15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 ACTR2P61160 394 aa15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 TAF5Q15542 800 aa15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 ZNF699Q32M78 642 aa15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 GRAMD1BQ3KR37 738 aa15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 OGFRL1Q5TC84 451 aaPredicted RBP15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 ABHD15Q6UXT9 468 aa15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 B3GNT6Q6ZMB0 384 aa15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 DENND5BQ6ZUT9 1274 aa15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 ARPINQ7Z6K5 226 aa15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 POU5F2Q8N7G0 328 aa15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 DEPDC1BQ8WUY9 529 aa15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 MPP4Q96JB8 637 aa15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 ZFRQ96KR1 1074 aaKnown RBP15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 PRICKLE1Q96MT3 831 aaPredicted RBP15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 EBNA1BP2Q99848 306 aaKnown RBP15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 MTMR12Q9C0I1 747 aa15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 OCEL1Q9H607 264 aa15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 SUDS3Q9H7L9 328 aaPredicted RBP15.31■□□□□ 0.04
CACNA1A-220ENST00000635988 BCLAF3A2AJT9 711 aaKnown RBP15.3■□□□□ 0.04
CACNA1A-220ENST00000635988 UGT1A9O60656 530 aa15.3■□□□□ 0.04
CACNA1A-220ENST00000635988 ALOX15P16050 662 aaPredicted RBP15.3■□□□□ 0.04
CACNA1A-220ENST00000635988 HMGB2P26583 209 aaKnown RBP15.3■□□□□ 0.04
CACNA1A-220ENST00000635988 FDFT1P37268 417 aa15.3■□□□□ 0.04
CACNA1A-220ENST00000635988 DEUP1Q05D60 604 aa15.3■□□□□ 0.04
CACNA1A-220ENST00000635988 FSCBQ5H9T9 825 aa15.3■□□□□ 0.04
CACNA1A-220ENST00000635988 TMEM126BQ8IUX1 230 aa15.3■□□□□ 0.04
CACNA1A-220ENST00000635988 RNF157Q96PX1 679 aa15.3■□□□□ 0.04
CACNA1A-220ENST00000635988 UGT1A7Q9HAW7 530 aa15.3■□□□□ 0.04
CACNA1A-220ENST00000635988 UGT1A10Q9HAW8 530 aa15.3■□□□□ 0.04
CACNA1A-220ENST00000635988 UGT1A8Q9HAW9 530 aa15.3■□□□□ 0.04
CACNA1A-220ENST00000635988 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.3■□□□□ 0.04
CACNA1A-220ENST00000635988 CLIC5Q9NZA1 410 aa15.3■□□□□ 0.04
CACNA1A-220ENST00000635988 ARHGAP26Q9UNA1 814 aa15.3■□□□□ 0.04
CACNA1A-220ENST00000635988 CNTNAP1P78357 1384 aa15.3■□□□□ 0.04
CACNA1A-220ENST00000635988 HMX2A2RU54 273 aa15.3■□□□□ 0.04
CACNA1A-220ENST00000635988 PDE5AO76074 875 aa15.3■□□□□ 0.04
CACNA1A-220ENST00000635988 CLPTM1O96005 669 aa15.3■□□□□ 0.04
CACNA1A-220ENST00000635988 ITGA2BP08514 1039 aa15.3■□□□□ 0.04
CACNA1A-220ENST00000635988 MAGEA3P43357 314 aa15.3■□□□□ 0.04
CACNA1A-220ENST00000635988 IDH3AP50213 366 aa15.3■□□□□ 0.04
CACNA1A-220ENST00000635988 ZNF143P52747 638 aaPredicted RBP15.3■□□□□ 0.04
CACNA1A-220ENST00000635988 MMRN1Q13201 1228 aa15.3■□□□□ 0.04
CACNA1A-220ENST00000635988 PDK2Q15119 407 aa15.3■□□□□ 0.04
CACNA1A-220ENST00000635988 FKBP1CQ5VVH2 108 aa15.3■□□□□ 0.04
CACNA1A-220ENST00000635988 PDPK2PQ6A1A2 396 aa15.3■□□□□ 0.04
CACNA1A-220ENST00000635988 DEFB107AQ8IZN7 70 aa15.3■□□□□ 0.04
CACNA1A-220ENST00000635988 CATSPER1Q8NEC5 780 aa15.3■□□□□ 0.04
CACNA1A-220ENST00000635988 SLC7A3Q8WY07 619 aa15.3■□□□□ 0.04
CACNA1A-220ENST00000635988 CCDC124Q96CT7 223 aaKnown RBP15.3■□□□□ 0.04
CACNA1A-220ENST00000635988 NMD3Q96D46 503 aaKnown RBP15.3■□□□□ 0.04
CACNA1A-220ENST00000635988 MCRS1Q96EZ8 462 aa15.3■□□□□ 0.04
CACNA1A-220ENST00000635988 CPXM1Q96SM3 734 aa15.3■□□□□ 0.04
CACNA1A-220ENST00000635988 DCDC2Q9UHG0 476 aa15.3■□□□□ 0.04
CACNA1A-220ENST00000635988 PCDHA11Q9Y5I1 949 aa15.3■□□□□ 0.04
CACNA1A-220ENST00000635988 FGF3P11487 239 aaPredicted RBP15.29■□□□□ 0.04
CACNA1A-220ENST00000635988 ASPAP45381 313 aa15.29■□□□□ 0.04
CACNA1A-220ENST00000635988 ALDH1A3P47895 512 aa15.29■□□□□ 0.04
CACNA1A-220ENST00000635988 MTTPP55157 894 aa15.29■□□□□ 0.04
CACNA1A-220ENST00000635988 TBL3Q12788 808 aaKnown RBP15.29■□□□□ 0.04
CACNA1A-220ENST00000635988 C1orf228Q6PIY5 440 aa15.29■□□□□ 0.04
CACNA1A-220ENST00000635988 IRGQQ8WZA9 623 aa15.29■□□□□ 0.04
CACNA1A-220ENST00000635988 SIGLEC10Q96LC7 697 aa15.29■□□□□ 0.04
CACNA1A-220ENST00000635988 ZNF778Q96MU6 729 aa15.29■□□□□ 0.04
CACNA1A-220ENST00000635988 CNPY3Q9BT09 278 aa15.29■□□□□ 0.04
CACNA1A-220ENST00000635988 PPP1R1BQ9UD71 204 aaPredicted RBP15.29■□□□□ 0.04
CACNA1A-220ENST00000635988 TJP2Q9UDY2 1190 aa15.29■□□□□ 0.04
CACNA1A-220ENST00000635988 CYTH4Q9UIA0 394 aa15.29■□□□□ 0.04
CACNA1A-220ENST00000635988 RAB26Q9ULW5 256 aa15.29■□□□□ 0.04
CACNA1A-220ENST00000635988 PSMD13Q9UNM6 376 aa15.29■□□□□ 0.04
CACNA1A-220ENST00000635988 ITM2AO43736 263 aa15.28■□□□□ 0.04
CACNA1A-220ENST00000635988 GSRP00390 522 aa15.28■□□□□ 0.04
CACNA1A-220ENST00000635988 SUPT20HL2P0C7V6 817 aa15.28■□□□□ 0.04
CACNA1A-220ENST00000635988 SMIM18P0DKX4 95 aa15.28■□□□□ 0.04
CACNA1A-220ENST00000635988 TPSB2P20231 275 aa15.28■□□□□ 0.04
CACNA1A-220ENST00000635988 ITGAXP20702 1163 aa15.28■□□□□ 0.04
CACNA1A-220ENST00000635988 SNAPC2Q13487 334 aa15.28■□□□□ 0.04
CACNA1A-220ENST00000635988 TPSAB1Q15661 275 aa15.28■□□□□ 0.04
CACNA1A-220ENST00000635988 SUPT20HL1Q3ZLR7 823 aa15.28■□□□□ 0.04
CACNA1A-220ENST00000635988 SEZ6Q53EL9 994 aa15.28■□□□□ 0.04
CACNA1A-220ENST00000635988 KLC3Q6P597 504 aa15.28■□□□□ 0.04
CACNA1A-220ENST00000635988 TMC7Q7Z402 723 aa15.28■□□□□ 0.04
CACNA1A-220ENST00000635988 PQLC1Q8N2U9 271 aa15.28■□□□□ 0.04
CACNA1A-220ENST00000635988 PLD5Q8N7P1 536 aa15.28■□□□□ 0.04
CACNA1A-220ENST00000635988 MIPOL1Q8TD10 442 aa15.28■□□□□ 0.04
CACNA1A-220ENST00000635988 MRPS26Q9BYN8 205 aaKnown RBP15.28■□□□□ 0.04
CACNA1A-220ENST00000635988 CYP4F11Q9HBI6 524 aa15.28■□□□□ 0.04
CACNA1A-220ENST00000635988 GALNT8Q9NY28 637 aa15.28■□□□□ 0.04
CACNA1A-220ENST00000635988 BCAP29Q9UHQ4 241 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms