RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 ATP5F1P24539 256 aaPredicted RBP3.21□□□□□ -1.9
PSPC1-208ENST00000635562 ATP5DP30049 168 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 HSPA1LP34931 641 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 HNF4AP41235 474 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 MTHFRP42898 656 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 MAGEA8P43361 318 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 CTCFP49711 727 aaPredicted RBP3.21□□□□□ -1.9
PSPC1-208ENST00000635562 TOB1P50616 345 aaPredicted RBP3.21□□□□□ -1.9
PSPC1-208ENST00000635562 CHN2P52757 468 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 NOMO3P69849 1222 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 UBXN1Q04323 297 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 AP1B1Q10567 949 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 BLMHQ13867 455 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 DAG1Q14118 895 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 BECN1Q14457 450 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 HABP2Q14520 560 aaPredicted RBP3.21□□□□□ -1.9
PSPC1-208ENST00000635562 RABEP1Q15276 862 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 TAF12Q16514 161 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 MMEL1Q495T6 779 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 NOMO2Q5JPE7 1267 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 SLC30A6Q6NXT4 461 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 RPUSD3Q6P087 351 aaKnown RBP3.21□□□□□ -1.9
PSPC1-208ENST00000635562 ALKBH5Q6P6C2 394 aaKnown RBP3.21□□□□□ -1.9
PSPC1-208ENST00000635562 SYCE2Q6PIF2 218 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 KCNV1Q6PIU1 500 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 RFX8Q6ZV50 586 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 TMPRSS9Q7Z410 1059 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 USP37Q86T82 979 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 LURAP1LQ8IV03 231 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 RHOT2Q8IXI1 618 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 MYOCDQ8IZQ8 938 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 MB21D1Q8N884 522 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 ANKRD52Q8NB46 1076 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 AVL9Q8NBF6 648 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 IPMKQ8NFU5 416 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 OR6B3Q8NGW1 331 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 TDRD7Q8NHU6 1098 aaKnown RBP3.21□□□□□ -1.9
PSPC1-208ENST00000635562 FBXO30Q8TB52 745 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 KIAA1524Q8TCG1 905 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 DENND1AQ8TEH3 1009 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 RUFY2Q8WXA3 655 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 ASB12Q8WXK4 309 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 DDX17Q92841 729 aaKnown RBP3.21□□□□□ -1.9
PSPC1-208ENST00000635562 ATP2A3Q93084 1043 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 NACC2Q96BF6 587 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 KIF1BPQ96EK5 621 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 CFAP36Q96G28 342 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 ZNF764Q96H86 408 aaPredicted RBP3.21□□□□□ -1.9
PSPC1-208ENST00000635562 MNTQ99583 582 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 SLF1Q9BQI6 1058 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 TMEM120AQ9BXJ8 343 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 TINAGL1Q9GZM7 467 aaPredicted RBP3.21□□□□□ -1.9
PSPC1-208ENST00000635562 EPC1Q9H2F5 836 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 GHITMQ9H3K2 345 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 TOR3AQ9H497 397 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 RIOX1Q9H6W3 641 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 TRPV5Q9NQA5 729 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 PAPOLBQ9NRJ5 636 aaKnown RBP3.21□□□□□ -1.9
PSPC1-208ENST00000635562 VPS45Q9NRW7 570 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 OLA1Q9NTK5 396 aaKnown RBP3.21□□□□□ -1.9
PSPC1-208ENST00000635562 MRPS18AQ9NVS2 196 aaKnown RBP3.21□□□□□ -1.9
PSPC1-208ENST00000635562 ZNHIT6Q9NWK9 470 aaKnown RBP3.21□□□□□ -1.9
PSPC1-208ENST00000635562 ETAA1Q9NY74 926 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 CDC23Q9UJX2 597 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 PADI4Q9UM07 663 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 TRAF3IP3Q9Y228 551 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 CHST2Q9Y4C5 530 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 PAXBP1Q9Y5B6 917 aa3.21□□□□□ -1.9
PSPC1-208ENST00000635562 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.21□□□□□ -1.9
PSPC1-208ENST00000635562 ZFP37Q9Y6Q3 630 aaPredicted RBP3.21□□□□□ -1.9
PSPC1-208ENST00000635562 FLT1P17948 1338 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 RSF1Q96T23 1441 aaPredicted RBP3.2□□□□□ -1.9
PSPC1-208ENST00000635562 LINC00854A0A1B0GVQ3 168 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 MBD3L4A6NDZ8 208 aaPredicted RBP3.2□□□□□ -1.9
PSPC1-208ENST00000635562 MBD3L3A6NE82 208 aaPredicted RBP3.2□□□□□ -1.9
PSPC1-208ENST00000635562 ZAR1LA6NP61 321 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 ZNF785A8K8V0 405 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 DIRC3C9JPN6 131 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 CAPN9O14815 690 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 KPNA5O15131 536 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 TRIM24O15164 1050 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 SLC7A4O43246 635 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 ZBTB43O43298 467 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 DOK2O60496 412 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 RPS6KA4O75676 772 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 URI1O94763 535 aaPredicted RBP3.2□□□□□ -1.9
PSPC1-208ENST00000635562 IL18RAPO95256 599 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 CSTBP04080 98 aaKnown RBP3.2□□□□□ -1.9
PSPC1-208ENST00000635562 PIM1P11309 404 aaPredicted RBP3.2□□□□□ -1.9
PSPC1-208ENST00000635562 BRAFP15056 766 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 ABCB4P21439 1286 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 CD9P21926 228 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 CD38P28907 300 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 HADHAP40939 763 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 LIFRP42702 1097 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 TUBP50607 506 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 ALDH3A2P51648 485 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 POU6F2P78424 691 aaPredicted RBP3.2□□□□□ -1.9
PSPC1-208ENST00000635562 ICA1Q05084 483 aa3.2□□□□□ -1.9
PSPC1-208ENST00000635562 CTBP1Q13363 440 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms