RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 RAD54BQ9Y620 910 aa13.16□□□□□ -0.3
SCN8A-209ENST00000627620 TBKBP1A7MCY6 615 aa13.16□□□□□ -0.3
SCN8A-209ENST00000627620 SLCO1B7G3V0H7 640 aa13.16□□□□□ -0.3
SCN8A-209ENST00000627620 CCDC159P0C7I6 412 aa13.16□□□□□ -0.3
SCN8A-209ENST00000627620 PCNAP12004 261 aa13.16□□□□□ -0.3
SCN8A-209ENST00000627620 DARSP14868 501 aaKnown RBP13.16□□□□□ -0.3
SCN8A-209ENST00000627620 NQO1P15559 274 aaKnown RBP13.16□□□□□ -0.3
SCN8A-209ENST00000627620 GRK3P35626 688 aa13.16□□□□□ -0.3
SCN8A-209ENST00000627620 RAB27AP51159 221 aa13.16□□□□□ -0.3
SCN8A-209ENST00000627620 POU6F1Q14863 301 aa13.16□□□□□ -0.3
SCN8A-209ENST00000627620 SLC27A1Q6PCB7 646 aa13.16□□□□□ -0.3
SCN8A-209ENST00000627620 PNMA5Q96PV4 448 aa13.16□□□□□ -0.3
SCN8A-209ENST00000627620 TSEN34Q9BSV6 310 aaKnown RBP13.16□□□□□ -0.3
SCN8A-209ENST00000627620 ABCA9Q8IUA7 1624 aa13.16□□□□□ -0.3
SCN8A-209ENST00000627620 FRMPD1Q5SYB0 1578 aa13.16□□□□□ -0.3
SCN8A-209ENST00000627620 MEGF6O75095 1541 aa13.16□□□□□ -0.3
SCN8A-209ENST00000627620 ACADSP16219 412 aa13.16□□□□□ -0.3
SCN8A-209ENST00000627620 HALP42357 657 aa13.16□□□□□ -0.3
SCN8A-209ENST00000627620 DEFA1P59665 94 aa13.16□□□□□ -0.3
SCN8A-209ENST00000627620 DEFA3P59666 94 aa13.16□□□□□ -0.3
SCN8A-209ENST00000627620 TBL3Q12788 808 aaKnown RBP13.16□□□□□ -0.3
SCN8A-209ENST00000627620 C3orf67Q6ZVT6 689 aa13.16□□□□□ -0.3
SCN8A-209ENST00000627620 ITIH5Q86UX2 942 aa13.16□□□□□ -0.3
SCN8A-209ENST00000627620 SPIRE2Q8WWL2 714 aa13.16□□□□□ -0.3
SCN8A-209ENST00000627620 CDK5RAP1Q96SZ6 601 aaKnown RBP13.16□□□□□ -0.3
SCN8A-209ENST00000627620 DCLK3Q9C098 648 aa13.16□□□□□ -0.3
SCN8A-209ENST00000627620 MAGEB16A2A368 324 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 ERI2A8K979 691 aaKnown RBP13.15□□□□□ -0.3
SCN8A-209ENST00000627620 GLI1P08151 1106 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 CKBP12277 381 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 SERPINB3P29508 390 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 PTENP60484 403 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 MRPS35P82673 323 aaKnown RBP13.15□□□□□ -0.3
SCN8A-209ENST00000627620 ZNF268Q14587 947 aaPredicted RBP13.15□□□□□ -0.3
SCN8A-209ENST00000627620 EARS2Q5JPH6 523 aaKnown RBP13.15□□□□□ -0.3
SCN8A-209ENST00000627620 MTDHQ86UE4 582 aaKnown RBP13.15□□□□□ -0.3
SCN8A-209ENST00000627620 NT5DC3Q86UY8 548 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 B3GALNT2Q8NCR0 500 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 CASP10Q92851 521 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 SLC5A5Q92911 643 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 UNKQ9C0B0 810 aaKnown RBP13.15□□□□□ -0.3
SCN8A-209ENST00000627620 UTP6Q9NYH9 597 aaKnown RBP13.15□□□□□ -0.3
SCN8A-209ENST00000627620 TUBGCP4Q9UGJ1 667 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 SPTLC1O15269 473 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 TM9SF1O15321 606 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 TCF3P15923 654 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 RRM2P31350 389 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 ALDH5A1P51649 535 aaPredicted RBP13.15□□□□□ -0.3
SCN8A-209ENST00000627620 TBX4P57082 545 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 EIF2B5Q13144 721 aaKnown RBP13.15□□□□□ -0.3
SCN8A-209ENST00000627620 MMRN1Q13201 1228 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 LRRC8DQ7L1W4 858 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 TFAP2DQ7Z6R9 452 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 ZNF614Q8N883 585 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 NDEL1Q9GZM8 345 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 ELOVL6Q9H5J4 265 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 CTNNAL1Q9UBT7 734 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 CAB39Q9Y376 341 aaPredicted RBP13.15□□□□□ -0.3
SCN8A-209ENST00000627620 PCDHB12Q9Y5F1 795 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 MICAL2O94851 1124 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 TPBGLP0DKB5 382 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 TPH1P17752 444 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 TRAPPC12Q8WVT3 735 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 TBCBQ99426 244 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 FBXO44Q9H4M3 255 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 TAGLN3Q9UI15 199 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 O00370 1275 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 SYNCRIPO60506 623 aaKnown RBP13.15□□□□□ -0.3
SCN8A-209ENST00000627620 DDNO94850 711 aaPredicted RBP13.15□□□□□ -0.3
SCN8A-209ENST00000627620 SERPINF2P08697 491 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 CORO7P57737 925 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 CYB5D1Q6P9G0 228 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 PPP1R10Q96QC0 940 aaKnown RBP13.15□□□□□ -0.3
SCN8A-209ENST00000627620 TMEM150BA6NC51 233 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 CXCL11O14625 94 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 PEX5P50542 639 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 YWHAZP63104 245 aaKnown RBP13.15□□□□□ -0.3
SCN8A-209ENST00000627620 CDH17Q12864 832 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 ITGA9Q13797 1035 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 RASA2Q15283 850 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 ZDHHC17Q8IUH5 632 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 MTMR8Q96EF0 704 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 OSGEPL1Q9H4B0 414 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 ASB7Q9H672 318 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 TMCC3Q9ULS5 477 aa13.15□□□□□ -0.3
SCN8A-209ENST00000627620 RAMP2O60895 175 aa13.14□□□□□ -0.31
SCN8A-209ENST00000627620 CALB2P22676 271 aa13.14□□□□□ -0.31
SCN8A-209ENST00000627620 MFSD10Q14728 455 aa13.14□□□□□ -0.31
SCN8A-209ENST00000627620 TMEM119Q4V9L6 283 aa13.14□□□□□ -0.31
SCN8A-209ENST00000627620 PDPK2PQ6A1A2 396 aa13.14□□□□□ -0.31
SCN8A-209ENST00000627620 SLC22A9Q8IVM8 553 aa13.14□□□□□ -0.31
SCN8A-209ENST00000627620 ZSWIM2Q8NEG5 633 aa13.14□□□□□ -0.31
SCN8A-209ENST00000627620 ACOX2Q99424 681 aa13.14□□□□□ -0.31
SCN8A-209ENST00000627620 BBS2Q9BXC9 721 aa13.14□□□□□ -0.31
SCN8A-209ENST00000627620 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.14□□□□□ -0.31
SCN8A-209ENST00000627620 RRN3Q9NYV6 651 aa13.14□□□□□ -0.31
SCN8A-209ENST00000627620 NAALADL1Q9UQQ1 740 aa13.14□□□□□ -0.31
SCN8A-209ENST00000627620 USP20Q9Y2K6 914 aa13.14□□□□□ -0.31
SCN8A-209ENST00000627620 USP32Q8NFA0 1604 aa13.14□□□□□ -0.31
SCN8A-209ENST00000627620 KANSL1LA0AUZ9 987 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms