RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 HOXC11O43248 304 aaPredicted RBP17.49■□□□□ 0.39
UBE3D-208ENST00000626828 PAPSS1O43252 624 aaPredicted RBP17.49■□□□□ 0.39
UBE3D-208ENST00000626828 STAT1P42224 750 aa17.49■□□□□ 0.39
UBE3D-208ENST00000626828 SLC6A11P48066 632 aa17.49■□□□□ 0.39
UBE3D-208ENST00000626828 HARS2P49590 506 aaKnown RBP17.49■□□□□ 0.39
UBE3D-208ENST00000626828 YWHAZP63104 245 aaKnown RBP17.49■□□□□ 0.39
UBE3D-208ENST00000626828 TPM4P67936 248 aa17.49■□□□□ 0.39
UBE3D-208ENST00000626828 PDCLQ13371 301 aa17.49■□□□□ 0.39
UBE3D-208ENST00000626828 TRIP4Q15650 581 aaPredicted RBP17.49■□□□□ 0.39
UBE3D-208ENST00000626828 MSANTD2Q6P1R3 559 aa17.49■□□□□ 0.39
UBE3D-208ENST00000626828 NUDT18Q6ZVK8 323 aa17.49■□□□□ 0.39
UBE3D-208ENST00000626828 TMEM35BQ8NCS4 154 aa17.49■□□□□ 0.39
UBE3D-208ENST00000626828 FAM149B1Q96BN6 582 aa17.49■□□□□ 0.39
UBE3D-208ENST00000626828 FAM126AQ9BYI3 521 aaPredicted RBP17.49■□□□□ 0.39
UBE3D-208ENST00000626828 NLRC4Q9NPP4 1024 aa17.49■□□□□ 0.39
UBE3D-208ENST00000626828 RTN4Q9NQC3 1192 aaKnown RBP17.49■□□□□ 0.39
UBE3D-208ENST00000626828 CHURC1-FNTBB4DL54 471 aa17.48■□□□□ 0.39
UBE3D-208ENST00000626828 CAPN9O14815 690 aa17.48■□□□□ 0.39
UBE3D-208ENST00000626828 APODP05090 189 aa17.48■□□□□ 0.39
UBE3D-208ENST00000626828 FYNP06241 537 aa17.48■□□□□ 0.39
UBE3D-208ENST00000626828 NCAM1P13591 858 aa17.48■□□□□ 0.39
UBE3D-208ENST00000626828 CORO1AP31146 461 aaKnown RBP17.48■□□□□ 0.39
UBE3D-208ENST00000626828 SOX5P35711 763 aa17.48■□□□□ 0.39
UBE3D-208ENST00000626828 NRLP54845 237 aa17.48■□□□□ 0.39
UBE3D-208ENST00000626828 EFHC1Q5JVL4 640 aa17.48■□□□□ 0.39
UBE3D-208ENST00000626828 NAIF1Q69YI7 327 aaPredicted RBP17.48■□□□□ 0.39
UBE3D-208ENST00000626828 TPGS1Q6ZTW0 290 aa17.48■□□□□ 0.39
UBE3D-208ENST00000626828 ZNF677Q86XU0 584 aa17.48■□□□□ 0.39
UBE3D-208ENST00000626828 DENND1CQ8IV53 801 aa17.48■□□□□ 0.39
UBE3D-208ENST00000626828 PASD1Q8IV76 773 aa17.48■□□□□ 0.39
UBE3D-208ENST00000626828 UNC45BQ8IWX7 931 aa17.48■□□□□ 0.39
UBE3D-208ENST00000626828 XPO6Q96QU8 1125 aaKnown RBP17.48■□□□□ 0.39
UBE3D-208ENST00000626828 CPXM1Q96SM3 734 aa17.48■□□□□ 0.39
UBE3D-208ENST00000626828 BBS2Q9BXC9 721 aa17.48■□□□□ 0.39
UBE3D-208ENST00000626828 MARK1Q9P0L2 795 aa17.48■□□□□ 0.39
UBE3D-208ENST00000626828 DEC1Q9P2X7 70 aa17.48■□□□□ 0.39
UBE3D-208ENST00000626828 AGO1Q9UL18 857 aaKnown RBP17.48■□□□□ 0.39
UBE3D-208ENST00000626828 PTPRZ1P23471 2315 aaPredicted RBP17.48■□□□□ 0.39
UBE3D-208ENST00000626828 GFPT2O94808 682 aa17.47■□□□□ 0.39
UBE3D-208ENST00000626828 GLI1P08151 1106 aa17.47■□□□□ 0.39
UBE3D-208ENST00000626828 CDH5P33151 784 aaPredicted RBP17.47■□□□□ 0.39
UBE3D-208ENST00000626828 NBL1P41271 181 aa17.47■□□□□ 0.39
UBE3D-208ENST00000626828 GRIA2P42262 883 aa17.47■□□□□ 0.39
UBE3D-208ENST00000626828 TNFRSF4P43489 277 aa17.47■□□□□ 0.39
UBE3D-208ENST00000626828 JAM2P57087 298 aa17.47■□□□□ 0.39
UBE3D-208ENST00000626828 ZSCAN23Q3MJ62 389 aa17.47■□□□□ 0.39
UBE3D-208ENST00000626828 Q6ZS52 159 aa17.47■□□□□ 0.39
UBE3D-208ENST00000626828 NAT16Q8N8M0 369 aa17.47■□□□□ 0.39
UBE3D-208ENST00000626828 C1orf131Q8NDD1 294 aaKnown RBP17.47■□□□□ 0.39
UBE3D-208ENST00000626828 DDX1Q92499 740 aaKnown RBP17.47■□□□□ 0.39
UBE3D-208ENST00000626828 SYNCQ9H7C4 482 aa17.47■□□□□ 0.39
UBE3D-208ENST00000626828 POPDC2Q9HBU9 364 aa17.47■□□□□ 0.39
UBE3D-208ENST00000626828 CBX8Q9HC52 389 aa17.47■□□□□ 0.39
UBE3D-208ENST00000626828 PRMT8Q9NR22 394 aaPredicted RBP17.47■□□□□ 0.39
UBE3D-208ENST00000626828 ARHGEF4Q9NR80 690 aa17.47■□□□□ 0.39
UBE3D-208ENST00000626828 FAM86C1Q9NVL1 165 aa17.47■□□□□ 0.39
UBE3D-208ENST00000626828 ASNSD1Q9NWL6 643 aa17.47■□□□□ 0.39
UBE3D-208ENST00000626828 NAALADL1Q9UQQ1 740 aa17.47■□□□□ 0.39
UBE3D-208ENST00000626828 RIF1Q5UIP0 2472 aaKnown RBP17.47■□□□□ 0.39
UBE3D-208ENST00000626828 PROB1E7EW31 1015 aa17.46■□□□□ 0.39
UBE3D-208ENST00000626828 K7EQS6 105 aa17.46■□□□□ 0.39
UBE3D-208ENST00000626828 EPHB6O15197 1021 aa17.46■□□□□ 0.39
UBE3D-208ENST00000626828 TEX33O43247 280 aa17.46■□□□□ 0.39
UBE3D-208ENST00000626828 RNF40O75150 1001 aa17.46■□□□□ 0.39
UBE3D-208ENST00000626828 TULP3O75386 442 aa17.46■□□□□ 0.39
UBE3D-208ENST00000626828 KAT7O95251 611 aa17.46■□□□□ 0.39
UBE3D-208ENST00000626828 PAPSS2O95340 614 aaPredicted RBP17.46■□□□□ 0.39
UBE3D-208ENST00000626828 LATS1O95835 1130 aa17.46■□□□□ 0.39
UBE3D-208ENST00000626828 TYRP14679 529 aa17.46■□□□□ 0.39
UBE3D-208ENST00000626828 TBX4P57082 545 aa17.46■□□□□ 0.39
UBE3D-208ENST00000626828 RING1Q06587 406 aa17.46■□□□□ 0.39
UBE3D-208ENST00000626828 TAF3Q5VWG9 929 aa17.46■□□□□ 0.39
UBE3D-208ENST00000626828 OR6B2Q6IFH4 312 aa17.46■□□□□ 0.39
UBE3D-208ENST00000626828 ZC3H14Q6PJT7 736 aaKnown RBP17.46■□□□□ 0.39
UBE3D-208ENST00000626828 NOP9Q86U38 636 aaKnown RBP17.46■□□□□ 0.39
UBE3D-208ENST00000626828 ZDHHC17Q8IUH5 632 aa17.46■□□□□ 0.39
UBE3D-208ENST00000626828 ETFBKMTQ8IXQ9 262 aa17.46■□□□□ 0.39
UBE3D-208ENST00000626828 CPXM2Q8N436 756 aa17.46■□□□□ 0.39
UBE3D-208ENST00000626828 IPO4Q8TEX9 1081 aaKnown RBP17.46■□□□□ 0.39
UBE3D-208ENST00000626828 AZIN2Q96A70 460 aa17.46■□□□□ 0.39
UBE3D-208ENST00000626828 SEMA4AQ9H3S1 761 aa17.46■□□□□ 0.39
UBE3D-208ENST00000626828 TBC1D3BA6NDS4 549 aa17.45■□□□□ 0.38
UBE3D-208ENST00000626828 NEDD8-MDP1E9PL57 170 aa17.45■□□□□ 0.38
UBE3D-208ENST00000626828 LSM8O95777 96 aaKnown RBP17.45■□□□□ 0.38
UBE3D-208ENST00000626828 SERPINC1P01008 464 aa17.45■□□□□ 0.38
UBE3D-208ENST00000626828 CYBBP04839 570 aa17.45■□□□□ 0.38
UBE3D-208ENST00000626828 MRPS21P82921 87 aaKnown RBP17.45■□□□□ 0.38
UBE3D-208ENST00000626828 SATB1Q01826 763 aa17.45■□□□□ 0.38
UBE3D-208ENST00000626828 SLC6A3Q01959 620 aa17.45■□□□□ 0.38
UBE3D-208ENST00000626828 NNTQ13423 1086 aa17.45■□□□□ 0.38
UBE3D-208ENST00000626828 ADGRF1Q5T601 910 aa17.45■□□□□ 0.38
UBE3D-208ENST00000626828 SYPL2Q5VXT5 272 aa17.45■□□□□ 0.38
UBE3D-208ENST00000626828 NUGGCQ68CJ6 796 aa17.45■□□□□ 0.38
UBE3D-208ENST00000626828 CACNA2D4Q7Z3S7 1137 aa17.45■□□□□ 0.38
UBE3D-208ENST00000626828 C12orf40Q86WS4 652 aa17.45■□□□□ 0.38
UBE3D-208ENST00000626828 ERICH1Q86X53 443 aa17.45■□□□□ 0.38
UBE3D-208ENST00000626828 EPS8L1Q8TE68 723 aa17.45■□□□□ 0.38
UBE3D-208ENST00000626828 DQX1Q8TE96 717 aaKnown RBP17.45■□□□□ 0.38
UBE3D-208ENST00000626828 ATRIPQ8WXE1 791 aa17.45■□□□□ 0.38
UBE3D-208ENST00000626828 EZH1Q92800 747 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms