RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 PNMA8BQ9ULN7 279 aaPredicted RBP6.47□□□□□ -1.37
CDKL5-205ENST00000623535 MGAT4AQ9UM21 535 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 STAU1O95793 577 aaKnown RBP6.47□□□□□ -1.37
CDKL5-205ENST00000623535 SARM1Q6SZW1 724 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 KCTD17Q8N5Z5 321 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 CLMNQ96JQ2 1002 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 CDADC1Q9BWV3 514 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 TRPV2Q9Y5S1 764 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 PZPP20742 1482 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 NR3C2P08235 984 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 NRLP54845 237 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 SRP54P61011 504 aaKnown RBP6.47□□□□□ -1.37
CDKL5-205ENST00000623535 SPARCL1Q14515 664 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 LONRF1Q17RB8 773 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 CDC73Q6P1J9 531 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 TRAPPC5Q8IUR0 188 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 P3H2Q8IVL5 708 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 CLIP3Q96DZ5 547 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 CORO1BQ9BR76 489 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.47□□□□□ -1.37
CDKL5-205ENST00000623535 PHTF1Q9UMS5 762 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 ANKDD1BA6NHY2 528 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 CSH1P0DML2 217 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 CSH2P0DML3 217 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 PIK3CGP48736 1102 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 GTF2A1P52655 376 aaPredicted RBP6.47□□□□□ -1.37
CDKL5-205ENST00000623535 PIGHQ14442 188 aaPredicted RBP6.47□□□□□ -1.37
CDKL5-205ENST00000623535 PCBP1Q15365 356 aaKnown RBP eCLIP6.47□□□□□ -1.37
CDKL5-205ENST00000623535 KLHL40Q2TBA0 621 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 GRAMD4Q6IC98 578 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 FAM171BQ6P995 826 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 OR5T3Q8NGG3 340 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 WDR36Q8NI36 951 aaKnown RBP6.47□□□□□ -1.37
CDKL5-205ENST00000623535 CBX4O00257 560 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 MYBP10242 640 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 CHMLP26374 656 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 CARTPTQ16568 116 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 RHOT1Q8IXI2 618 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 ICA1LQ8NDH6 482 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 CLDN4O14493 209 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 DDX3YO15523 660 aaKnown RBP6.47□□□□□ -1.37
CDKL5-205ENST00000623535 SGTAO43765 313 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 VEGFDO43915 354 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 PLD3Q8IV08 490 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 HERVK_113Q902F9 699 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 TMA16Q96EY4 203 aaKnown RBP6.47□□□□□ -1.37
CDKL5-205ENST00000623535 SPATA6Q9NWH7 488 aaPredicted RBP6.47□□□□□ -1.37
CDKL5-205ENST00000623535 GPRC5DQ9NZD1 345 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 GRIN2DO15399 1336 aa6.47□□□□□ -1.37
CDKL5-205ENST00000623535 SPAG7O75391 227 aa6.46□□□□□ -1.37
CDKL5-205ENST00000623535 STX11O75558 287 aa6.46□□□□□ -1.37
CDKL5-205ENST00000623535 POLBP06746 335 aa6.46□□□□□ -1.37
CDKL5-205ENST00000623535 CBSLP0DN79 551 aa6.46□□□□□ -1.37
CDKL5-205ENST00000623535 TFPIP10646 304 aa6.46□□□□□ -1.37
CDKL5-205ENST00000623535 GJA1P17302 382 aa6.46□□□□□ -1.37
CDKL5-205ENST00000623535 CBSP35520 551 aa6.46□□□□□ -1.37
CDKL5-205ENST00000623535 FEN1P39748 380 aaKnown RBP6.46□□□□□ -1.37
CDKL5-205ENST00000623535 ESCO2Q56NI9 601 aa6.46□□□□□ -1.37
CDKL5-205ENST00000623535 L3MBTL4Q8NA19 623 aa6.46□□□□□ -1.37
CDKL5-205ENST00000623535 USP38Q8NB14 1042 aa6.46□□□□□ -1.37
CDKL5-205ENST00000623535 METTL6Q8TCB7 284 aa6.46□□□□□ -1.37
CDKL5-205ENST00000623535 ATL1Q8WXF7 558 aa6.46□□□□□ -1.37
CDKL5-205ENST00000623535 GPRASP2Q96D09 838 aa6.46□□□□□ -1.37
CDKL5-205ENST00000623535 HIPK3Q9H422 1215 aa6.46□□□□□ -1.37
CDKL5-205ENST00000623535 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.46□□□□□ -1.37
CDKL5-205ENST00000623535 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.46□□□□□ -1.37
CDKL5-205ENST00000623535 TNS3Q68CZ2 1445 aa6.46□□□□□ -1.37
CDKL5-205ENST00000623535 PDS5AQ29RF7 1337 aaKnown RBP6.46□□□□□ -1.37
CDKL5-205ENST00000623535 UMODL1Q5DID0 1318 aa6.46□□□□□ -1.37
CDKL5-205ENST00000623535 CHP2O43745 196 aa6.46□□□□□ -1.37
CDKL5-205ENST00000623535 IL1BP01584 269 aa6.46□□□□□ -1.37
CDKL5-205ENST00000623535 FTLP02792 175 aaPredicted RBP6.46□□□□□ -1.37
CDKL5-205ENST00000623535 MTHFD1P11586 935 aaKnown RBP6.46□□□□□ -1.37
CDKL5-205ENST00000623535 DCKP27707 260 aa6.46□□□□□ -1.37
CDKL5-205ENST00000623535 STX3Q13277 289 aa6.46□□□□□ -1.37
CDKL5-205ENST00000623535 UBE2SQ16763 222 aa6.46□□□□□ -1.37
CDKL5-205ENST00000623535 SYT10Q6XYQ8 523 aa6.46□□□□□ -1.37
CDKL5-205ENST00000623535 DCTPP1Q9H773 170 aa6.46□□□□□ -1.37
CDKL5-205ENST00000623535 PHPT1Q9NRX4 125 aaPredicted RBP6.46□□□□□ -1.37
CDKL5-205ENST00000623535 ARHGAP28Q9P2N2 729 aa6.46□□□□□ -1.37
CDKL5-205ENST00000623535 TMX2-CTNND1H3BSU7 103 aa6.46□□□□□ -1.37
CDKL5-205ENST00000623535 NR2C1P13056 603 aa6.46□□□□□ -1.37
CDKL5-205ENST00000623535 RPA3P35244 121 aaPredicted RBP6.46□□□□□ -1.37
CDKL5-205ENST00000623535 SLC1A1P43005 524 aa6.46□□□□□ -1.37
CDKL5-205ENST00000623535 GUCY2FP51841 1108 aa6.46□□□□□ -1.37
CDKL5-205ENST00000623535 ACTR1AP61163 376 aa6.46□□□□□ -1.37
CDKL5-205ENST00000623535 ADGRF2Q8IZF7 708 aa6.46□□□□□ -1.37
CDKL5-205ENST00000623535 FSTL5Q8N475 847 aaPredicted RBP6.46□□□□□ -1.37
CDKL5-205ENST00000623535 OR52L1Q8NGH7 329 aa6.46□□□□□ -1.37
CDKL5-205ENST00000623535 FRS2Q8WU20 508 aa6.46□□□□□ -1.37
CDKL5-205ENST00000623535 TMX2Q9Y320 296 aa6.46□□□□□ -1.37
CDKL5-205ENST00000623535 KIF21AQ7Z4S6 1674 aa6.46□□□□□ -1.38
CDKL5-205ENST00000623535 FOSL2P15408 326 aa6.46□□□□□ -1.38
CDKL5-205ENST00000623535 HPCAL1P37235 193 aa6.46□□□□□ -1.38
CDKL5-205ENST00000623535 ALDH5A1P51649 535 aaPredicted RBP6.46□□□□□ -1.38
CDKL5-205ENST00000623535 ATP13A5Q4VNC0 1218 aa6.46□□□□□ -1.38
CDKL5-205ENST00000623535 KRT73Q86Y46 540 aa6.46□□□□□ -1.38
CDKL5-205ENST00000623535 BLOC1S5Q8TDH9 187 aa6.46□□□□□ -1.38
CDKL5-205ENST00000623535 SMG7Q92540 1137 aaKnown RBP6.46□□□□□ -1.38
CDKL5-205ENST00000623535 HPDLQ96IR7 371 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms