RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 GPD1P21695 349 aa20.7■□□□□ 0.9
PDLIM2-221ENST00000622702 PTPN9P43378 593 aa20.7■□□□□ 0.9
PDLIM2-221ENST00000622702 ZNF143P52747 638 aaPredicted RBP20.7■□□□□ 0.9
PDLIM2-221ENST00000622702 OGDHQ02218 1023 aa20.7■□□□□ 0.9
PDLIM2-221ENST00000622702 TEAD2Q15562 447 aa20.7■□□□□ 0.9
PDLIM2-221ENST00000622702 SLC25A52Q3SY17 297 aa20.7■□□□□ 0.9
PDLIM2-221ENST00000622702 RSRC2Q7L4I2 434 aaKnown RBP20.7■□□□□ 0.9
PDLIM2-221ENST00000622702 NPY6RQ99463 290 aa20.7■□□□□ 0.9
PDLIM2-221ENST00000622702 LCMT1Q9UIC8 334 aa20.7■□□□□ 0.9
PDLIM2-221ENST00000622702 ANAPC7Q9UJX3 599 aa20.7■□□□□ 0.9
PDLIM2-221ENST00000622702 C2orf78A6NCI8 922 aa20.69■□□□□ 0.9
PDLIM2-221ENST00000622702 ASGR2P07307 311 aa20.69■□□□□ 0.9
PDLIM2-221ENST00000622702 SDC4P31431 198 aa20.69■□□□□ 0.9
PDLIM2-221ENST00000622702 CCDC14Q49A88 953 aa20.69■□□□□ 0.9
PDLIM2-221ENST00000622702 C10orf120Q5SQS8 335 aa20.69■□□□□ 0.9
PDLIM2-221ENST00000622702 TXNDC8Q6A555 127 aa20.69■□□□□ 0.9
PDLIM2-221ENST00000622702 DQX1Q8TE96 717 aaKnown RBP20.69■□□□□ 0.9
PDLIM2-221ENST00000622702 CNPY3Q9BT09 278 aa20.69■□□□□ 0.9
PDLIM2-221ENST00000622702 SMOC2Q9H3U7 446 aa20.69■□□□□ 0.9
PDLIM2-221ENST00000622702 TASP1Q9H6P5 420 aa20.69■□□□□ 0.9
PDLIM2-221ENST00000622702 KCND1Q9NSA2 647 aa20.69■□□□□ 0.9
PDLIM2-221ENST00000622702 TRIM10Q9UDY6 481 aa20.69■□□□□ 0.9
PDLIM2-221ENST00000622702 MUTYHQ9UIF7 546 aa20.69■□□□□ 0.9
PDLIM2-221ENST00000622702 MYO10Q9HD67 2058 aa20.69■□□□□ 0.9
PDLIM2-221ENST00000622702 MYO1FO00160 1098 aa20.69■□□□□ 0.9
PDLIM2-221ENST00000622702 COCHO43405 550 aa20.69■□□□□ 0.9
PDLIM2-221ENST00000622702 IGLV3-25P01717 112 aa20.69■□□□□ 0.9
PDLIM2-221ENST00000622702 ATP5C1P36542 298 aaKnown RBP20.69■□□□□ 0.9
PDLIM2-221ENST00000622702 NOP2P46087 812 aaKnown RBP20.69■□□□□ 0.9
PDLIM2-221ENST00000622702 ZNF252P-AS1Q0IIN9 211 aa20.69■□□□□ 0.9
PDLIM2-221ENST00000622702 GPR158Q5T848 1215 aa20.69■□□□□ 0.9
PDLIM2-221ENST00000622702 POTEHQ6S545 545 aa20.69■□□□□ 0.9
PDLIM2-221ENST00000622702 BNIPLQ7Z465 357 aa20.69■□□□□ 0.9
PDLIM2-221ENST00000622702 REXO1L1PQ8IX06 675 aa20.69■□□□□ 0.9
PDLIM2-221ENST00000622702 RNF10Q8N5U6 811 aaKnown RBP20.69■□□□□ 0.9
PDLIM2-221ENST00000622702 ST13P5Q8NFI4 369 aaPredicted RBP20.69■□□□□ 0.9
PDLIM2-221ENST00000622702 KIAA1524Q8TCG1 905 aa20.69■□□□□ 0.9
PDLIM2-221ENST00000622702 PGAP3Q96FM1 320 aaPredicted RBP20.69■□□□□ 0.9
PDLIM2-221ENST00000622702 CFAP57Q96MR6 1250 aa20.69■□□□□ 0.9
PDLIM2-221ENST00000622702 SLC46A2Q9BY10 475 aa20.69■□□□□ 0.9
PDLIM2-221ENST00000622702 GDE1Q9NZC3 331 aa20.69■□□□□ 0.9
PDLIM2-221ENST00000622702 IP6K2Q9UHH9 426 aa20.69■□□□□ 0.9
PDLIM2-221ENST00000622702 DNMT3LQ9UJW3 386 aa20.69■□□□□ 0.9
PDLIM2-221ENST00000622702 NUDT5Q9UKK9 219 aa20.69■□□□□ 0.9
PDLIM2-221ENST00000622702 TRAV19A0A0A6YYK7 116 aa20.68■□□□□ 0.9
PDLIM2-221ENST00000622702 CCP110O43303 1012 aa20.68■□□□□ 0.9
PDLIM2-221ENST00000622702 TBX18O95935 607 aa20.68■□□□□ 0.9
PDLIM2-221ENST00000622702 HDCP19113 662 aa20.68■□□□□ 0.9
PDLIM2-221ENST00000622702 PITX1P78337 314 aaPredicted RBP20.68■□□□□ 0.9
PDLIM2-221ENST00000622702 ARHGAP29Q52LW3 1261 aa20.68■□□□□ 0.9
PDLIM2-221ENST00000622702 STXBP5Q5T5C0 1151 aa20.68■□□□□ 0.9
PDLIM2-221ENST00000622702 OTUD1Q5VV17 481 aaPredicted RBP20.68■□□□□ 0.9
PDLIM2-221ENST00000622702 TAC4Q86UU9 113 aa20.68■□□□□ 0.9
PDLIM2-221ENST00000622702 CCAR2Q8N163 923 aaKnown RBP20.68■□□□□ 0.9
PDLIM2-221ENST00000622702 NIPA2Q8N8Q9 360 aa20.68■□□□□ 0.9
PDLIM2-221ENST00000622702 MAB21L3Q8N8X9 362 aa20.68■□□□□ 0.9
PDLIM2-221ENST00000622702 CENPIQ92674 756 aaPredicted RBP20.68■□□□□ 0.9
PDLIM2-221ENST00000622702 RNF38Q9H0F5 515 aa20.68■□□□□ 0.9
PDLIM2-221ENST00000622702 KCNK12Q9HB15 430 aa20.68■□□□□ 0.9
PDLIM2-221ENST00000622702 TRPC7Q9HCX4 862 aa20.68■□□□□ 0.9
PDLIM2-221ENST00000622702 TMEM51Q9NW97 253 aa20.68■□□□□ 0.9
PDLIM2-221ENST00000622702 MARCH2Q9P0N8 246 aa20.68■□□□□ 0.9
PDLIM2-221ENST00000622702 ZKSCAN5Q9Y2L8 839 aa20.68■□□□□ 0.9
PDLIM2-221ENST00000622702 ENDOD1O94919 500 aa20.67■□□□□ 0.9
PDLIM2-221ENST00000622702 TRUB2O95900 331 aaKnown RBP20.67■□□□□ 0.9
PDLIM2-221ENST00000622702 PSMA2P25787 234 aa20.67■□□□□ 0.9
PDLIM2-221ENST00000622702 DEKP35659 375 aaKnown RBP20.67■□□□□ 0.9
PDLIM2-221ENST00000622702 SULT1E1P49888 294 aa20.67■□□□□ 0.9
PDLIM2-221ENST00000622702 EFEMP1Q12805 493 aa20.67■□□□□ 0.9
PDLIM2-221ENST00000622702 NNTQ13423 1086 aa20.67■□□□□ 0.9
PDLIM2-221ENST00000622702 EIF4EBP2Q13542 120 aaPredicted RBP20.67■□□□□ 0.9
PDLIM2-221ENST00000622702 PIGHQ14442 188 aaPredicted RBP20.67■□□□□ 0.9
PDLIM2-221ENST00000622702 ACAP1Q15027 740 aa20.67■□□□□ 0.9
PDLIM2-221ENST00000622702 IFI16Q16666 785 aaKnown RBP20.67■□□□□ 0.9
PDLIM2-221ENST00000622702 STRADAQ7RTN6 431 aa20.67■□□□□ 0.9
PDLIM2-221ENST00000622702 ARL14EPQ8N8R7 260 aaPredicted RBP20.67■□□□□ 0.9
PDLIM2-221ENST00000622702 TPCN2Q8NHX9 752 aa20.67■□□□□ 0.9
PDLIM2-221ENST00000622702 RSAD2Q8WXG1 361 aa20.67■□□□□ 0.9
PDLIM2-221ENST00000622702 BTBD6Q96KE9 485 aa20.67■□□□□ 0.9
PDLIM2-221ENST00000622702 ZSWIM3Q96MP5 696 aa20.67■□□□□ 0.9
PDLIM2-221ENST00000622702 SERPINB11Q96P15 392 aa20.67■□□□□ 0.9
PDLIM2-221ENST00000622702 SLC22A12Q96S37 553 aa20.67■□□□□ 0.9
PDLIM2-221ENST00000622702 TBCBQ99426 244 aa20.67■□□□□ 0.9
PDLIM2-221ENST00000622702 ADAM33Q9BZ11 813 aa20.67■□□□□ 0.9
PDLIM2-221ENST00000622702 NACA2Q9H009 215 aa20.67■□□□□ 0.9
PDLIM2-221ENST00000622702 SLITRK6Q9H5Y7 841 aa20.67■□□□□ 0.9
PDLIM2-221ENST00000622702 LZTFL1Q9NQ48 299 aa20.67■□□□□ 0.9
PDLIM2-221ENST00000622702 IGSF9Q9P2J2 1179 aa20.67■□□□□ 0.9
PDLIM2-221ENST00000622702 MACROD2A1Z1Q3 448 aa20.66■□□□□ 0.9
PDLIM2-221ENST00000622702 GOLGA6L9A6NEM1 432 aa20.66■□□□□ 0.9
PDLIM2-221ENST00000622702 ANHXE9PGG2 379 aa20.66■□□□□ 0.9
PDLIM2-221ENST00000622702 M0QYT0 321 aa20.66■□□□□ 0.9
PDLIM2-221ENST00000622702 MDM4O15151 490 aa20.66■□□□□ 0.9
PDLIM2-221ENST00000622702 BUB1O43683 1085 aa20.66■□□□□ 0.9
PDLIM2-221ENST00000622702 PROSCO94903 275 aa20.66■□□□□ 0.9
PDLIM2-221ENST00000622702 DESP17661 470 aa20.66■□□□□ 0.9
PDLIM2-221ENST00000622702 TFE3P19532 575 aaPredicted RBP20.66■□□□□ 0.9
PDLIM2-221ENST00000622702 WEE1P30291 646 aa20.66■□□□□ 0.9
PDLIM2-221ENST00000622702 SLC7A9P82251 487 aa20.66■□□□□ 0.9
PDLIM2-221ENST00000622702 HTR4Q13639 388 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms