RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 TMC8Q8IU68 726 aa18.55■□□□□ 0.56
PTCHD3-202ENST00000622555 VN1R2Q8NFZ6 395 aa18.55■□□□□ 0.56
PTCHD3-202ENST00000622555 PEBP4Q96S96 227 aa18.55■□□□□ 0.56
PTCHD3-202ENST00000622555 CDK5RAP1Q96SZ6 601 aaKnown RBP18.55■□□□□ 0.56
PTCHD3-202ENST00000622555 LRRC3Q9BY71 257 aa18.55■□□□□ 0.56
PTCHD3-202ENST00000622555 IL21Q9HBE4 155 aa18.55■□□□□ 0.56
PTCHD3-202ENST00000622555 HCFC1R1Q9NWW0 138 aa18.55■□□□□ 0.56
PTCHD3-202ENST00000622555 PRRC2BQ5JSZ5 2229 aaKnown RBP18.55■□□□□ 0.56
PTCHD3-202ENST00000622555 MDM4O15151 490 aa18.54■□□□□ 0.56
PTCHD3-202ENST00000622555 MSI1O43347 362 aaKnown RBP18.54■□□□□ 0.56
PTCHD3-202ENST00000622555 TBX18O95935 607 aa18.54■□□□□ 0.56
PTCHD3-202ENST00000622555 IGLV3-25P01717 112 aa18.54■□□□□ 0.56
PTCHD3-202ENST00000622555 MYL4P12829 197 aa18.54■□□□□ 0.56
PTCHD3-202ENST00000622555 PRLRP16471 622 aa18.54■□□□□ 0.56
PTCHD3-202ENST00000622555 GABRR2P28476 465 aa18.54■□□□□ 0.56
PTCHD3-202ENST00000622555 ATP13A4Q4VNC1 1196 aa18.54■□□□□ 0.56
PTCHD3-202ENST00000622555 HECTD3Q5T447 861 aa18.54■□□□□ 0.56
PTCHD3-202ENST00000622555 TADA2BQ86TJ2 420 aa18.54■□□□□ 0.56
PTCHD3-202ENST00000622555 TSC1Q92574 1164 aa18.54■□□□□ 0.56
PTCHD3-202ENST00000622555 ACSF2Q96CM8 615 aaPredicted RBP18.54■□□□□ 0.56
PTCHD3-202ENST00000622555 SERPINB11Q96P15 392 aa18.54■□□□□ 0.56
PTCHD3-202ENST00000622555 GCNAQ96QF7 691 aa18.54■□□□□ 0.56
PTCHD3-202ENST00000622555 PRKD2Q9BZL6 878 aa18.54■□□□□ 0.56
PTCHD3-202ENST00000622555 NACA2Q9H009 215 aa18.54■□□□□ 0.56
PTCHD3-202ENST00000622555 KLHL11Q9NVR0 708 aa18.54■□□□□ 0.56
PTCHD3-202ENST00000622555 RASAL2Q9UJF2 1139 aa18.54■□□□□ 0.56
PTCHD3-202ENST00000622555 CCDC195A0A1B0GUA6 201 aa18.54■□□□□ 0.56
PTCHD3-202ENST00000622555 IRAK2O43187 625 aa18.54■□□□□ 0.56
PTCHD3-202ENST00000622555 PTPN2P17706 415 aa18.54■□□□□ 0.56
PTCHD3-202ENST00000622555 HYAL1Q12794 435 aa18.54■□□□□ 0.56
PTCHD3-202ENST00000622555 KCNC3Q14003 757 aa18.54■□□□□ 0.56
PTCHD3-202ENST00000622555 GRIN2CQ14957 1233 aa18.54■□□□□ 0.56
PTCHD3-202ENST00000622555 KCNT1Q5JUK3 1230 aa18.54■□□□□ 0.56
PTCHD3-202ENST00000622555 PRPF38BQ5VTL8 546 aaKnown RBP18.54■□□□□ 0.56
PTCHD3-202ENST00000622555 DCAF12L1Q5VU92 463 aa18.54■□□□□ 0.56
PTCHD3-202ENST00000622555 GAREM2Q75VX8 874 aa18.54■□□□□ 0.56
PTCHD3-202ENST00000622555 KATNAL2Q8IYT4 538 aa18.54■□□□□ 0.56
PTCHD3-202ENST00000622555 COG1Q8WTW3 980 aa18.54■□□□□ 0.56
PTCHD3-202ENST00000622555 HSPH1Q92598 858 aa18.54■□□□□ 0.56
PTCHD3-202ENST00000622555 RNF34Q969K3 372 aa18.54■□□□□ 0.56
PTCHD3-202ENST00000622555 WDR6Q9NNW5 1121 aaKnown RBP18.54■□□□□ 0.56
PTCHD3-202ENST00000622555 DDX56Q9NY93 547 aaKnown RBP18.54■□□□□ 0.56
PTCHD3-202ENST00000622555 LMCD1Q9NZU5 365 aa18.54■□□□□ 0.56
PTCHD3-202ENST00000622555 MARCH2Q9P0N8 246 aa18.54■□□□□ 0.56
PTCHD3-202ENST00000622555 SOX1O00570 391 aaPredicted RBP18.53■□□□□ 0.56
PTCHD3-202ENST00000622555 ZNF185O15231 689 aa18.53■□□□□ 0.56
PTCHD3-202ENST00000622555 KRT1P04264 644 aa18.53■□□□□ 0.56
PTCHD3-202ENST00000622555 RARAP10276 462 aa18.53■□□□□ 0.56
PTCHD3-202ENST00000622555 CDC25CP30307 473 aa18.53■□□□□ 0.56
PTCHD3-202ENST00000622555 ATP5C1P36542 298 aaKnown RBP18.53■□□□□ 0.56
PTCHD3-202ENST00000622555 TUBP50607 506 aa18.53■□□□□ 0.56
PTCHD3-202ENST00000622555 ZNF211Q13398 564 aaPredicted RBP18.53■□□□□ 0.56
PTCHD3-202ENST00000622555 BOLA3Q53S33 107 aa18.53■□□□□ 0.56
PTCHD3-202ENST00000622555 ODF2Q5BJF6 829 aa18.53■□□□□ 0.56
PTCHD3-202ENST00000622555 CYP4V2Q6ZWL3 525 aaPredicted RBP18.53■□□□□ 0.56
PTCHD3-202ENST00000622555 MIB1Q86YT6 1006 aa18.53■□□□□ 0.56
PTCHD3-202ENST00000622555 ZNF276Q8N554 614 aa18.53■□□□□ 0.56
PTCHD3-202ENST00000622555 CCDC185Q8N715 623 aa18.53■□□□□ 0.56
PTCHD3-202ENST00000622555 C12orf76Q8N812 135 aaPredicted RBP18.53■□□□□ 0.56
PTCHD3-202ENST00000622555 ANKRD7Q92527 254 aa18.53■□□□□ 0.56
PTCHD3-202ENST00000622555 MRPS31Q92665 395 aaKnown RBP18.53■□□□□ 0.56
PTCHD3-202ENST00000622555 PBKQ96KB5 322 aa18.53■□□□□ 0.56
PTCHD3-202ENST00000622555 CARD9Q9H257 536 aa18.53■□□□□ 0.56
PTCHD3-202ENST00000622555 SFXN1Q9H9B4 322 aa18.53■□□□□ 0.56
PTCHD3-202ENST00000622555 TRPC7Q9HCX4 862 aa18.53■□□□□ 0.56
PTCHD3-202ENST00000622555 DZANK1Q9NVP4 752 aa18.53■□□□□ 0.56
PTCHD3-202ENST00000622555 DNMT3BQ9UBC3 853 aaKnown RBP18.53■□□□□ 0.56
PTCHD3-202ENST00000622555 NOTCH4Q99466 2003 aa18.53■□□□□ 0.56
PTCHD3-202ENST00000622555 C2orf78A6NCI8 922 aa18.52■□□□□ 0.56
PTCHD3-202ENST00000622555 FGF19O95750 216 aa18.52■□□□□ 0.56
PTCHD3-202ENST00000622555 POU2F2P09086 479 aa18.52■□□□□ 0.56
PTCHD3-202ENST00000622555 CXCR3P49682 368 aa18.52■□□□□ 0.56
PTCHD3-202ENST00000622555 CYP4F8P98187 520 aa18.52■□□□□ 0.56
PTCHD3-202ENST00000622555 ERMARDQ5T6L9 678 aa18.52■□□□□ 0.56
PTCHD3-202ENST00000622555 EFHBQ8N7U6 833 aa18.52■□□□□ 0.56
PTCHD3-202ENST00000622555 TEKT4Q8WW24 435 aa18.52■□□□□ 0.56
PTCHD3-202ENST00000622555 ZNF707Q96C28 371 aaPredicted RBP18.52■□□□□ 0.56
PTCHD3-202ENST00000622555 CAPZA3Q96KX2 299 aa18.52■□□□□ 0.56
PTCHD3-202ENST00000622555 SNRNP25Q9BV90 132 aaKnown RBP18.52■□□□□ 0.56
PTCHD3-202ENST00000622555 ATXN3LQ9H3M9 355 aa18.52■□□□□ 0.56
PTCHD3-202ENST00000622555 WDCPQ9H6R7 721 aa18.52■□□□□ 0.56
PTCHD3-202ENST00000622555 PIDD1Q9HB75 910 aa18.52■□□□□ 0.56
PTCHD3-202ENST00000622555 GPATCH2LQ9NWQ4 482 aa18.52■□□□□ 0.56
PTCHD3-202ENST00000622555 DNMT3LQ9UJW3 386 aa18.52■□□□□ 0.56
PTCHD3-202ENST00000622555 C2orf16Q68DN1 1984 aa18.52■□□□□ 0.56
PTCHD3-202ENST00000622555 CDH23Q9H251 3354 aa18.52■□□□□ 0.55
PTCHD3-202ENST00000622555 A0A1W2PRU2 124 aa18.52■□□□□ 0.55
PTCHD3-202ENST00000622555 LRRD1A4D1F6 860 aa18.52■□□□□ 0.55
PTCHD3-202ENST00000622555 COCHO43405 550 aa18.52■□□□□ 0.55
PTCHD3-202ENST00000622555 CEP104O60308 925 aa18.52■□□□□ 0.55
PTCHD3-202ENST00000622555 ZRANB2O95218 330 aaKnown RBP eCLIP18.52■□□□□ 0.55
PTCHD3-202ENST00000622555 OAS1P00973 400 aaKnown RBP18.52■□□□□ 0.55
PTCHD3-202ENST00000622555 RHOP08100 348 aa18.52■□□□□ 0.55
PTCHD3-202ENST00000622555 SRGAP2BP0DMP2 458 aa18.52■□□□□ 0.55
PTCHD3-202ENST00000622555 PYGMP11217 842 aa18.52■□□□□ 0.55
PTCHD3-202ENST00000622555 EPHA5P54756 1037 aa18.52■□□□□ 0.55
PTCHD3-202ENST00000622555 KLHDC10Q6PID8 442 aa18.52■□□□□ 0.55
PTCHD3-202ENST00000622555 TMC5Q6UXY8 1006 aa18.52■□□□□ 0.55
PTCHD3-202ENST00000622555 PDZD4Q76G19 769 aaPredicted RBP18.52■□□□□ 0.55
PTCHD3-202ENST00000622555 CCDC50Q8IVM0 306 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms