RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 MRGBPQ9NV56 204 aa14.32□□□□□ -0.12
CNOT3-210ENST00000618939 AAR2Q9Y312 384 aaKnown RBP14.32□□□□□ -0.12
CNOT3-210ENST00000618939 MYH3P11055 1940 aa14.32□□□□□ -0.12
CNOT3-210ENST00000618939 PFDN1O60925 122 aa14.31□□□□□ -0.12
CNOT3-210ENST00000618939 SERPINE1P05121 402 aa14.31□□□□□ -0.12
CNOT3-210ENST00000618939 UNGP13051 313 aaPredicted RBP14.31□□□□□ -0.12
CNOT3-210ENST00000618939 ADORA2AP29274 412 aa14.31□□□□□ -0.12
CNOT3-210ENST00000618939 GTF2A2P52657 109 aa14.31□□□□□ -0.12
CNOT3-210ENST00000618939 XRCC4Q13426 336 aa14.31□□□□□ -0.12
CNOT3-210ENST00000618939 TSTA3Q13630 321 aaPredicted RBP14.31□□□□□ -0.12
CNOT3-210ENST00000618939 PDCD2Q16342 344 aaPredicted RBP14.31□□□□□ -0.12
CNOT3-210ENST00000618939 ZCCHC23Q6ZST2 131 aa14.31□□□□□ -0.12
CNOT3-210ENST00000618939 MTMR14Q8NCE2 650 aa14.31□□□□□ -0.12
CNOT3-210ENST00000618939 NKD2Q969F2 451 aaPredicted RBP14.31□□□□□ -0.12
CNOT3-210ENST00000618939 KLRG1Q96E93 195 aa14.31□□□□□ -0.12
CNOT3-210ENST00000618939 ABT1Q9ULW3 272 aaKnown RBP14.31□□□□□ -0.12
CNOT3-210ENST00000618939 ANGPT2O15123 496 aa14.31□□□□□ -0.12
CNOT3-210ENST00000618939 NCAM2O15394 837 aa14.31□□□□□ -0.12
CNOT3-210ENST00000618939 ODC1P11926 461 aa14.31□□□□□ -0.12
CNOT3-210ENST00000618939 CCDC130P13994 396 aa14.31□□□□□ -0.12
CNOT3-210ENST00000618939 ARL2P36404 184 aa14.31□□□□□ -0.12
CNOT3-210ENST00000618939 ADCYAP1R1P41586 468 aa14.31□□□□□ -0.12
CNOT3-210ENST00000618939 GEMP55040 296 aa14.31□□□□□ -0.12
CNOT3-210ENST00000618939 LACTB2Q53H82 288 aaPredicted RBP14.31□□□□□ -0.12
CNOT3-210ENST00000618939 GIPC2Q8TF65 315 aa14.31□□□□□ -0.12
CNOT3-210ENST00000618939 ORC6Q9Y5N6 252 aa14.31□□□□□ -0.12
CNOT3-210ENST00000618939 TIAM2Q8IVF5 1701 aa14.31□□□□□ -0.12
CNOT3-210ENST00000618939 EDF1O60869 148 aaKnown RBP14.31□□□□□ -0.12
CNOT3-210ENST00000618939 AVPR1AP37288 418 aa14.31□□□□□ -0.12
CNOT3-210ENST00000618939 FLOT2Q14254 428 aa14.31□□□□□ -0.12
CNOT3-210ENST00000618939 FAM83EQ2M2I3 478 aa14.31□□□□□ -0.12
CNOT3-210ENST00000618939 HSDL1Q3SXM5 330 aa14.31□□□□□ -0.12
CNOT3-210ENST00000618939 LCA5Q86VQ0 697 aa14.31□□□□□ -0.12
CNOT3-210ENST00000618939 EME1Q96AY2 570 aa14.31□□□□□ -0.12
CNOT3-210ENST00000618939 TBC1D10AQ9BXI6 508 aa14.31□□□□□ -0.12
CNOT3-210ENST00000618939 LHX5Q9H2C1 402 aa14.31□□□□□ -0.12
CNOT3-210ENST00000618939 APOBEC3GQ9HC16 384 aaKnown RBP14.31□□□□□ -0.12
CNOT3-210ENST00000618939 GPRC5DQ9NZD1 345 aa14.31□□□□□ -0.12
CNOT3-210ENST00000618939 UBP1Q9NZI7 540 aa14.31□□□□□ -0.12
CNOT3-210ENST00000618939 EFR3BQ9Y2G0 817 aa14.31□□□□□ -0.12
CNOT3-210ENST00000618939 DOT1LQ8TEK3 1739 aa14.31□□□□□ -0.12
CNOT3-210ENST00000618939 FOXO6A8MYZ6 492 aa14.31□□□□□ -0.12
CNOT3-210ENST00000618939 E9PBE3 544 aa14.31□□□□□ -0.12
CNOT3-210ENST00000618939 KLHL41O60662 606 aa14.31□□□□□ -0.12
CNOT3-210ENST00000618939 RECQL4O94761 1208 aa14.31□□□□□ -0.12
CNOT3-210ENST00000618939 PGAM1P18669 254 aa14.31□□□□□ -0.12
CNOT3-210ENST00000618939 XPAP23025 273 aaPredicted RBP14.31□□□□□ -0.12
CNOT3-210ENST00000618939 DSG1Q02413 1049 aa14.31□□□□□ -0.12
CNOT3-210ENST00000618939 PDAP1Q13442 181 aaKnown RBP14.31□□□□□ -0.12
CNOT3-210ENST00000618939 MAPRE1Q15691 268 aaKnown RBP14.31□□□□□ -0.12
CNOT3-210ENST00000618939 ZNF398Q8TD17 642 aa14.31□□□□□ -0.12
CNOT3-210ENST00000618939 PIK3R5Q8WYR1 880 aa14.31□□□□□ -0.12
CNOT3-210ENST00000618939 CPXM1Q96SM3 734 aa14.31□□□□□ -0.12
CNOT3-210ENST00000618939 HAUS8Q9BT25 410 aa14.31□□□□□ -0.12
CNOT3-210ENST00000618939 RNPEPL1Q9HAU8 725 aa14.31□□□□□ -0.12
CNOT3-210ENST00000618939 HACD1B0YJ81 288 aa14.3□□□□□ -0.12
CNOT3-210ENST00000618939 F8W8V4 182 aa14.3□□□□□ -0.12
CNOT3-210ENST00000618939 B4GALT4O60513 344 aa14.3□□□□□ -0.12
CNOT3-210ENST00000618939 THRAP10827 490 aa14.3□□□□□ -0.12
CNOT3-210ENST00000618939 SERPINB5P36952 375 aa14.3□□□□□ -0.12
CNOT3-210ENST00000618939 SLC1A6P48664 564 aa14.3□□□□□ -0.12
CNOT3-210ENST00000618939 SNX30Q5VWJ9 437 aa14.3□□□□□ -0.12
CNOT3-210ENST00000618939 CES3Q6UWW8 571 aa14.3□□□□□ -0.12
CNOT3-210ENST00000618939 DNAJB3Q8WWF6 145 aa14.3□□□□□ -0.12
CNOT3-210ENST00000618939 PBXIP1Q96AQ6 731 aa14.3□□□□□ -0.12
CNOT3-210ENST00000618939 YY1AP1Q9H869 796 aa14.3□□□□□ -0.12
CNOT3-210ENST00000618939 DDX43Q9NXZ2 648 aaKnown RBP14.3□□□□□ -0.12
CNOT3-210ENST00000618939 MYH13Q9UKX3 1938 aa14.3□□□□□ -0.12
CNOT3-210ENST00000618939 DNM1LO00429 736 aa14.3□□□□□ -0.12
CNOT3-210ENST00000618939 LRCH4O75427 683 aa14.3□□□□□ -0.12
CNOT3-210ENST00000618939 CDKN2BP42772 138 aa14.3□□□□□ -0.12
CNOT3-210ENST00000618939 PAN2Q504Q3 1202 aaKnown RBP14.3□□□□□ -0.12
CNOT3-210ENST00000618939 SEL1L3Q68CR1 1132 aa14.3□□□□□ -0.12
CNOT3-210ENST00000618939 SLC30A9Q6PML9 568 aa14.3□□□□□ -0.12
CNOT3-210ENST00000618939 GLB1LQ6UWU2 654 aa14.3□□□□□ -0.12
CNOT3-210ENST00000618939 UNC93AQ86WB7 457 aa14.3□□□□□ -0.12
CNOT3-210ENST00000618939 SYT15Q9BQS2 421 aa14.3□□□□□ -0.12
CNOT3-210ENST00000618939 NIFKQ9BYG3 293 aaKnown RBP14.3□□□□□ -0.12
CNOT3-210ENST00000618939 AURKCQ9UQB9 309 aa14.3□□□□□ -0.12
CNOT3-210ENST00000618939 RUVBL2Q9Y230 463 aaKnown RBP14.3□□□□□ -0.12
CNOT3-210ENST00000618939 PHLPP1O60346 1717 aa14.3□□□□□ -0.12
CNOT3-210ENST00000618939 TCRBV9S1A1TA0A576 114 aa14.3□□□□□ -0.12
CNOT3-210ENST00000618939 STRNO43815 780 aa14.3□□□□□ -0.12
CNOT3-210ENST00000618939 H2AFYO75367 372 aaKnown RBP14.3□□□□□ -0.12
CNOT3-210ENST00000618939 THP07101 528 aa14.3□□□□□ -0.12
CNOT3-210ENST00000618939 STMN1P16949 149 aa14.3□□□□□ -0.12
CNOT3-210ENST00000618939 LHX1P48742 406 aa14.3□□□□□ -0.12
CNOT3-210ENST00000618939 ZC3H12AQ5D1E8 599 aaKnown RBP14.3□□□□□ -0.12
CNOT3-210ENST00000618939 NRDE2Q9H7Z3 1164 aa14.3□□□□□ -0.12
CNOT3-210ENST00000618939 RNF19AQ9NV58 838 aa14.3□□□□□ -0.12
CNOT3-210ENST00000618939 C2CD2Q9Y426 696 aa14.3□□□□□ -0.12
CNOT3-210ENST00000618939 ARHGAP10A1A4S6 786 aa14.29□□□□□ -0.12
CNOT3-210ENST00000618939 MAGEA13PA6NCF6 341 aa14.29□□□□□ -0.12
CNOT3-210ENST00000618939 TRPC5OSA6NMA1 111 aa14.29□□□□□ -0.12
CNOT3-210ENST00000618939 IL10P22301 178 aa14.29□□□□□ -0.12
CNOT3-210ENST00000618939 ENPEPQ07075 957 aa14.29□□□□□ -0.12
CNOT3-210ENST00000618939 CYTH1Q15438 398 aa14.29□□□□□ -0.12
CNOT3-210ENST00000618939 PDPK2PQ6A1A2 396 aa14.29□□□□□ -0.12
CNOT3-210ENST00000618939 DCP1BQ8IZD4 617 aaKnown RBP14.29□□□□□ -0.12
CNOT3-210ENST00000618939 ABHD16BQ9H3Z7 469 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms