RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 FARP1Q9Y4F1 1045 aaPredicted RBP26.34■■□□□ 1.81
VEGFC-202ENST00000618562 RASA4BC9J798 803 aa26.33■■□□□ 1.81
VEGFC-202ENST00000618562 RASA4O43374 803 aa26.33■■□□□ 1.81
VEGFC-202ENST00000618562 PQBP1O60828 265 aaKnown RBP26.33■■□□□ 1.81
VEGFC-202ENST00000618562 AP1G2O75843 785 aa26.33■■□□□ 1.81
VEGFC-202ENST00000618562 RABGGTBP53611 331 aa26.33■■□□□ 1.81
VEGFC-202ENST00000618562 RASA2Q15283 850 aa26.33■■□□□ 1.81
VEGFC-202ENST00000618562 TMED2Q15363 201 aa26.33■■□□□ 1.81
VEGFC-202ENST00000618562 TRPM8Q7Z2W7 1104 aa26.33■■□□□ 1.81
VEGFC-202ENST00000618562 ZMIZ2Q8NF64 920 aa26.33■■□□□ 1.81
VEGFC-202ENST00000618562 MAGEB18Q96M61 343 aa26.33■■□□□ 1.81
VEGFC-202ENST00000618562 SLC40A1Q9NP59 571 aa26.33■■□□□ 1.81
VEGFC-202ENST00000618562 STAU2Q9NUL3 570 aaKnown RBP eCLIP26.33■■□□□ 1.81
VEGFC-202ENST00000618562 TBC1D13Q9NVG8 400 aa26.33■■□□□ 1.81
VEGFC-202ENST00000618562 FGFR1OP2Q9NVK5 253 aa26.33■■□□□ 1.81
VEGFC-202ENST00000618562 TMEM161AQ9NX61 479 aa26.33■■□□□ 1.81
VEGFC-202ENST00000618562 DYNC1LI1Q9Y6G9 523 aaKnown RBP26.33■■□□□ 1.81
VEGFC-202ENST00000618562 SCN5AQ14524 2016 aa26.33■■□□□ 1.81
VEGFC-202ENST00000618562 CST8O60676 142 aa26.32■■□□□ 1.8
VEGFC-202ENST00000618562 ENDOD1O94919 500 aa26.32■■□□□ 1.8
VEGFC-202ENST00000618562 IFNB1P01574 187 aa26.32■■□□□ 1.8
VEGFC-202ENST00000618562 GCAP28676 217 aa26.32■■□□□ 1.8
VEGFC-202ENST00000618562 STX2P32856 288 aa26.32■■□□□ 1.8
VEGFC-202ENST00000618562 NDUFV1P49821 464 aa26.32■■□□□ 1.8
VEGFC-202ENST00000618562 COLGALT2Q8IYK4 626 aa26.32■■□□□ 1.8
VEGFC-202ENST00000618562 URGCPQ8TCY9 931 aa26.32■■□□□ 1.8
VEGFC-202ENST00000618562 CENPIQ92674 756 aaPredicted RBP26.32■■□□□ 1.8
VEGFC-202ENST00000618562 KCNK16Q96T55 309 aa26.32■■□□□ 1.8
VEGFC-202ENST00000618562 SENP1Q9P0U3 644 aa26.32■■□□□ 1.8
VEGFC-202ENST00000618562 FOXO6A8MYZ6 492 aa26.32■■□□□ 1.8
VEGFC-202ENST00000618562 ENPP3O14638 875 aa26.32■■□□□ 1.8
VEGFC-202ENST00000618562 MRPS5P82675 430 aaKnown RBP26.32■■□□□ 1.8
VEGFC-202ENST00000618562 XRCC4Q13426 336 aa26.32■■□□□ 1.8
VEGFC-202ENST00000618562 INTS6LQ5JSJ4 861 aaKnown RBP26.32■■□□□ 1.8
VEGFC-202ENST00000618562 EFHC1Q5JVL4 640 aa26.32■■□□□ 1.8
VEGFC-202ENST00000618562 NUGGCQ68CJ6 796 aa26.32■■□□□ 1.8
VEGFC-202ENST00000618562 SCYL2Q6P3W7 929 aa26.32■■□□□ 1.8
VEGFC-202ENST00000618562 FAM171BQ6P995 826 aa26.32■■□□□ 1.8
VEGFC-202ENST00000618562 TRABD2AQ86V40 505 aa26.32■■□□□ 1.8
VEGFC-202ENST00000618562 OR10T2Q8NGX3 314 aa26.32■■□□□ 1.8
VEGFC-202ENST00000618562 MYLPFQ96A32 169 aa26.32■■□□□ 1.8
VEGFC-202ENST00000618562 PKMYT1Q99640 499 aa26.32■■□□□ 1.8
VEGFC-202ENST00000618562 PLCD4Q9BRC7 762 aa26.32■■□□□ 1.8
VEGFC-202ENST00000618562 LRRC4Q9HBW1 653 aa26.32■■□□□ 1.8
VEGFC-202ENST00000618562 SLC12A4Q9UP95 1085 aa26.32■■□□□ 1.8
VEGFC-202ENST00000618562 FAM47DPA6NHR8 397 aa26.31■■□□□ 1.8
VEGFC-202ENST00000618562 SUN1O94901 812 aa26.31■■□□□ 1.8
VEGFC-202ENST00000618562 SLC18A1P54219 525 aa26.31■■□□□ 1.8
VEGFC-202ENST00000618562 DYNLT1P63172 113 aa26.31■■□□□ 1.8
VEGFC-202ENST00000618562 FASTKD3Q14CZ7 662 aaKnown RBP26.31■■□□□ 1.8
VEGFC-202ENST00000618562 TCTN1Q2MV58 587 aa26.31■■□□□ 1.8
VEGFC-202ENST00000618562 OVOS1Q6IE37 1185 aa26.31■■□□□ 1.8
VEGFC-202ENST00000618562 PPIL6Q8IXY8 311 aa26.31■■□□□ 1.8
VEGFC-202ENST00000618562 ZBED8Q8IZ13 594 aa26.31■■□□□ 1.8
VEGFC-202ENST00000618562 CALN1Q9BXU9 219 aa26.31■■□□□ 1.8
VEGFC-202ENST00000618562 RHOBTB2Q9BYZ6 727 aa26.31■■□□□ 1.8
VEGFC-202ENST00000618562 TANC1Q9C0D5 1861 aa26.31■■□□□ 1.8
VEGFC-202ENST00000618562 SMAPO00193 183 aa26.3■■□□□ 1.8
VEGFC-202ENST00000618562 CDH6P55285 790 aa26.3■■□□□ 1.8
VEGFC-202ENST00000618562 HIF1AQ16665 826 aa26.3■■□□□ 1.8
VEGFC-202ENST00000618562 TGS1Q96RS0 853 aaKnown RBP26.3■■□□□ 1.8
VEGFC-202ENST00000618562 TMEM209Q96SK2 561 aa26.3■■□□□ 1.8
VEGFC-202ENST00000618562 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP26.3■■□□□ 1.8
VEGFC-202ENST00000618562 SLC24A2Q9UI40 661 aa26.3■■□□□ 1.8
VEGFC-202ENST00000618562 COL6A1P12109 1028 aa26.3■■□□□ 1.8
VEGFC-202ENST00000618562 DESP17661 470 aa26.3■■□□□ 1.8
VEGFC-202ENST00000618562 TKTL1P51854 596 aa26.3■■□□□ 1.8
VEGFC-202ENST00000618562 ATN1P54259 1190 aaPredicted RBP26.3■■□□□ 1.8
VEGFC-202ENST00000618562 MMRN1Q13201 1228 aa26.3■■□□□ 1.8
VEGFC-202ENST00000618562 BOLA3Q53S33 107 aa26.3■■□□□ 1.8
VEGFC-202ENST00000618562 GPRIN1Q7Z2K8 1008 aa26.3■■□□□ 1.8
VEGFC-202ENST00000618562 SIX6OS1Q8N1H7 587 aa26.3■■□□□ 1.8
VEGFC-202ENST00000618562 GDAP1Q8TB36 358 aa26.3■■□□□ 1.8
VEGFC-202ENST00000618562 TEKT4Q8WW24 435 aa26.3■■□□□ 1.8
VEGFC-202ENST00000618562 SMARCD1Q96GM5 515 aa26.3■■□□□ 1.8
VEGFC-202ENST00000618562 ELAC1Q9H777 363 aaKnown RBP26.3■■□□□ 1.8
VEGFC-202ENST00000618562 VPS37BQ9H9H4 285 aa26.3■■□□□ 1.8
VEGFC-202ENST00000618562 KLC4Q9NSK0 619 aa26.3■■□□□ 1.8
VEGFC-202ENST00000618562 TMLHEQ9NVH6 421 aa26.3■■□□□ 1.8
VEGFC-202ENST00000618562 GPATCH2LQ9NWQ4 482 aa26.3■■□□□ 1.8
VEGFC-202ENST00000618562 KANSL3Q9P2N6 904 aa26.3■■□□□ 1.8
VEGFC-202ENST00000618562 SAE1Q9UBE0 346 aaPredicted RBP26.3■■□□□ 1.8
VEGFC-202ENST00000618562 DNAJB4Q9UDY4 337 aa26.3■■□□□ 1.8
VEGFC-202ENST00000618562 FETUBQ9UGM5 382 aa26.3■■□□□ 1.8
VEGFC-202ENST00000618562 PTPRDP23468 1912 aa26.29■■□□□ 1.8
VEGFC-202ENST00000618562 NLRC5Q86WI3 1866 aa26.29■■□□□ 1.8
VEGFC-202ENST00000618562 APOC4-APOC2K7ER74 178 aa26.29■■□□□ 1.8
VEGFC-202ENST00000618562 PRPF4O43172 522 aaKnown RBP eCLIP26.29■■□□□ 1.8
VEGFC-202ENST00000618562 APOC2P02655 101 aa26.29■■□□□ 1.8
VEGFC-202ENST00000618562 TYMPP19971 482 aa26.29■■□□□ 1.8
VEGFC-202ENST00000618562 MATKP42679 507 aa26.29■■□□□ 1.8
VEGFC-202ENST00000618562 CTCFP49711 727 aaPredicted RBP26.29■■□□□ 1.8
VEGFC-202ENST00000618562 ATXN1P54253 815 aaKnown RBP26.29■■□□□ 1.8
VEGFC-202ENST00000618562 RNASELQ05823 741 aaKnown RBP26.29■■□□□ 1.8
VEGFC-202ENST00000618562 PDIA2Q13087 525 aaKnown RBP26.29■■□□□ 1.8
VEGFC-202ENST00000618562 DPYSL3Q14195 570 aa26.29■■□□□ 1.8
VEGFC-202ENST00000618562 LRRTM3Q86VH5 581 aa26.29■■□□□ 1.8
VEGFC-202ENST00000618562 FAM149B1Q96BN6 582 aa26.29■■□□□ 1.8
VEGFC-202ENST00000618562 TBCBQ99426 244 aa26.29■■□□□ 1.8
VEGFC-202ENST00000618562 NCAPGQ9BPX3 1015 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms