RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 USP18Q9UMW8 372 aa16.96■□□□□ 0.3
SNAP47-213ENST00000617596 FAM92AA1XBS5 289 aa16.95■□□□□ 0.3
SNAP47-213ENST00000617596 PI4K2BG5E9Z4 385 aa16.95■□□□□ 0.3
SNAP47-213ENST00000617596 MDM4O15151 490 aa16.95■□□□□ 0.3
SNAP47-213ENST00000617596 CLASP2O75122 1294 aaKnown RBP16.95■□□□□ 0.3
SNAP47-213ENST00000617596 PYGMP11217 842 aa16.95■□□□□ 0.3
SNAP47-213ENST00000617596 CTNNA2P26232 953 aa16.95■□□□□ 0.3
SNAP47-213ENST00000617596 CASP8Q14790 479 aa16.95■□□□□ 0.3
SNAP47-213ENST00000617596 TAF12Q16514 161 aa16.95■□□□□ 0.3
SNAP47-213ENST00000617596 DNAJB7Q7Z6W7 309 aaPredicted RBP16.95■□□□□ 0.3
SNAP47-213ENST00000617596 MON1AQ86VX9 555 aa16.95■□□□□ 0.3
SNAP47-213ENST00000617596 FAM131BQ86XD5 332 aa16.95■□□□□ 0.3
SNAP47-213ENST00000617596 UBL4BQ8N7F7 174 aa16.95■□□□□ 0.3
SNAP47-213ENST00000617596 NT5C3BQ969T7 300 aa16.95■□□□□ 0.3
SNAP47-213ENST00000617596 EPC1Q9H2F5 836 aa16.95■□□□□ 0.3
SNAP47-213ENST00000617596 PIGVQ9NUD9 493 aa16.95■□□□□ 0.3
SNAP47-213ENST00000617596 ATXN2Q99700 1313 aaKnown RBP16.95■□□□□ 0.3
SNAP47-213ENST00000617596 MIF4GDA9UHW6 222 aaKnown RBP16.94■□□□□ 0.3
SNAP47-213ENST00000617596 CCL16O15467 120 aa16.94■□□□□ 0.3
SNAP47-213ENST00000617596 KIF1CO43896 1103 aaKnown RBP16.94■□□□□ 0.3
SNAP47-213ENST00000617596 CEP104O60308 925 aa16.94■□□□□ 0.3
SNAP47-213ENST00000617596 EPHB3P54753 998 aa16.94■□□□□ 0.3
SNAP47-213ENST00000617596 CYP4V2Q6ZWL3 525 aaPredicted RBP16.94■□□□□ 0.3
SNAP47-213ENST00000617596 TAC4Q86UU9 113 aa16.94■□□□□ 0.3
SNAP47-213ENST00000617596 CREG2Q8IUH2 290 aa16.94■□□□□ 0.3
SNAP47-213ENST00000617596 DQX1Q8TE96 717 aaKnown RBP16.94■□□□□ 0.3
SNAP47-213ENST00000617596 CENPIQ92674 756 aaPredicted RBP16.94■□□□□ 0.3
SNAP47-213ENST00000617596 MAN1C1Q9NR34 630 aa16.94■□□□□ 0.3
SNAP47-213ENST00000617596 ABCC13Q9NSE7 274 aa16.94■□□□□ 0.3
SNAP47-213ENST00000617596 GPATCH2LQ9NWQ4 482 aa16.94■□□□□ 0.3
SNAP47-213ENST00000617596 STAP1Q9ULZ2 295 aa16.94■□□□□ 0.3
SNAP47-213ENST00000617596 XIRP2A4UGR9 3374 aa16.94■□□□□ 0.3
SNAP47-213ENST00000617596 PLXNA3P51805 1871 aa16.94■□□□□ 0.3
SNAP47-213ENST00000617596 PDE2AO00408 941 aaPredicted RBP16.94■□□□□ 0.3
SNAP47-213ENST00000617596 MSI1O43347 362 aaKnown RBP16.94■□□□□ 0.3
SNAP47-213ENST00000617596 SHOX2O60902 331 aaPredicted RBP16.94■□□□□ 0.3
SNAP47-213ENST00000617596 TRUB2O95900 331 aaKnown RBP16.94■□□□□ 0.3
SNAP47-213ENST00000617596 LRG1P02750 347 aa16.94■□□□□ 0.3
SNAP47-213ENST00000617596 CSH1P0DML2 217 aa16.94■□□□□ 0.3
SNAP47-213ENST00000617596 CSH2P0DML3 217 aa16.94■□□□□ 0.3
SNAP47-213ENST00000617596 TCP1P17987 556 aaKnown RBP16.94■□□□□ 0.3
SNAP47-213ENST00000617596 RWDD2BP57060 319 aa16.94■□□□□ 0.3
SNAP47-213ENST00000617596 VEPH1Q14D04 833 aa16.94■□□□□ 0.3
SNAP47-213ENST00000617596 ZNF697Q5TEC3 545 aa16.94■□□□□ 0.3
SNAP47-213ENST00000617596 ANKS1BQ7Z6G8 1248 aa16.94■□□□□ 0.3
SNAP47-213ENST00000617596 CCDC185Q8N715 623 aa16.94■□□□□ 0.3
SNAP47-213ENST00000617596 HSPH1Q92598 858 aa16.94■□□□□ 0.3
SNAP47-213ENST00000617596 CASP10Q92851 521 aa16.94■□□□□ 0.3
SNAP47-213ENST00000617596 RNF25Q96BH1 459 aaPredicted RBP16.94■□□□□ 0.3
SNAP47-213ENST00000617596 ZNF512Q96ME7 567 aaPredicted RBP16.94■□□□□ 0.3
SNAP47-213ENST00000617596 SLITRK1Q96PX8 696 aa16.94■□□□□ 0.3
SNAP47-213ENST00000617596 TTLL2Q9BWV7 592 aa16.94■□□□□ 0.3
SNAP47-213ENST00000617596 CCSER2Q9H7U1 834 aa16.94■□□□□ 0.3
SNAP47-213ENST00000617596 FAM204AQ9H8W3 233 aa16.94■□□□□ 0.3
SNAP47-213ENST00000617596 ZNF334Q9HCZ1 680 aaPredicted RBP16.94■□□□□ 0.3
SNAP47-213ENST00000617596 DDIT4Q9NX09 232 aa16.94■□□□□ 0.3
SNAP47-213ENST00000617596 EYSQ5T1H1 3165 aa16.93■□□□□ 0.3
SNAP47-213ENST00000617596 MYO16Q9Y6X6 1858 aa16.93■□□□□ 0.3
SNAP47-213ENST00000617596 PSTPIP1O43586 416 aa16.93■□□□□ 0.3
SNAP47-213ENST00000617596 PRPSAP2O60256 369 aa16.93■□□□□ 0.3
SNAP47-213ENST00000617596 RARAP10276 462 aa16.93■□□□□ 0.3
SNAP47-213ENST00000617596 RARGP13631 454 aa16.93■□□□□ 0.3
SNAP47-213ENST00000617596 DEUP1Q05D60 604 aa16.93■□□□□ 0.3
SNAP47-213ENST00000617596 ACAP1Q15027 740 aa16.93■□□□□ 0.3
SNAP47-213ENST00000617596 HS6ST3Q8IZP7 471 aa16.93■□□□□ 0.3
SNAP47-213ENST00000617596 RAPGEF5Q92565 580 aa16.93■□□□□ 0.3
SNAP47-213ENST00000617596 PSMG2Q969U7 264 aa16.93■□□□□ 0.3
SNAP47-213ENST00000617596 HCFC2Q9Y5Z7 792 aa16.93■□□□□ 0.3
SNAP47-213ENST00000617596 MYO9BQ13459 2157 aa16.93■□□□□ 0.3
SNAP47-213ENST00000617596 CD48P09326 243 aa16.92■□□□□ 0.3
SNAP47-213ENST00000617596 PRLRP16471 622 aa16.92■□□□□ 0.3
SNAP47-213ENST00000617596 PCK1P35558 622 aa16.92■□□□□ 0.3
SNAP47-213ENST00000617596 NRIP1P48552 1158 aa16.92■□□□□ 0.3
SNAP47-213ENST00000617596 CA9Q16790 459 aa16.92■□□□□ 0.3
SNAP47-213ENST00000617596 HADHQ16836 314 aaKnown RBP16.92■□□□□ 0.3
SNAP47-213ENST00000617596 MAP9Q49MG5 647 aa16.92■□□□□ 0.3
SNAP47-213ENST00000617596 ZC3H12AQ5D1E8 599 aaKnown RBP16.92■□□□□ 0.3
SNAP47-213ENST00000617596 CCDC149Q6ZUS6 474 aa16.92■□□□□ 0.3
SNAP47-213ENST00000617596 BNIPLQ7Z465 357 aa16.92■□□□□ 0.3
SNAP47-213ENST00000617596 ADAT2Q7Z6V5 191 aaKnown RBP16.92■□□□□ 0.3
SNAP47-213ENST00000617596 RNF139Q8WU17 664 aa16.92■□□□□ 0.3
SNAP47-213ENST00000617596 ANLNQ9NQW6 1124 aa16.92■□□□□ 0.3
SNAP47-213ENST00000617596 TLR8Q9NR97 1041 aaKnown RBP16.92■□□□□ 0.3
SNAP47-213ENST00000617596 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.92■□□□□ 0.3
SNAP47-213ENST00000617596 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.92■□□□□ 0.34e-7■■■■■ 39.9
SNAP47-213ENST00000617596 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.92■□□□□ 0.3
SNAP47-213ENST00000617596 A6NNZ2 444 aa16.92■□□□□ 0.3
SNAP47-213ENST00000617596 NRG2O14511 850 aaPredicted RBP16.92■□□□□ 0.3
SNAP47-213ENST00000617596 KRT1P04264 644 aa16.92■□□□□ 0.3
SNAP47-213ENST00000617596 RDXP35241 583 aaKnown RBP16.92■□□□□ 0.3
SNAP47-213ENST00000617596 SMAD3P84022 425 aaKnown RBP16.92■□□□□ 0.3
SNAP47-213ENST00000617596 EFEMP1Q12805 493 aa16.92■□□□□ 0.3
SNAP47-213ENST00000617596 TUBB8Q3ZCM7 444 aa16.92■□□□□ 0.3
SNAP47-213ENST00000617596 STRADAQ7RTN6 431 aa16.92■□□□□ 0.3
SNAP47-213ENST00000617596 CCDC50Q8IVM0 306 aa16.92■□□□□ 0.3
SNAP47-213ENST00000617596 MYRFLQ96LU7 910 aa16.92■□□□□ 0.3
SNAP47-213ENST00000617596 TLE6Q9H808 572 aa16.92■□□□□ 0.3
SNAP47-213ENST00000617596 WDR6Q9NNW5 1121 aaKnown RBP16.92■□□□□ 0.3
SNAP47-213ENST00000617596 HCFC1R1Q9NWW0 138 aa16.92■□□□□ 0.3
SNAP47-213ENST00000617596 MAFFQ9ULX9 164 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms