RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 SLC38A7Q9NVC3 462 aa9.14□□□□□ -0.95
VPS11-206ENST00000614944 NDUFA13Q9P0J0 144 aa9.14□□□□□ -0.95
VPS11-206ENST00000614944 CRNNQ9UBG3 495 aaPredicted RBP9.14□□□□□ -0.95
VPS11-206ENST00000614944 HBS1LQ9Y450 684 aaKnown RBP9.14□□□□□ -0.95
VPS11-206ENST00000614944 NCANO14594 1321 aa9.14□□□□□ -0.95
VPS11-206ENST00000614944 ANKRD34BA5PLL1 514 aa9.14□□□□□ -0.95
VPS11-206ENST00000614944 SGPL1O95470 568 aa9.14□□□□□ -0.95
VPS11-206ENST00000614944 PAHP00439 452 aa9.14□□□□□ -0.95
VPS11-206ENST00000614944 CXCL10P02778 98 aa9.14□□□□□ -0.95
VPS11-206ENST00000614944 PAEPP09466 180 aa9.14□□□□□ -0.95
VPS11-206ENST00000614944 CXCL8P10145 99 aa9.14□□□□□ -0.95
VPS11-206ENST00000614944 CKBP12277 381 aa9.14□□□□□ -0.95
VPS11-206ENST00000614944 MSH2P43246 934 aa9.14□□□□□ -0.95
VPS11-206ENST00000614944 CCR3P51677 355 aa9.14□□□□□ -0.95
VPS11-206ENST00000614944 HTRA3P83110 453 aa9.14□□□□□ -0.95
VPS11-206ENST00000614944 GOLGA8FQ08AF8 430 aa9.14□□□□□ -0.95
VPS11-206ENST00000614944 GOLGA8DPQ0D2H9 430 aa9.14□□□□□ -0.95
VPS11-206ENST00000614944 LPIN1Q14693 890 aa9.14□□□□□ -0.95
VPS11-206ENST00000614944 SPA17Q15506 151 aa9.14□□□□□ -0.95
VPS11-206ENST00000614944 PTPN21Q16825 1174 aa9.14□□□□□ -0.95
VPS11-206ENST00000614944 LIN52Q52LA3 116 aa9.14□□□□□ -0.95
VPS11-206ENST00000614944 TJAP1Q5JTD0 557 aa9.14□□□□□ -0.95
VPS11-206ENST00000614944 JADE1Q6IE81 842 aa9.14□□□□□ -0.95
VPS11-206ENST00000614944 ARL6IP6Q8N6S5 226 aa9.14□□□□□ -0.95
VPS11-206ENST00000614944 CCDC197Q8NCU1 140 aa9.14□□□□□ -0.95
VPS11-206ENST00000614944 BEST2Q8NFU1 509 aa9.14□□□□□ -0.95
VPS11-206ENST00000614944 PGBD4Q96DM1 585 aa9.14□□□□□ -0.95
VPS11-206ENST00000614944 POP1Q99575 1024 aaKnown RBP9.14□□□□□ -0.95
VPS11-206ENST00000614944 NLRC4Q9NPP4 1024 aa9.14□□□□□ -0.95
VPS11-206ENST00000614944 GDAP2Q9NXN4 497 aa9.14□□□□□ -0.95
VPS11-206ENST00000614944 KCTD5Q9NXV2 234 aa9.14□□□□□ -0.95
VPS11-206ENST00000614944 SIX4Q9UIU6 781 aa9.14□□□□□ -0.95
VPS11-206ENST00000614944 ST3GAL5Q9UNP4 418 aa9.14□□□□□ -0.95
VPS11-206ENST00000614944 ARHGAP33O14559 1287 aa9.13□□□□□ -0.95
VPS11-206ENST00000614944 ZMYND10O75800 440 aa9.13□□□□□ -0.95
VPS11-206ENST00000614944 TJP3O95049 919 aa9.13□□□□□ -0.95
VPS11-206ENST00000614944 TFRCP02786 760 aaKnown RBP9.13□□□□□ -0.95
VPS11-206ENST00000614944 VAV1P15498 845 aa9.13□□□□□ -0.95
VPS11-206ENST00000614944 CALB2P22676 271 aa9.13□□□□□ -0.95
VPS11-206ENST00000614944 NOP14P78316 857 aaKnown RBP9.13□□□□□ -0.95
VPS11-206ENST00000614944 DHX9Q08211 1270 aaKnown RBP9.13□□□□□ -0.95
VPS11-206ENST00000614944 NIPAL4Q0D2K0 466 aa9.13□□□□□ -0.95
VPS11-206ENST00000614944 RCN2Q14257 317 aa9.13□□□□□ -0.95
VPS11-206ENST00000614944 PATL1Q86TB9 770 aaKnown RBP9.13□□□□□ -0.95
VPS11-206ENST00000614944 RHOT2Q8IXI1 618 aa9.13□□□□□ -0.95
VPS11-206ENST00000614944 LSMEM1Q8N8F7 131 aa9.13□□□□□ -0.95
VPS11-206ENST00000614944 C1orf127Q8N9H9 656 aa9.13□□□□□ -0.95
VPS11-206ENST00000614944 DDX1Q92499 740 aaKnown RBP9.13□□□□□ -0.95
VPS11-206ENST00000614944 PEX13Q92968 403 aa9.13□□□□□ -0.95
VPS11-206ENST00000614944 EGLN2Q96KS0 407 aa9.13□□□□□ -0.95
VPS11-206ENST00000614944 NUF2Q9BZD4 464 aa9.13□□□□□ -0.95
VPS11-206ENST00000614944 ISCUQ9H1K1 167 aa9.13□□□□□ -0.95
VPS11-206ENST00000614944 HMGXB4Q9UGU5 601 aa9.13□□□□□ -0.95
VPS11-206ENST00000614944 IPPQ9Y573 584 aa9.13□□□□□ -0.95
VPS11-206ENST00000614944 A0A0U1RQF3 1178 aa9.13□□□□□ -0.95
VPS11-206ENST00000614944 C2orf81A6NN90 581 aa9.13□□□□□ -0.95
VPS11-206ENST00000614944 PIRO00625 290 aa9.13□□□□□ -0.95
VPS11-206ENST00000614944 ACSL4O60488 711 aa9.13□□□□□ -0.95
VPS11-206ENST00000614944 SELPP16109 830 aa9.13□□□□□ -0.95
VPS11-206ENST00000614944 HMOX2P30519 316 aa9.13□□□□□ -0.95
VPS11-206ENST00000614944 CDH5P33151 784 aaPredicted RBP9.13□□□□□ -0.95
VPS11-206ENST00000614944 ASPAP45381 313 aa9.13□□□□□ -0.95
VPS11-206ENST00000614944 PTK2Q05397 1052 aa9.13□□□□□ -0.95
VPS11-206ENST00000614944 DPH6Q7L8W6 267 aa9.13□□□□□ -0.95
VPS11-206ENST00000614944 ZNF571Q7Z3V5 609 aaPredicted RBP9.13□□□□□ -0.95
VPS11-206ENST00000614944 THNSL1Q8IYQ7 743 aa9.13□□□□□ -0.95
VPS11-206ENST00000614944 PPP1R10Q96QC0 940 aaKnown RBP9.13□□□□□ -0.95
VPS11-206ENST00000614944 AGPAT1Q99943 283 aa9.13□□□□□ -0.95
VPS11-206ENST00000614944 PLVAPQ9BX97 442 aa9.13□□□□□ -0.95
VPS11-206ENST00000614944 APOBEC3GQ9HC16 384 aaKnown RBP9.13□□□□□ -0.95
VPS11-206ENST00000614944 C12orf4Q9NQ89 552 aa9.13□□□□□ -0.95
VPS11-206ENST00000614944 FAM105AQ9NUU6 356 aa9.13□□□□□ -0.95
VPS11-206ENST00000614944 DDX56Q9NY93 547 aaKnown RBP9.13□□□□□ -0.95
VPS11-206ENST00000614944 PCDHGC3Q9UN70 934 aa9.13□□□□□ -0.95
VPS11-206ENST00000614944 PIN4Q9Y237 131 aaKnown RBP9.13□□□□□ -0.95
VPS11-206ENST00000614944 STK38LQ9Y2H1 464 aa9.13□□□□□ -0.95
VPS11-206ENST00000614944 PCDHA13Q9Y5I0 950 aa9.13□□□□□ -0.95
VPS11-206ENST00000614944 FOXN3O00409 490 aaPredicted RBP9.13□□□□□ -0.95
VPS11-206ENST00000614944 ZNF263O14978 683 aa9.13□□□□□ -0.95
VPS11-206ENST00000614944 KRT86O43790 486 aa9.13□□□□□ -0.95
VPS11-206ENST00000614944 EIF2S1P05198 315 aaKnown RBP9.13□□□□□ -0.95
VPS11-206ENST00000614944 RPL9P32969 192 aaKnown RBP9.13□□□□□ -0.95
VPS11-206ENST00000614944 CDR2Q01850 454 aa9.13□□□□□ -0.95
VPS11-206ENST00000614944 SEPT6Q14141 434 aa9.13□□□□□ -0.95
VPS11-206ENST00000614944 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.13□□□□□ -0.95
VPS11-206ENST00000614944 RBBP8NLQ8NC74 664 aaPredicted RBP9.13□□□□□ -0.95
VPS11-206ENST00000614944 EPS8L1Q8TE68 723 aa9.13□□□□□ -0.95
VPS11-206ENST00000614944 NAT14Q8WUY8 206 aa9.13□□□□□ -0.95
VPS11-206ENST00000614944 ZNF518BQ9C0D4 1074 aa9.13□□□□□ -0.95
VPS11-206ENST00000614944 MTMR12Q9C0I1 747 aa9.13□□□□□ -0.95
VPS11-206ENST00000614944 DPP3Q9NY33 737 aa9.13□□□□□ -0.95
VPS11-206ENST00000614944 ZMYND8Q9ULU4 1186 aaPredicted RBP9.13□□□□□ -0.95
VPS11-206ENST00000614944 M0QX08 132 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 LSM8O95777 96 aaKnown RBP9.12□□□□□ -0.95
VPS11-206ENST00000614944 S100BP04271 92 aaPredicted RBP9.12□□□□□ -0.95
VPS11-206ENST00000614944 NFICP08651 508 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 ATF7P17544 494 aaPredicted RBP9.12□□□□□ -0.95
VPS11-206ENST00000614944 PTPN2P17706 415 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 THPOP40225 353 aa9.12□□□□□ -0.95
VPS11-206ENST00000614944 PPP2R2AP63151 447 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms