RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 RCOR2Q8IZ40 523 aa18.26■□□□□ 0.51
SREK1-216ENST00000612404 RBM41Q96IZ5 413 aaKnown RBP18.26■□□□□ 0.51
SREK1-216ENST00000612404 SNRNP25Q9BV90 132 aaKnown RBP18.26■□□□□ 0.51
SREK1-216ENST00000612404 CARD6Q9BX69 1037 aa18.26■□□□□ 0.51
SREK1-216ENST00000612404 ZNF334Q9HCZ1 680 aaPredicted RBP18.26■□□□□ 0.51
SREK1-216ENST00000612404 OLA1Q9NTK5 396 aaKnown RBP18.26■□□□□ 0.51
SREK1-216ENST00000612404 HCFC2Q9Y5Z7 792 aa18.26■□□□□ 0.51
SREK1-216ENST00000612404 PGRMC1O00264 195 aaKnown RBP18.25■□□□□ 0.51
SREK1-216ENST00000612404 PDE2AO00408 941 aaPredicted RBP18.25■□□□□ 0.51
SREK1-216ENST00000612404 MDM4O15151 490 aa18.25■□□□□ 0.51
SREK1-216ENST00000612404 CKAP4Q07065 602 aaKnown RBP18.25■□□□□ 0.51
SREK1-216ENST00000612404 ERMARDQ5T6L9 678 aa18.25■□□□□ 0.51
SREK1-216ENST00000612404 MIB1Q86YT6 1006 aa18.25■□□□□ 0.51
SREK1-216ENST00000612404 NACA2Q9H009 215 aa18.25■□□□□ 0.51
SREK1-216ENST00000612404 WDR6Q9NNW5 1121 aaKnown RBP18.25■□□□□ 0.51
SREK1-216ENST00000612404 RNF14Q9UBS8 474 aa18.25■□□□□ 0.51
SREK1-216ENST00000612404 TRIOBPQ9H2D6 2365 aa18.25■□□□□ 0.51
SREK1-216ENST00000612404 COL4A4P53420 1690 aaPredicted RBP18.25■□□□□ 0.51
SREK1-216ENST00000612404 ATG2AQ2TAZ0 1938 aa18.25■□□□□ 0.51
SREK1-216ENST00000612404 ZMYND10O75800 440 aa18.25■□□□□ 0.51
SREK1-216ENST00000612404 C1RP00736 705 aa18.25■□□□□ 0.51
SREK1-216ENST00000612404 CETN2P41208 172 aa18.25■□□□□ 0.51
SREK1-216ENST00000612404 LONRF2Q1L5Z9 754 aa18.25■□□□□ 0.51
SREK1-216ENST00000612404 ZC3H12AQ5D1E8 599 aaKnown RBP18.25■□□□□ 0.51
SREK1-216ENST00000612404 MSANTD2Q6P1R3 559 aa18.25■□□□□ 0.51
SREK1-216ENST00000612404 RASGEF1CQ8N431 466 aa18.25■□□□□ 0.51
SREK1-216ENST00000612404 ACTRT1Q8TDG2 376 aa18.25■□□□□ 0.51
SREK1-216ENST00000612404 TEKT4Q8WW24 435 aa18.25■□□□□ 0.51
SREK1-216ENST00000612404 MRPL38Q96DV4 380 aaKnown RBP18.25■□□□□ 0.51
SREK1-216ENST00000612404 SERPINB11Q96P15 392 aa18.25■□□□□ 0.51
SREK1-216ENST00000612404 CORO1BQ9BR76 489 aa18.25■□□□□ 0.51
SREK1-216ENST00000612404 WDCPQ9H6R7 721 aa18.25■□□□□ 0.51
SREK1-216ENST00000612404 DPP7Q9UHL4 492 aa18.25■□□□□ 0.51
SREK1-216ENST00000612404 RASAL2Q9UJF2 1139 aa18.25■□□□□ 0.51
SREK1-216ENST00000612404 REV3LO60673 3130 aa18.24■□□□□ 0.51
SREK1-216ENST00000612404 IRAK2O43187 625 aa18.24■□□□□ 0.51
SREK1-216ENST00000612404 IGLV3-25P01717 112 aa18.24■□□□□ 0.51
SREK1-216ENST00000612404 CDH6P55285 790 aa18.24■□□□□ 0.51
SREK1-216ENST00000612404 KRT81Q14533 505 aa18.24■□□□□ 0.51
SREK1-216ENST00000612404 ZNF697Q5TEC3 545 aa18.24■□□□□ 0.51
SREK1-216ENST00000612404 MFSD7Q6UXD7 560 aa18.24■□□□□ 0.51
SREK1-216ENST00000612404 RTL10Q7L3V2 364 aa18.24■□□□□ 0.51
SREK1-216ENST00000612404 ADAT2Q7Z6V5 191 aaKnown RBP18.24■□□□□ 0.51
SREK1-216ENST00000612404 HS6ST3Q8IZP7 471 aa18.24■□□□□ 0.51
SREK1-216ENST00000612404 CEP112Q8N8E3 955 aa18.24■□□□□ 0.51
SREK1-216ENST00000612404 MNS1Q8NEH6 495 aa18.24■□□□□ 0.51
SREK1-216ENST00000612404 CDK5RAP1Q96SZ6 601 aaKnown RBP18.24■□□□□ 0.51
SREK1-216ENST00000612404 CALN1Q9BXU9 219 aa18.24■□□□□ 0.51
SREK1-216ENST00000612404 DHX35Q9H5Z1 703 aaKnown RBP18.24■□□□□ 0.51
SREK1-216ENST00000612404 TMPRSS4Q9NRS4 437 aa18.24■□□□□ 0.51
SREK1-216ENST00000612404 MARCH2Q9P0N8 246 aa18.24■□□□□ 0.51
SREK1-216ENST00000612404 AP4E1Q9UPM8 1137 aa18.24■□□□□ 0.51
SREK1-216ENST00000612404 TADA3O75528 432 aa18.23■□□□□ 0.51
SREK1-216ENST00000612404 KDELR1P24390 212 aa18.23■□□□□ 0.51
SREK1-216ENST00000612404 PPP3CCP48454 512 aa18.23■□□□□ 0.51
SREK1-216ENST00000612404 CXCR3P49682 368 aa18.23■□□□□ 0.51
SREK1-216ENST00000612404 RBM10P98175 930 aaKnown RBP18.23■□□□□ 0.51
SREK1-216ENST00000612404 CA9Q16790 459 aa18.23■□□□□ 0.51
SREK1-216ENST00000612404 ARL13BQ3SXY8 428 aa18.23■□□□□ 0.51
SREK1-216ENST00000612404 PABPC1LQ4VXU2 614 aaKnown RBP18.23■□□□□ 0.51
SREK1-216ENST00000612404 PPP6R3Q5H9R7 873 aaPredicted RBP18.23■□□□□ 0.51
SREK1-216ENST00000612404 HECTD3Q5T447 861 aa18.23■□□□□ 0.51
SREK1-216ENST00000612404 SNX30Q5VWJ9 437 aa18.23■□□□□ 0.51
SREK1-216ENST00000612404 ELMSAN1Q6PJG2 1045 aa18.23■□□□□ 0.51
SREK1-216ENST00000612404 TADA2BQ86TJ2 420 aa18.23■□□□□ 0.51
SREK1-216ENST00000612404 CMASQ8NFW8 434 aaPredicted RBP18.23■□□□□ 0.51
SREK1-216ENST00000612404 HEMGNQ9BXL5 484 aa18.23■□□□□ 0.51
SREK1-216ENST00000612404 ZNF576Q9H609 170 aa18.23■□□□□ 0.51
SREK1-216ENST00000612404 ASAH2Q9NR71 780 aa18.23■□□□□ 0.51
SREK1-216ENST00000612404 FZD10Q9ULW2 581 aa18.23■□□□□ 0.51
SREK1-216ENST00000612404 SZT2Q5T011 3432 aa18.23■□□□□ 0.51
SREK1-216ENST00000612404 CD48P09326 243 aa18.23■□□□□ 0.51
SREK1-216ENST00000612404 MYL4P12829 197 aa18.23■□□□□ 0.51
SREK1-216ENST00000612404 GABRR2P28476 465 aa18.23■□□□□ 0.51
SREK1-216ENST00000612404 DUSP6Q16828 381 aa18.23■□□□□ 0.51
SREK1-216ENST00000612404 KAZNQ674X7 775 aa18.23■□□□□ 0.51
SREK1-216ENST00000612404 SPOCD1Q6ZMY3 1216 aa18.23■□□□□ 0.51
SREK1-216ENST00000612404 TMEM150AQ86TG1 271 aa18.23■□□□□ 0.51
SREK1-216ENST00000612404 HDAC7Q8WUI4 952 aa18.23■□□□□ 0.51
SREK1-216ENST00000612404 PPP2R3CQ969Q6 453 aa18.23■□□□□ 0.51
SREK1-216ENST00000612404 NAP1L3Q99457 506 aaPredicted RBP18.23■□□□□ 0.51
SREK1-216ENST00000612404 MAGEB5Q9BZ81 275 aa18.23■□□□□ 0.51
SREK1-216ENST00000612404 TKTL2Q9H0I9 626 aa18.23■□□□□ 0.51
SREK1-216ENST00000612404 IGFLR1Q9H665 355 aa18.23■□□□□ 0.51
SREK1-216ENST00000612404 HCFC1R1Q9NWW0 138 aa18.23■□□□□ 0.51
SREK1-216ENST00000612404 F11P03951 625 aa18.22■□□□□ 0.51
SREK1-216ENST00000612404 ADRA1BP35368 520 aa18.22■□□□□ 0.51
SREK1-216ENST00000612404 ATP5C1P36542 298 aaKnown RBP18.22■□□□□ 0.51
SREK1-216ENST00000612404 EFHC2Q5JST6 749 aa18.22■□□□□ 0.51
SREK1-216ENST00000612404 ANKS1BQ7Z6G8 1248 aa18.22■□□□□ 0.51
SREK1-216ENST00000612404 MAP7D3Q8IWC1 876 aa18.22■□□□□ 0.51
SREK1-216ENST00000612404 OSBPL8Q9BZF1 889 aa18.22■□□□□ 0.51
SREK1-216ENST00000612404 IL21Q9HBE4 155 aa18.22■□□□□ 0.51
SREK1-216ENST00000612404 TRPC7Q9HCX4 862 aa18.22■□□□□ 0.51
SREK1-216ENST00000612404 DNMT3LQ9UJW3 386 aa18.22■□□□□ 0.51
SREK1-216ENST00000612404 TTC7AQ9ULT0 858 aaPredicted RBP18.22■□□□□ 0.51
SREK1-216ENST00000612404 TLR6Q9Y2C9 796 aa18.22■□□□□ 0.51
SREK1-216ENST00000612404 SLC12A8A0AV02 714 aa18.22■□□□□ 0.51
SREK1-216ENST00000612404 CTAGE15A4D2H0 777 aa18.22■□□□□ 0.51
SREK1-216ENST00000612404 C2orf78A6NCI8 922 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms