RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 ZNF570Q96NI8 536 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 LGMNQ99538 433 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 CADM1Q9BY67 442 aaKnown RBP7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 FRMD8Q9BZ67 464 aaPredicted RBP7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 RNPEPQ9H4A4 650 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 FAM96AQ9H5X1 160 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 TMEM134Q9H6X4 195 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 SNTG2Q9NY99 539 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 NENFQ9UMX5 172 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 THSD7AQ9UPZ6 1657 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 MYH7BA7E2Y1 1941 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 ZNF831Q5JPB2 1677 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 ATRNL1Q5VV63 1379 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 DPPA5A6NC42 116 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 TTLL13PA6NNM8 815 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 UGT1A9O60656 530 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 NOL3O60936 208 aaKnown RBP7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 C6orf222P0C671 652 aaPredicted RBP7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 TPBGLP0DKB5 382 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 ATP6V1C1P21283 382 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 ACO1P21399 889 aaKnown RBP7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 CCNHP51946 323 aaPredicted RBP7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 ZNF143P52747 638 aaPredicted RBP7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 GPX6P59796 221 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 PDK1Q15118 436 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 TRMT5Q32P41 509 aaKnown RBP7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 LRRC23Q53EV4 343 aaPredicted RBP7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 HSP90AA5PQ58FG0 334 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 RIPOR1Q6ZS17 1223 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 KIAA0319LQ8IZA0 1049 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 TTC39CQ8N584 583 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 C10orf82Q8WW14 230 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 USP13Q92995 863 aaPredicted RBP7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 TNIP3Q96KP6 325 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 KCNK16Q96T55 309 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 NACA2Q9H009 215 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 DHX33Q9H6R0 707 aaKnown RBP7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 UGT1A7Q9HAW7 530 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 UGT1A10Q9HAW8 530 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 UGT1A8Q9HAW9 530 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 THAP1Q9NVV9 213 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 SOX13Q9UN79 622 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 FAF1Q9UNN5 650 aaPredicted RBP7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 SNCAIPQ9Y6H5 919 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 SPDYE16A6NNV3 312 aaPredicted RBP7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 GMNNO75496 209 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 NCAM1P13591 858 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 CCDC130P13994 396 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 PAPOLAP51003 745 aaKnown RBP7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 PRAMEP78395 509 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 GBE1Q04446 702 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 ACVR2BQ13705 512 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 PCSK7Q16549 785 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 PDPK2PQ6A1A2 396 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 IYDQ6PHW0 289 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 ADGRD1Q6QNK2 874 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 RINLQ6ZS11 566 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 SCN4BQ8IWT1 228 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 TMEM192Q8IY95 271 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 TNS4Q8IZW8 715 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 RBM15BQ8NDT2 890 aaKnown RBP7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 GSTCDQ8NEC7 633 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 DNERQ8NFT8 737 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 SLC44A1Q8WWI5 657 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 ZNF184Q99676 751 aaPredicted RBP7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 DDIT4Q9NX09 232 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 TAS2R1Q9NYW7 299 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 ARHGAP26Q9UNA1 814 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 AFG3L2Q9Y4W6 797 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 WASF2Q9Y6W5 498 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 RNF103O00237 685 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 TPP1O14773 563 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 MAGEB2O15479 319 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 GRIN3BO60391 1043 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 MAFO75444 373 aaPredicted RBP7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 MSX2P35548 267 aaPredicted RBP7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 ARPP19P56211 112 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 FSTL1Q12841 308 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 TMED1Q13445 227 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 FLOT2Q14254 428 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 RARS2Q5T160 578 aaKnown RBP7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 TMCO4Q5TGY1 634 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 TRMT10BQ6PF06 316 aaKnown RBP7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 CATSPERGQ6ZRH7 1159 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 TAS1R3Q7RTX0 852 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 LRRC43Q8N309 656 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 REPS2Q8NFH8 660 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 C7orf43Q8WVR3 580 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 HTR3CQ8WXA8 447 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 CNBD2Q96M20 576 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 PDGFDQ9GZP0 370 aaPredicted RBP7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 ELOVL4Q9GZR5 314 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 PLEKHA5Q9HAU0 1116 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 CYP3A43Q9HB55 503 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 CYP4F12Q9HCS2 524 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 PFDN4Q9NQP4 134 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 IARS2Q9NSE4 1012 aaKnown RBP7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 KCNK4Q9NYG8 393 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 HMGXB4Q9UGU5 601 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms