RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 MSI1O43347 362 aaKnown RBP13.33□□□□□ -0.28
CD9-212ENST00000610354 LAMTOR5O43504 91 aa13.33□□□□□ -0.28
CD9-212ENST00000610354 CHRNB2P17787 502 aa13.33□□□□□ -0.28
CD9-212ENST00000610354 DRD1P21728 446 aa13.33□□□□□ -0.28
CD9-212ENST00000610354 CORO1AP31146 461 aaKnown RBP13.33□□□□□ -0.28
CD9-212ENST00000610354 ACADSBP45954 432 aa13.33□□□□□ -0.28
CD9-212ENST00000610354 COG7P83436 770 aa13.33□□□□□ -0.28
CD9-212ENST00000610354 AMPD2Q01433 879 aa13.33□□□□□ -0.28
CD9-212ENST00000610354 UBXN1Q04323 297 aa13.33□□□□□ -0.28
CD9-212ENST00000610354 CSTF1Q05048 431 aaKnown RBP13.33□□□□□ -0.28
CD9-212ENST00000610354 GRSF1Q12849 480 aaKnown RBP eCLIP13.33□□□□□ -0.28
CD9-212ENST00000610354 TAF5Q15542 800 aa13.33□□□□□ -0.28
CD9-212ENST00000610354 PTPN20Q4JDL3 420 aa13.33□□□□□ -0.28
CD9-212ENST00000610354 SYPL2Q5VXT5 272 aa13.33□□□□□ -0.28
CD9-212ENST00000610354 SYNPOQ8N3V7 929 aa13.33□□□□□ -0.28
CD9-212ENST00000610354 SPEM1Q8N4L4 309 aa13.33□□□□□ -0.28
CD9-212ENST00000610354 NAT16Q8N8M0 369 aa13.33□□□□□ -0.28
CD9-212ENST00000610354 NAT10Q9H0A0 1025 aaKnown RBP13.33□□□□□ -0.28
CD9-212ENST00000610354 OLA1Q9NTK5 396 aaKnown RBP13.33□□□□□ -0.28
CD9-212ENST00000610354 FBXO4Q9UKT5 387 aa13.33□□□□□ -0.28
CD9-212ENST00000610354 AGO1Q9UL18 857 aaKnown RBP13.33□□□□□ -0.28
CD9-212ENST00000610354 NAALADL1Q9UQQ1 740 aa13.33□□□□□ -0.28
CD9-212ENST00000610354 A0A0A0MRY4 1105 aa13.32□□□□□ -0.28
CD9-212ENST00000610354 FAM170AA1A519 330 aa13.32□□□□□ -0.28
CD9-212ENST00000610354 SMTNL1A8MU46 457 aa13.32□□□□□ -0.28
CD9-212ENST00000610354 K7ESF4 209 aa13.32□□□□□ -0.28
CD9-212ENST00000610354 GFRA2O00451 464 aa13.32□□□□□ -0.28
CD9-212ENST00000610354 RNF40O75150 1001 aa13.32□□□□□ -0.28
CD9-212ENST00000610354 GFPT2O94808 682 aa13.32□□□□□ -0.28
CD9-212ENST00000610354 ADH1CP00326 375 aa13.32□□□□□ -0.28
CD9-212ENST00000610354 IGLV3-27P01718 113 aa13.32□□□□□ -0.28
CD9-212ENST00000610354 ERBB2P04626 1255 aa13.32□□□□□ -0.28
CD9-212ENST00000610354 TPM2P07951 284 aa13.32□□□□□ -0.28
CD9-212ENST00000610354 CDH5P33151 784 aaPredicted RBP13.32□□□□□ -0.28
CD9-212ENST00000610354 NBL1P41271 181 aa13.32□□□□□ -0.28
CD9-212ENST00000610354 BPIFB4P59827 614 aa13.32□□□□□ -0.28
CD9-212ENST00000610354 PITX1P78337 314 aaPredicted RBP13.32□□□□□ -0.28
CD9-212ENST00000610354 GAD2Q05329 585 aa13.32□□□□□ -0.28
CD9-212ENST00000610354 GOLGA8FQ08AF8 430 aa13.32□□□□□ -0.28
CD9-212ENST00000610354 DMWDQ09019 674 aa13.32□□□□□ -0.28
CD9-212ENST00000610354 GOLGA8DPQ0D2H9 430 aa13.32□□□□□ -0.28
CD9-212ENST00000610354 ZSCAN23Q3MJ62 389 aa13.32□□□□□ -0.28
CD9-212ENST00000610354 TAF3Q5VWG9 929 aa13.32□□□□□ -0.28
CD9-212ENST00000610354 TPGS1Q6ZTW0 290 aa13.32□□□□□ -0.28
CD9-212ENST00000610354 DENND1CQ8IV53 801 aa13.32□□□□□ -0.28
CD9-212ENST00000610354 FAM217AQ8IXS0 508 aa13.32□□□□□ -0.28
CD9-212ENST00000610354 EPS8L1Q8TE68 723 aa13.32□□□□□ -0.28
CD9-212ENST00000610354 RNF139Q8WU17 664 aa13.32□□□□□ -0.28
CD9-212ENST00000610354 SLC20A1Q8WUM9 679 aa13.32□□□□□ -0.28
CD9-212ENST00000610354 PPP1R13BQ96KQ4 1090 aa13.32□□□□□ -0.28
CD9-212ENST00000610354 NAP1L5Q96NT1 182 aaPredicted RBP13.32□□□□□ -0.28
CD9-212ENST00000610354 IER2Q9BTL4 223 aa13.32□□□□□ -0.28
CD9-212ENST00000610354 MARK1Q9P0L2 795 aa13.32□□□□□ -0.28
CD9-212ENST00000610354 NOCTQ9UK39 431 aaKnown RBP13.32□□□□□ -0.28
CD9-212ENST00000610354 LSM7Q9UK45 103 aaKnown RBP13.32□□□□□ -0.28
CD9-212ENST00000610354 HCN2Q9UL51 889 aa13.32□□□□□ -0.28
CD9-212ENST00000610354 STRIP2Q9ULQ0 834 aa13.32□□□□□ -0.28
CD9-212ENST00000610354 HBS1LQ9Y450 684 aaKnown RBP13.32□□□□□ -0.28
CD9-212ENST00000610354 R4GN57 208 aa13.32□□□□□ -0.28
CD9-212ENST00000610354 CHURC1-FNTBB4DL54 471 aa13.31□□□□□ -0.28
CD9-212ENST00000610354 TULP3O75386 442 aa13.31□□□□□ -0.28
CD9-212ENST00000610354 MMEP08473 750 aa13.31□□□□□ -0.28
CD9-212ENST00000610354 PTMSP20962 102 aa13.31□□□□□ -0.28
CD9-212ENST00000610354 KRT9P35527 623 aa13.31□□□□□ -0.28
CD9-212ENST00000610354 SOX5P35711 763 aa13.31□□□□□ -0.28
CD9-212ENST00000610354 CXCL12P48061 93 aa13.31□□□□□ -0.28
CD9-212ENST00000610354 KDSRQ06136 332 aa13.31□□□□□ -0.28
CD9-212ENST00000610354 ANO4Q32M45 955 aa13.31□□□□□ -0.28
CD9-212ENST00000610354 ZNF528Q3MIS6 628 aa13.31□□□□□ -0.28
CD9-212ENST00000610354 EMC10Q5UCC4 262 aa13.31□□□□□ -0.28
CD9-212ENST00000610354 FAM183BPQ6ZVS7 135 aa13.31□□□□□ -0.28
CD9-212ENST00000610354 LUZP1Q86V48 1076 aa13.31□□□□□ -0.28
CD9-212ENST00000610354 ANKRD20A12PQ8NF67 263 aa13.31□□□□□ -0.28
CD9-212ENST00000610354 DQX1Q8TE96 717 aaKnown RBP13.31□□□□□ -0.28
CD9-212ENST00000610354 FAM149B1Q96BN6 582 aa13.31□□□□□ -0.28
CD9-212ENST00000610354 PLD4Q96BZ4 506 aa13.31□□□□□ -0.28
CD9-212ENST00000610354 PNKPQ96T60 521 aa13.31□□□□□ -0.28
CD9-212ENST00000610354 DCLK3Q9C098 648 aa13.31□□□□□ -0.28
CD9-212ENST00000610354 IRF2BPLQ9H1B7 796 aa13.31□□□□□ -0.28
CD9-212ENST00000610354 PLK2Q9NYY3 685 aa13.31□□□□□ -0.28
CD9-212ENST00000610354 EML5Q05BV3 1969 aa13.31□□□□□ -0.28
CD9-212ENST00000610354 VPS13AQ96RL7 3174 aa13.3□□□□□ -0.28
CD9-212ENST00000610354 PIEZO1Q92508 2521 aa13.3□□□□□ -0.28
CD9-212ENST00000610354 ZFHX2Q9C0A1 2572 aaPredicted RBP13.3□□□□□ -0.28
CD9-212ENST00000610354 A0A1B0GTH6 734 aa13.3□□□□□ -0.28
CD9-212ENST00000610354 PROB1E7EW31 1015 aa13.3□□□□□ -0.28
CD9-212ENST00000610354 NEDD8-MDP1E9PL57 170 aa13.3□□□□□ -0.28
CD9-212ENST00000610354 KAT7O95251 611 aa13.3□□□□□ -0.28
CD9-212ENST00000610354 PAPSS2O95340 614 aaPredicted RBP13.3□□□□□ -0.28
CD9-212ENST00000610354 PENKP01210 267 aaPredicted RBP13.3□□□□□ -0.28
CD9-212ENST00000610354 CISD3P0C7P0 127 aa13.3□□□□□ -0.28
CD9-212ENST00000610354 NCAM1P13591 858 aa13.3□□□□□ -0.28
CD9-212ENST00000610354 TYRP14679 529 aa13.3□□□□□ -0.28
CD9-212ENST00000610354 EIF2DP41214 584 aaKnown RBP13.3□□□□□ -0.28
CD9-212ENST00000610354 CCR3P51677 355 aa13.3□□□□□ -0.28
CD9-212ENST00000610354 SEC13P55735 322 aa13.3□□□□□ -0.28
CD9-212ENST00000610354 FMO1Q01740 532 aa13.3□□□□□ -0.28
CD9-212ENST00000610354 EIF4EBP2Q13542 120 aaPredicted RBP13.3□□□□□ -0.28
CD9-212ENST00000610354 SKOR2Q2VWA4 1001 aaPredicted RBP13.3□□□□□ -0.28
CD9-212ENST00000610354 FYB2Q5VWT5 728 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms