RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 BDNFP23560 247 aa16.49■□□□□ 0.23
CTSA-214ENST00000606788 ATP5DP30049 168 aa16.49■□□□□ 0.23
CTSA-214ENST00000606788 SLC8A3P57103 927 aa16.49■□□□□ 0.23
CTSA-214ENST00000606788 CDC42EP1Q00587 391 aa16.49■□□□□ 0.23
CTSA-214ENST00000606788 ARHGAP17Q68EM7 881 aa16.49■□□□□ 0.23
CTSA-214ENST00000606788 SLC26A9Q7LBE3 791 aa16.49■□□□□ 0.23
CTSA-214ENST00000606788 ATP11CQ8NB49 1132 aa16.49■□□□□ 0.23
CTSA-214ENST00000606788 SMC6Q96SB8 1091 aa16.49■□□□□ 0.23
CTSA-214ENST00000606788 ADAM2Q99965 735 aa16.49■□□□□ 0.23
CTSA-214ENST00000606788 TRPV2Q9Y5S1 764 aa16.49■□□□□ 0.23
CTSA-214ENST00000606788 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.49■□□□□ 0.23
CTSA-214ENST00000606788 MFSD11O43934 449 aa16.49■□□□□ 0.23
CTSA-214ENST00000606788 PRKAR2AP13861 404 aaKnown RBP16.49■□□□□ 0.23
CTSA-214ENST00000606788 AXLP30530 894 aa16.49■□□□□ 0.23
CTSA-214ENST00000606788 MSH2P43246 934 aa16.49■□□□□ 0.23
CTSA-214ENST00000606788 GSCP56915 257 aaPredicted RBP16.49■□□□□ 0.23
CTSA-214ENST00000606788 YWHAZP63104 245 aaKnown RBP16.49■□□□□ 0.23
CTSA-214ENST00000606788 SDHAF4Q5VUM1 108 aa16.49■□□□□ 0.23
CTSA-214ENST00000606788 DUSP16Q9BY84 665 aa16.49■□□□□ 0.23
CTSA-214ENST00000606788 TTLL3Q9Y4R7 772 aa16.49■□□□□ 0.23
CTSA-214ENST00000606788 TCRBV9S1A1TA0A576 114 aa16.48■□□□□ 0.23
CTSA-214ENST00000606788 CXorf49A8MYA2 514 aaPredicted RBP16.48■□□□□ 0.23
CTSA-214ENST00000606788 ENDOD1O94919 500 aa16.48■□□□□ 0.23
CTSA-214ENST00000606788 FAM200BP0CF97 657 aa16.48■□□□□ 0.23
CTSA-214ENST00000606788 MAGEA9P43362 315 aa16.48■□□□□ 0.23
CTSA-214ENST00000606788 SESN2P58004 480 aaPredicted RBP16.48■□□□□ 0.23
CTSA-214ENST00000606788 ACAP1Q15027 740 aa16.48■□□□□ 0.23
CTSA-214ENST00000606788 CROCCP2Q86T23 111 aa16.48■□□□□ 0.23
CTSA-214ENST00000606788 TTC39CQ8N584 583 aa16.48■□□□□ 0.23
CTSA-214ENST00000606788 SPC25Q9HBM1 224 aa16.48■□□□□ 0.23
CTSA-214ENST00000606788 DTLQ9NZJ0 730 aa16.48■□□□□ 0.23
CTSA-214ENST00000606788 FAM47DPA6NHR8 397 aa16.48■□□□□ 0.23
CTSA-214ENST00000606788 IRX4P78413 519 aa16.48■□□□□ 0.23
CTSA-214ENST00000606788 DEUP1Q05D60 604 aa16.48■□□□□ 0.23
CTSA-214ENST00000606788 MFSD14CQ5VZR4 134 aa16.48■□□□□ 0.23
CTSA-214ENST00000606788 SOCS4Q8WXH5 440 aa16.48■□□□□ 0.23
CTSA-214ENST00000606788 SMOQ99835 787 aa16.48■□□□□ 0.23
CTSA-214ENST00000606788 GDAP2Q9NXN4 497 aa16.48■□□□□ 0.23
CTSA-214ENST00000606788 SLC17A7Q9P2U7 560 aa16.48■□□□□ 0.23
CTSA-214ENST00000606788 EFR3BQ9Y2G0 817 aa16.48■□□□□ 0.23
CTSA-214ENST00000606788 TOP3BO95985 862 aaKnown RBP16.47■□□□□ 0.23
CTSA-214ENST00000606788 VAV1P15498 845 aa16.47■□□□□ 0.23
CTSA-214ENST00000606788 ADRA1DP25100 572 aa16.47■□□□□ 0.23
CTSA-214ENST00000606788 ARL4AP40617 200 aa16.47■□□□□ 0.23
CTSA-214ENST00000606788 PNPLA4P41247 253 aa16.47■□□□□ 0.23
CTSA-214ENST00000606788 GEMIN4P57678 1058 aaKnown RBP16.47■□□□□ 0.23
CTSA-214ENST00000606788 MRPS5P82675 430 aaKnown RBP16.47■□□□□ 0.23
CTSA-214ENST00000606788 FAAP100Q0VG06 881 aa16.47■□□□□ 0.23
CTSA-214ENST00000606788 OVGP1Q12889 678 aa16.47■□□□□ 0.23
CTSA-214ENST00000606788 PDK2Q15119 407 aa16.47■□□□□ 0.23
CTSA-214ENST00000606788 TAF2Q6P1X5 1199 aa16.47■□□□□ 0.23
CTSA-214ENST00000606788 TRMT10BQ6PF06 316 aaKnown RBP16.47■□□□□ 0.23
CTSA-214ENST00000606788 TTC25Q96NG3 672 aa16.47■□□□□ 0.23
CTSA-214ENST00000606788 SIK2Q9H0K1 926 aa16.47■□□□□ 0.23
CTSA-214ENST00000606788 I6L893 689 aaPredicted RBP16.47■□□□□ 0.23
CTSA-214ENST00000606788 SLC10A3P09131 477 aa16.47■□□□□ 0.23
CTSA-214ENST00000606788 RDXP35241 583 aaKnown RBP16.47■□□□□ 0.23
CTSA-214ENST00000606788 MATKP42679 507 aa16.47■□□□□ 0.23
CTSA-214ENST00000606788 LVRNQ6Q4G3 990 aa16.47■□□□□ 0.23
CTSA-214ENST00000606788 C6orf89Q6UWU4 347 aa16.47■□□□□ 0.23
CTSA-214ENST00000606788 PCGF5Q86SE9 256 aa16.47■□□□□ 0.23
CTSA-214ENST00000606788 SCAMP5Q8TAC9 235 aa16.47■□□□□ 0.23
CTSA-214ENST00000606788 DDIT4Q9NX09 232 aa16.47■□□□□ 0.23
CTSA-214ENST00000606788 PSMC3IPQ9P2W1 217 aaPredicted RBP16.47■□□□□ 0.23
CTSA-214ENST00000606788 IKBKGQ9Y6K9 419 aa16.47■□□□□ 0.23
CTSA-214ENST00000606788 ZNF638Q14966 1978 aaKnown RBP16.47■□□□□ 0.23
CTSA-214ENST00000606788 SETSIPP0DME0 302 aa16.47■□□□□ 0.23
CTSA-214ENST00000606788 NEFHP12036 1026 aa16.47■□□□□ 0.23
CTSA-214ENST00000606788 CYBAP13498 195 aa16.47■□□□□ 0.23
CTSA-214ENST00000606788 STIP1P31948 543 aaKnown RBP16.47■□□□□ 0.23
CTSA-214ENST00000606788 GMPRP36959 345 aa16.47■□□□□ 0.23
CTSA-214ENST00000606788 SEPT7Q16181 437 aaKnown RBP16.47■□□□□ 0.23
CTSA-214ENST00000606788 OTUD1Q5VV17 481 aaPredicted RBP16.47■□□□□ 0.23
CTSA-214ENST00000606788 NCBP2-AS2Q69YL0 99 aa16.47■□□□□ 0.23
CTSA-214ENST00000606788 HEATR6Q6AI08 1181 aaKnown RBP16.47■□□□□ 0.23
CTSA-214ENST00000606788 ARHGEF18Q6ZSZ5 1173 aa16.47■□□□□ 0.23
CTSA-214ENST00000606788 FAM35AQ86V20 835 aa16.47■□□□□ 0.23
CTSA-214ENST00000606788 ZMIZ2Q8NF64 920 aa16.47■□□□□ 0.23
CTSA-214ENST00000606788 RNF34Q969K3 372 aa16.47■□□□□ 0.23
CTSA-214ENST00000606788 FAXDC2Q96IV6 333 aa16.47■□□□□ 0.23
CTSA-214ENST00000606788 APOL2Q9BQE5 337 aa16.47■□□□□ 0.23
CTSA-214ENST00000606788 TMLHEQ9NVH6 421 aa16.47■□□□□ 0.23
CTSA-214ENST00000606788 RNF186Q9NXI6 227 aa16.47■□□□□ 0.23
CTSA-214ENST00000606788 ZC3H7BQ9UGR2 993 aaKnown RBP16.47■□□□□ 0.23
CTSA-214ENST00000606788 HHATQ5VTY9 493 aa16.46■□□□□ 0.23
CTSA-214ENST00000606788 RSPH3Q86UC2 560 aa16.46■□□□□ 0.23
CTSA-214ENST00000606788 PDCD7Q8N8D1 485 aaKnown RBP16.46■□□□□ 0.23
CTSA-214ENST00000606788 CELF6Q96J87 481 aaKnown RBP16.46■□□□□ 0.23
CTSA-214ENST00000606788 EURLQ9NYK6 297 aa16.46■□□□□ 0.23
CTSA-214ENST00000606788 UBP1Q9NZI7 540 aa16.46■□□□□ 0.23
CTSA-214ENST00000606788 PRG3Q9Y2Y8 225 aaPredicted RBP16.46■□□□□ 0.23
CTSA-214ENST00000606788 XPO1O14980 1071 aaKnown RBP16.46■□□□□ 0.23
CTSA-214ENST00000606788 SRGAP2BP0DMP2 458 aa16.46■□□□□ 0.23
CTSA-214ENST00000606788 PTK7Q13308 1070 aa16.46■□□□□ 0.23
CTSA-214ENST00000606788 KCNJ11Q14654 390 aa16.46■□□□□ 0.23
CTSA-214ENST00000606788 GPR152Q8TDT2 470 aa16.46■□□□□ 0.23
CTSA-214ENST00000606788 CKAP2Q8WWK9 683 aa16.46■□□□□ 0.23
CTSA-214ENST00000606788 CENPTQ96BT3 561 aa16.46■□□□□ 0.23
CTSA-214ENST00000606788 HNRNPABQ99729 332 aaKnown RBP16.46■□□□□ 0.23
CTSA-214ENST00000606788 SLC13A1Q9BZW2 595 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms