RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 ATP2A3Q93084 1043 aa14.9□□□□□ -0.02
CTSA-211ENST00000606066 OTUB2Q96DC9 234 aa14.9□□□□□ -0.02
CTSA-211ENST00000606066 SHDQ96IW2 340 aa14.9□□□□□ -0.02
CTSA-211ENST00000606066 FAM83CQ9BQN1 747 aa14.9□□□□□ -0.02
CTSA-211ENST00000606066 SYT11Q9BT88 431 aa14.9□□□□□ -0.02
CTSA-211ENST00000606066 DCLK3Q9C098 648 aa14.9□□□□□ -0.02
CTSA-211ENST00000606066 NAALADL1Q9UQQ1 740 aa14.9□□□□□ -0.02
CTSA-211ENST00000606066 ZNF510Q9Y2H8 683 aa14.9□□□□□ -0.02
CTSA-211ENST00000606066 HBS1LQ9Y450 684 aaKnown RBP14.9□□□□□ -0.02
CTSA-211ENST00000606066 AKR1B15C9JRZ8 316 aaPredicted RBP14.89□□□□□ -0.03
CTSA-211ENST00000606066 ARNTLO00327 626 aa14.89□□□□□ -0.03
CTSA-211ENST00000606066 MFAP3LO75121 409 aa14.89□□□□□ -0.03
CTSA-211ENST00000606066 NFATC1O95644 943 aa14.89□□□□□ -0.03
CTSA-211ENST00000606066 FYNP06241 537 aa14.89□□□□□ -0.03
CTSA-211ENST00000606066 IRF1P10914 325 aa14.89□□□□□ -0.03
CTSA-211ENST00000606066 GZMAP12544 262 aa14.89□□□□□ -0.03
CTSA-211ENST00000606066 GLULP15104 373 aa14.89□□□□□ -0.03
CTSA-211ENST00000606066 MLLT6P55198 1093 aaPredicted RBP14.89□□□□□ -0.03
CTSA-211ENST00000606066 CDK17Q00537 523 aa14.89□□□□□ -0.03
CTSA-211ENST00000606066 AMPD2Q01433 879 aa14.89□□□□□ -0.03
CTSA-211ENST00000606066 PRKCQQ04759 706 aa14.89□□□□□ -0.03
CTSA-211ENST00000606066 C1QBPQ07021 282 aaKnown RBP14.89□□□□□ -0.03
CTSA-211ENST00000606066 NR1H3Q13133 447 aa14.89□□□□□ -0.03
CTSA-211ENST00000606066 RUNX3Q13761 415 aa14.89□□□□□ -0.03
CTSA-211ENST00000606066 ARID5BQ14865 1188 aa14.89□□□□□ -0.03
CTSA-211ENST00000606066 SLC44A4Q53GD3 710 aa14.89□□□□□ -0.03
CTSA-211ENST00000606066 DCAF6Q58WW2 860 aa14.89□□□□□ -0.03
CTSA-211ENST00000606066 FAM102AQ5T9C2 384 aaPredicted RBP14.89□□□□□ -0.03
CTSA-211ENST00000606066 HGSNATQ68CP4 663 aa14.89□□□□□ -0.03
CTSA-211ENST00000606066 C1orf228Q6PIY5 440 aa14.89□□□□□ -0.03
CTSA-211ENST00000606066 HTR3DQ70Z44 454 aa14.89□□□□□ -0.03
CTSA-211ENST00000606066 RIN3Q8TB24 985 aa14.89□□□□□ -0.03
CTSA-211ENST00000606066 NKD2Q969F2 451 aaPredicted RBP14.89□□□□□ -0.03
CTSA-211ENST00000606066 PLD4Q96BZ4 506 aa14.89□□□□□ -0.03
CTSA-211ENST00000606066 MSANTD3Q96H12 275 aa14.89□□□□□ -0.03
CTSA-211ENST00000606066 VCPIP1Q96JH7 1222 aa14.89□□□□□ -0.03
CTSA-211ENST00000606066 ZFYVE19Q96K21 471 aa14.89□□□□□ -0.03
CTSA-211ENST00000606066 SERPINB11Q96P15 392 aa14.89□□□□□ -0.03
CTSA-211ENST00000606066 SLC2A13Q96QE2 648 aa14.89□□□□□ -0.03
CTSA-211ENST00000606066 DNAJC7Q99615 494 aa14.89□□□□□ -0.03
CTSA-211ENST00000606066 C11orf70Q9BRQ4 267 aa14.89□□□□□ -0.03
CTSA-211ENST00000606066 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.89□□□□□ -0.03
CTSA-211ENST00000606066 MFSD1Q9H3U5 465 aa14.89□□□□□ -0.03
CTSA-211ENST00000606066 ARHGEF3Q9NR81 526 aa14.89□□□□□ -0.03
CTSA-211ENST00000606066 TMEM51Q9NW97 253 aa14.89□□□□□ -0.03
CTSA-211ENST00000606066 RRN3Q9NYV6 651 aa14.89□□□□□ -0.03
CTSA-211ENST00000606066 SFMBT1Q9UHJ3 866 aa14.89□□□□□ -0.03
CTSA-211ENST00000606066 WNT6Q9Y6F9 365 aa14.89□□□□□ -0.03
CTSA-211ENST00000606066 MYH10P35580 1976 aa14.89□□□□□ -0.03
CTSA-211ENST00000606066 DAB1O75553 588 aa14.88□□□□□ -0.03
CTSA-211ENST00000606066 STC2O76061 302 aa14.88□□□□□ -0.03
CTSA-211ENST00000606066 HMBSP08397 361 aa14.88□□□□□ -0.03
CTSA-211ENST00000606066 AOC1P19801 751 aa14.88□□□□□ -0.03
CTSA-211ENST00000606066 GBP1P32455 592 aa14.88□□□□□ -0.03
CTSA-211ENST00000606066 NOS2P35228 1153 aa14.88□□□□□ -0.03
CTSA-211ENST00000606066 HARS2P49590 506 aaKnown RBP14.88□□□□□ -0.03
CTSA-211ENST00000606066 RNASE9P60153 205 aaKnown RBP14.88□□□□□ -0.03
CTSA-211ENST00000606066 TBX2Q13207 712 aaPredicted RBP14.88□□□□□ -0.03
CTSA-211ENST00000606066 NNTQ13423 1086 aa14.88□□□□□ -0.03
CTSA-211ENST00000606066 TAF5Q15542 800 aa14.88□□□□□ -0.03
CTSA-211ENST00000606066 ITPRIPL2Q3MIP1 535 aa14.88□□□□□ -0.03
CTSA-211ENST00000606066 ARCQ7LC44 396 aa14.88□□□□□ -0.03
CTSA-211ENST00000606066 UNC45BQ8IWX7 931 aa14.88□□□□□ -0.03
CTSA-211ENST00000606066 DEFB106AQ8N104 65 aa14.88□□□□□ -0.03
CTSA-211ENST00000606066 CPA6Q8N4T0 437 aa14.88□□□□□ -0.03
CTSA-211ENST00000606066 DQX1Q8TE96 717 aaKnown RBP14.88□□□□□ -0.03
CTSA-211ENST00000606066 PIWIL1Q96J94 861 aaKnown RBP14.88□□□□□ -0.03
CTSA-211ENST00000606066 EBF3Q9H4W6 596 aa14.88□□□□□ -0.03
CTSA-211ENST00000606066 C8orf33Q9H7E9 229 aaPredicted RBP14.88□□□□□ -0.03
CTSA-211ENST00000606066 ABHD10Q9NUJ1 306 aa14.88□□□□□ -0.03
CTSA-211ENST00000606066 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.88□□□□□ -0.03
CTSA-211ENST00000606066 ADAMTS1Q9UHI8 967 aa14.88□□□□□ -0.03
CTSA-211ENST00000606066 CA14Q9ULX7 337 aa14.88□□□□□ -0.03
CTSA-211ENST00000606066 STAP1Q9ULZ2 295 aa14.88□□□□□ -0.03
CTSA-211ENST00000606066 DCHS1Q96JQ0 3298 aa14.88□□□□□ -0.03
CTSA-211ENST00000606066 EP300Q09472 2414 aaPredicted RBP14.88□□□□□ -0.03
CTSA-211ENST00000606066 ZNF292O60281 2723 aa14.88□□□□□ -0.03
CTSA-211ENST00000606066 FAM170AA1A519 330 aa14.87□□□□□ -0.03
CTSA-211ENST00000606066 TMCO5BA8MYB1 307 aa14.87□□□□□ -0.03
CTSA-211ENST00000606066 GOLGA8SH3BPF8 625 aa14.87□□□□□ -0.03
CTSA-211ENST00000606066 DDX3XO00571 662 aaKnown RBP eCLIP14.87□□□□□ -0.032e-7■■■■■ 33.6
CTSA-211ENST00000606066 MAN2B1O00754 1011 aa14.87□□□□□ -0.03
CTSA-211ENST00000606066 RTN2O75298 545 aa14.87□□□□□ -0.03
CTSA-211ENST00000606066 GRAP2O75791 330 aa14.87□□□□□ -0.03
CTSA-211ENST00000606066 MATKP42679 507 aa14.87□□□□□ -0.03
CTSA-211ENST00000606066 ADKP55263 362 aaKnown RBP14.87□□□□□ -0.03
CTSA-211ENST00000606066 GSCP56915 257 aaPredicted RBP14.87□□□□□ -0.03
CTSA-211ENST00000606066 TBX4P57082 545 aa14.87□□□□□ -0.03
CTSA-211ENST00000606066 RING1Q06587 406 aa14.87□□□□□ -0.03
CTSA-211ENST00000606066 PTP4A2Q12974 167 aa14.87□□□□□ -0.03
CTSA-211ENST00000606066 TRIP4Q15650 581 aaPredicted RBP14.87□□□□□ -0.03
CTSA-211ENST00000606066 MLF2Q15773 248 aaPredicted RBP14.87□□□□□ -0.03
CTSA-211ENST00000606066 EML3Q32P44 896 aa14.87□□□□□ -0.03
CTSA-211ENST00000606066 C2CD6Q53TS8 623 aa14.87□□□□□ -0.03
CTSA-211ENST00000606066 SYPL2Q5VXT5 272 aa14.87□□□□□ -0.03
CTSA-211ENST00000606066 NUGGCQ68CJ6 796 aa14.87□□□□□ -0.03
CTSA-211ENST00000606066 CWF19L1Q69YN2 538 aaKnown RBP14.87□□□□□ -0.03
CTSA-211ENST00000606066 TRIM68Q6AZZ1 485 aa14.87□□□□□ -0.03
CTSA-211ENST00000606066 MON1BQ7L1V2 547 aa14.87□□□□□ -0.03
CTSA-211ENST00000606066 ERMP1Q7Z2K6 904 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms