RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 C17orf80Q9BSJ5 609 aa18.71■□□□□ 0.59
VRK3-225ENST00000601912 PARD6BQ9BYG5 372 aa18.71■□□□□ 0.59
VRK3-225ENST00000601912 SMOC2Q9H3U7 446 aa18.71■□□□□ 0.59
VRK3-225ENST00000601912 LRRC19Q9H756 370 aa18.71■□□□□ 0.59
VRK3-225ENST00000601912 PCDH18Q9HCL0 1135 aa18.71■□□□□ 0.59
VRK3-225ENST00000601912 WDR6Q9NNW5 1121 aaKnown RBP18.71■□□□□ 0.59
VRK3-225ENST00000601912 OLA1Q9NTK5 396 aaKnown RBP18.71■□□□□ 0.59
VRK3-225ENST00000601912 AMACRQ9UHK6 382 aa18.71■□□□□ 0.59
VRK3-225ENST00000601912 FBXW11Q9UKB1 542 aa18.71■□□□□ 0.59
VRK3-225ENST00000601912 IRAK3Q9Y616 596 aa18.71■□□□□ 0.59
VRK3-225ENST00000601912 ZNF487B1APH4 448 aa18.7■□□□□ 0.58
VRK3-225ENST00000601912 LPXNO60711 386 aa18.7■□□□□ 0.58
VRK3-225ENST00000601912 L1CAMP32004 1257 aa18.7■□□□□ 0.58
VRK3-225ENST00000601912 ADRA1BP35368 520 aa18.7■□□□□ 0.58
VRK3-225ENST00000601912 FNTAP49354 379 aa18.7■□□□□ 0.58
VRK3-225ENST00000601912 CXCR3P49682 368 aa18.7■□□□□ 0.58
VRK3-225ENST00000601912 CCNG2Q16589 344 aa18.7■□□□□ 0.58
VRK3-225ENST00000601912 CCDC137Q6PK04 289 aaKnown RBP18.7■□□□□ 0.58
VRK3-225ENST00000601912 TTC13Q8NBP0 860 aa18.7■□□□□ 0.58
VRK3-225ENST00000601912 PDZD8Q8NEN9 1154 aa18.7■□□□□ 0.58
VRK3-225ENST00000601912 SPPL3Q8TCT6 385 aa18.7■□□□□ 0.58
VRK3-225ENST00000601912 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.7■□□□□ 0.58
VRK3-225ENST00000601912 POF1BQ8WVV4 589 aa18.7■□□□□ 0.58
VRK3-225ENST00000601912 C1orf54Q8WWF1 131 aa18.7■□□□□ 0.58
VRK3-225ENST00000601912 OVCA2Q8WZ82 227 aa18.7■□□□□ 0.58
VRK3-225ENST00000601912 RUBCNQ92622 972 aa18.7■□□□□ 0.58
VRK3-225ENST00000601912 SAMD11Q96NU1 681 aa18.7■□□□□ 0.58
VRK3-225ENST00000601912 ZNF670Q9BS34 389 aa18.7■□□□□ 0.58
VRK3-225ENST00000601912 TLR9Q9NR96 1032 aa18.7■□□□□ 0.58
VRK3-225ENST00000601912 MYO16Q9Y6X6 1858 aa18.7■□□□□ 0.58
VRK3-225ENST00000601912 PLXNA3P51805 1871 aa18.7■□□□□ 0.58
VRK3-225ENST00000601912 GRXCR1A8MXD5 290 aa18.69■□□□□ 0.58
VRK3-225ENST00000601912 RAD51CO43502 376 aa18.69■□□□□ 0.58
VRK3-225ENST00000601912 CST8O60676 142 aa18.69■□□□□ 0.58
VRK3-225ENST00000601912 IGLV3-25P01717 112 aa18.69■□□□□ 0.58
VRK3-225ENST00000601912 MYOGP15173 224 aa18.69■□□□□ 0.58
VRK3-225ENST00000601912 COILP38432 576 aaPredicted RBP18.69■□□□□ 0.58
VRK3-225ENST00000601912 ARL4AP40617 200 aa18.69■□□□□ 0.58
VRK3-225ENST00000601912 PGFP49763 221 aa18.69■□□□□ 0.58
VRK3-225ENST00000601912 EPHB3P54753 998 aa18.69■□□□□ 0.58
VRK3-225ENST00000601912 PLD1Q13393 1074 aa18.69■□□□□ 0.58
VRK3-225ENST00000601912 DHX34Q14147 1143 aaKnown RBP18.69■□□□□ 0.58
VRK3-225ENST00000601912 CA9Q16790 459 aa18.69■□□□□ 0.58
VRK3-225ENST00000601912 MSANTD2Q6P1R3 559 aa18.69■□□□□ 0.58
VRK3-225ENST00000601912 BBS12Q6ZW61 710 aa18.69■□□□□ 0.58
VRK3-225ENST00000601912 CCDC105Q8IYK2 499 aa18.69■□□□□ 0.58
VRK3-225ENST00000601912 MRPL43Q8N983 215 aaKnown RBP18.69■□□□□ 0.58
VRK3-225ENST00000601912 SERPINB11Q96P15 392 aa18.69■□□□□ 0.58
VRK3-225ENST00000601912 KLHL5Q96PQ7 755 aa18.69■□□□□ 0.58
VRK3-225ENST00000601912 RNF157Q96PX1 679 aa18.69■□□□□ 0.58
VRK3-225ENST00000601912 DCLK3Q9C098 648 aa18.69■□□□□ 0.58
VRK3-225ENST00000601912 UBE2OQ9C0C9 1292 aaKnown RBP18.69■□□□□ 0.58
VRK3-225ENST00000601912 OSER1Q9NX31 292 aa18.69■□□□□ 0.58
VRK3-225ENST00000601912 STIM2Q9P246 746 aa18.69■□□□□ 0.58
VRK3-225ENST00000601912 PCYOX1Q9UHG3 505 aa18.69■□□□□ 0.58
VRK3-225ENST00000601912 FEZ2Q9UHY8 353 aaPredicted RBP18.69■□□□□ 0.58
VRK3-225ENST00000601912 PCDHA11Q9Y5I1 949 aa18.69■□□□□ 0.58
VRK3-225ENST00000601912 COL4A4P53420 1690 aaPredicted RBP18.69■□□□□ 0.58
VRK3-225ENST00000601912 IRAK2O43187 625 aa18.69■□□□□ 0.58
VRK3-225ENST00000601912 CA3P07451 260 aa18.69■□□□□ 0.58
VRK3-225ENST00000601912 RARGP13631 454 aa18.69■□□□□ 0.58
VRK3-225ENST00000601912 KLRC2P26717 231 aa18.69■□□□□ 0.58
VRK3-225ENST00000601912 ERVFC1P60507 584 aa18.69■□□□□ 0.58
VRK3-225ENST00000601912 MRPS25P82663 173 aaKnown RBP18.69■□□□□ 0.58
VRK3-225ENST00000601912 SLC7A5Q01650 507 aa18.69■□□□□ 0.58
VRK3-225ENST00000601912 DR1Q01658 176 aa18.69■□□□□ 0.58
VRK3-225ENST00000601912 ADCY2Q08462 1091 aa18.69■□□□□ 0.58
VRK3-225ENST00000601912 SCAPQ12770 1279 aa18.69■□□□□ 0.58
VRK3-225ENST00000601912 TWF1Q12792 350 aa18.69■□□□□ 0.58
VRK3-225ENST00000601912 MMRN1Q13201 1228 aa18.69■□□□□ 0.58
VRK3-225ENST00000601912 ANKRD20A8PQ5CZ79 823 aa18.69■□□□□ 0.58
VRK3-225ENST00000601912 MICAL1Q8TDZ2 1067 aa18.69■□□□□ 0.58
VRK3-225ENST00000601912 CASP10Q92851 521 aa18.69■□□□□ 0.58
VRK3-225ENST00000601912 MYRFLQ96LU7 910 aa18.69■□□□□ 0.58
VRK3-225ENST00000601912 ZNF512Q96ME7 567 aaPredicted RBP18.69■□□□□ 0.58
VRK3-225ENST00000601912 TGS1Q96RS0 853 aaKnown RBP18.69■□□□□ 0.58
VRK3-225ENST00000601912 CDK5RAP1Q96SZ6 601 aaKnown RBP18.69■□□□□ 0.58
VRK3-225ENST00000601912 FRMD8P1Q9BZ68 369 aaPredicted RBP18.69■□□□□ 0.58
VRK3-225ENST00000601912 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.69■□□□□ 0.58
VRK3-225ENST00000601912 ARGLU1Q9NWB6 273 aaPredicted RBP18.69■□□□□ 0.58
VRK3-225ENST00000601912 RCOR3Q9P2K3 495 aaPredicted RBP18.69■□□□□ 0.58
VRK3-225ENST00000601912 SFMBT1Q9UHJ3 866 aa18.69■□□□□ 0.58
VRK3-225ENST00000601912 INSL5Q9Y5Q6 135 aa18.69■□□□□ 0.58
VRK3-225ENST00000601912 PLXNA4Q9HCM2 1894 aa18.69■□□□□ 0.58
VRK3-225ENST00000601912 TGM5O43548 720 aa18.68■□□□□ 0.58
VRK3-225ENST00000601912 ZDHHC11BP0C7U3 371 aa18.68■□□□□ 0.58
VRK3-225ENST00000601912 CCR1P32246 355 aa18.68■□□□□ 0.58
VRK3-225ENST00000601912 DYNLT1P63172 113 aa18.68■□□□□ 0.58
VRK3-225ENST00000601912 BRMS1LQ5PSV4 323 aa18.68■□□□□ 0.58
VRK3-225ENST00000601912 PLPP4Q5VZY2 271 aa18.68■□□□□ 0.58
VRK3-225ENST00000601912 FAM109BQ6ICB4 259 aaPredicted RBP18.68■□□□□ 0.58
VRK3-225ENST00000601912 CCDC149Q6ZUS6 474 aa18.68■□□□□ 0.58
VRK3-225ENST00000601912 TADA2BQ86TJ2 420 aa18.68■□□□□ 0.58
VRK3-225ENST00000601912 ITIH5Q86UX2 942 aa18.68■□□□□ 0.58
VRK3-225ENST00000601912 GRK7Q8WTQ7 553 aa18.68■□□□□ 0.58
VRK3-225ENST00000601912 HDAC7Q8WUI4 952 aa18.68■□□□□ 0.58
VRK3-225ENST00000601912 KCTD15Q96SI1 283 aaPredicted RBP18.68■□□□□ 0.58
VRK3-225ENST00000601912 PNKPQ96T60 521 aa18.68■□□□□ 0.58
VRK3-225ENST00000601912 TKTL2Q9H0I9 626 aa18.68■□□□□ 0.58
VRK3-225ENST00000601912 RASAL2Q9UJF2 1139 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms