RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 SYNPOQ8N3V7 929 aa16.46■□□□□ 0.23
RPS28-203ENST00000600659 OLIG1Q8TAK6 271 aa16.46■□□□□ 0.23
RPS28-203ENST00000600659 OLA1Q9NTK5 396 aaKnown RBP16.46■□□□□ 0.23
RPS28-203ENST00000600659 DAAM1Q9Y4D1 1078 aa16.46■□□□□ 0.23
RPS28-203ENST00000600659 A0A1B0GTH6 734 aa16.45■□□□□ 0.22
RPS28-203ENST00000600659 K7EQS6 105 aa16.45■□□□□ 0.22
RPS28-203ENST00000600659 TRIM24O15164 1050 aa16.45■□□□□ 0.22
RPS28-203ENST00000600659 PAPSS2O95340 614 aaPredicted RBP16.45■□□□□ 0.22
RPS28-203ENST00000600659 ADH1CP00326 375 aa16.45■□□□□ 0.22
RPS28-203ENST00000600659 ERBB2P04626 1255 aa16.45■□□□□ 0.22
RPS28-203ENST00000600659 CHRNB2P17787 502 aa16.45■□□□□ 0.22
RPS28-203ENST00000600659 CDK11BP21127 795 aaKnown RBP16.45■□□□□ 0.22
RPS28-203ENST00000600659 DRD1P21728 446 aa16.45■□□□□ 0.22
RPS28-203ENST00000600659 SOX5P35711 763 aa16.45■□□□□ 0.22
RPS28-203ENST00000600659 EIF2DP41214 584 aaKnown RBP16.45■□□□□ 0.22
RPS28-203ENST00000600659 BPIFB4P59827 614 aa16.45■□□□□ 0.22
RPS28-203ENST00000600659 PITX1P78337 314 aaPredicted RBP16.45■□□□□ 0.22
RPS28-203ENST00000600659 AMPD2Q01433 879 aa16.45■□□□□ 0.22
RPS28-203ENST00000600659 GOLGA8FQ08AF8 430 aa16.45■□□□□ 0.22
RPS28-203ENST00000600659 GOLGA8DPQ0D2H9 430 aa16.45■□□□□ 0.22
RPS28-203ENST00000600659 GRSF1Q12849 480 aaKnown RBP eCLIP16.45■□□□□ 0.22
RPS28-203ENST00000600659 EIF4EBP2Q13542 120 aaPredicted RBP16.45■□□□□ 0.22
RPS28-203ENST00000600659 TAF3Q5VWG9 929 aa16.45■□□□□ 0.22
RPS28-203ENST00000600659 SYPL2Q5VXT5 272 aa16.45■□□□□ 0.22
RPS28-203ENST00000600659 TSSK4Q6SA08 328 aa16.45■□□□□ 0.22
RPS28-203ENST00000600659 BEND5Q7L4P6 421 aa16.45■□□□□ 0.22
RPS28-203ENST00000600659 LUZP1Q86V48 1076 aa16.45■□□□□ 0.22
RPS28-203ENST00000600659 SPEM1Q8N4L4 309 aa16.45■□□□□ 0.22
RPS28-203ENST00000600659 ANKRD20A12PQ8NF67 263 aa16.45■□□□□ 0.22
RPS28-203ENST00000600659 DQX1Q8TE96 717 aaKnown RBP16.45■□□□□ 0.22
RPS28-203ENST00000600659 SLC20A1Q8WUM9 679 aa16.45■□□□□ 0.22
RPS28-203ENST00000600659 PLD4Q96BZ4 506 aa16.45■□□□□ 0.22
RPS28-203ENST00000600659 NAP1L5Q96NT1 182 aaPredicted RBP16.45■□□□□ 0.22
RPS28-203ENST00000600659 POLR3BQ9NW08 1133 aaPredicted RBP16.45■□□□□ 0.22
RPS28-203ENST00000600659 LSM7Q9UK45 103 aaKnown RBP16.45■□□□□ 0.22
RPS28-203ENST00000600659 FBXO4Q9UKT5 387 aa16.45■□□□□ 0.22
RPS28-203ENST00000600659 AGO1Q9UL18 857 aaKnown RBP16.45■□□□□ 0.22
RPS28-203ENST00000600659 STRIP2Q9ULQ0 834 aa16.45■□□□□ 0.22
RPS28-203ENST00000600659 HBS1LQ9Y450 684 aaKnown RBP16.45■□□□□ 0.22
RPS28-203ENST00000600659 K7ESF4 209 aa16.45■□□□□ 0.22
RPS28-203ENST00000600659 SART1O43290 800 aaKnown RBP16.45■□□□□ 0.22
RPS28-203ENST00000600659 LAMTOR5O43504 91 aa16.45■□□□□ 0.22
RPS28-203ENST00000600659 RNF40O75150 1001 aa16.45■□□□□ 0.22
RPS28-203ENST00000600659 GFPT2O94808 682 aa16.45■□□□□ 0.22
RPS28-203ENST00000600659 IGLV3-25P01717 112 aa16.45■□□□□ 0.22
RPS28-203ENST00000600659 MMEP08473 750 aa16.45■□□□□ 0.22
RPS28-203ENST00000600659 NBL1P41271 181 aa16.45■□□□□ 0.22
RPS28-203ENST00000600659 NOMO3P69849 1222 aa16.45■□□□□ 0.22
RPS28-203ENST00000600659 FMO1Q01740 532 aa16.45■□□□□ 0.22
RPS28-203ENST00000600659 GAD2Q05329 585 aa16.45■□□□□ 0.22
RPS28-203ENST00000600659 ZNF528Q3MIS6 628 aa16.45■□□□□ 0.22
RPS28-203ENST00000600659 OLFML1Q6UWY5 402 aa16.45■□□□□ 0.22
RPS28-203ENST00000600659 FAM183BPQ6ZVS7 135 aa16.45■□□□□ 0.22
RPS28-203ENST00000600659 TAC4Q86UU9 113 aa16.45■□□□□ 0.22
RPS28-203ENST00000600659 RNF139Q8WU17 664 aa16.45■□□□□ 0.22
RPS28-203ENST00000600659 PPP1R13BQ96KQ4 1090 aa16.45■□□□□ 0.22
RPS28-203ENST00000600659 SLC2A13Q96QE2 648 aa16.45■□□□□ 0.22
RPS28-203ENST00000600659 STOML2Q9UJZ1 356 aa16.45■□□□□ 0.22
RPS28-203ENST00000600659 NAALADL1Q9UQQ1 740 aa16.45■□□□□ 0.22
RPS28-203ENST00000600659 A0A0A0MRY4 1105 aa16.44■□□□□ 0.22
RPS28-203ENST00000600659 CHURC1-FNTBB4DL54 471 aa16.44■□□□□ 0.22
RPS28-203ENST00000600659 CACNG3O60359 315 aa16.44■□□□□ 0.22
RPS28-203ENST00000600659 TULP3O75386 442 aa16.44■□□□□ 0.22
RPS28-203ENST00000600659 PENKP01210 267 aaPredicted RBP16.44■□□□□ 0.22
RPS28-203ENST00000600659 CYP1A1P04798 512 aaPredicted RBP16.44■□□□□ 0.22
RPS28-203ENST00000600659 KRT9P35527 623 aa16.44■□□□□ 0.22
RPS28-203ENST00000600659 GABRB2P47870 512 aa16.44■□□□□ 0.22
RPS28-203ENST00000600659 SKOR2Q2VWA4 1001 aaPredicted RBP16.44■□□□□ 0.22
RPS28-203ENST00000600659 FYB2Q5VWT5 728 aa16.44■□□□□ 0.22
RPS28-203ENST00000600659 TPGS1Q6ZTW0 290 aa16.44■□□□□ 0.22
RPS28-203ENST00000600659 DENND1CQ8IV53 801 aa16.44■□□□□ 0.22
RPS28-203ENST00000600659 CPXM2Q8N436 756 aa16.44■□□□□ 0.22
RPS28-203ENST00000600659 BAP1Q92560 729 aa16.44■□□□□ 0.22
RPS28-203ENST00000600659 ATOH1Q92858 354 aaPredicted RBP16.44■□□□□ 0.22
RPS28-203ENST00000600659 FAM149B1Q96BN6 582 aa16.44■□□□□ 0.22
RPS28-203ENST00000600659 FAM122AQ96E09 287 aa16.44■□□□□ 0.22
RPS28-203ENST00000600659 SLC39A13Q96H72 371 aa16.44■□□□□ 0.22
RPS28-203ENST00000600659 FCRL2Q96LA5 508 aaPredicted RBP16.44■□□□□ 0.22
RPS28-203ENST00000600659 ADAM33Q9BZ11 813 aa16.44■□□□□ 0.22
RPS28-203ENST00000600659 TTYH3Q9C0H2 523 aa16.44■□□□□ 0.22
RPS28-203ENST00000600659 HCN2Q9UL51 889 aa16.44■□□□□ 0.22
RPS28-203ENST00000600659 GPR179Q6PRD1 2367 aa16.43■□□□□ 0.22
RPS28-203ENST00000600659 PROB1E7EW31 1015 aa16.43■□□□□ 0.22
RPS28-203ENST00000600659 NEDD8-MDP1E9PL57 170 aa16.43■□□□□ 0.22
RPS28-203ENST00000600659 NCAM1P13591 858 aa16.43■□□□□ 0.22
RPS28-203ENST00000600659 TYRP14679 529 aa16.43■□□□□ 0.22
RPS28-203ENST00000600659 CCR3P51677 355 aa16.43■□□□□ 0.22
RPS28-203ENST00000600659 DMWDQ09019 674 aa16.43■□□□□ 0.22
RPS28-203ENST00000600659 NNTQ13423 1086 aa16.43■□□□□ 0.22
RPS28-203ENST00000600659 FBXO43Q4G163 708 aa16.43■□□□□ 0.22
RPS28-203ENST00000600659 OTUD1Q5VV17 481 aaPredicted RBP16.43■□□□□ 0.22
RPS28-203ENST00000600659 NAT16Q8N8M0 369 aa16.43■□□□□ 0.22
RPS28-203ENST00000600659 ZBTB44Q8NCP5 570 aa16.43■□□□□ 0.22
RPS28-203ENST00000600659 ZNF397Q8NF99 534 aaPredicted RBP16.43■□□□□ 0.22
RPS28-203ENST00000600659 NEK11Q8NG66 645 aa16.43■□□□□ 0.22
RPS28-203ENST00000600659 PNKPQ96T60 521 aa16.43■□□□□ 0.22
RPS28-203ENST00000600659 BBS2Q9BXC9 721 aa16.43■□□□□ 0.22
RPS28-203ENST00000600659 DCLK3Q9C098 648 aa16.43■□□□□ 0.22
RPS28-203ENST00000600659 IRF2BPLQ9H1B7 796 aa16.43■□□□□ 0.22
RPS28-203ENST00000600659 POPDC2Q9HBU9 364 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms