RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 ASB16Q96NS5 453 aa12.81□□□□□ -0.36
TGFB1-204ENST00000600196 TBCBQ99426 244 aa12.81□□□□□ -0.36
TGFB1-204ENST00000600196 DDX50Q9BQ39 737 aaKnown RBP12.81□□□□□ -0.36
TGFB1-204ENST00000600196 KLF16Q9BXK1 252 aaPredicted RBP12.81□□□□□ -0.36
TGFB1-204ENST00000600196 POMKQ9H5K3 350 aa12.81□□□□□ -0.36
TGFB1-204ENST00000600196 IGSF9Q9P2J2 1179 aa12.81□□□□□ -0.36
TGFB1-204ENST00000600196 THEGQ9P2T0 379 aa12.81□□□□□ -0.36
TGFB1-204ENST00000600196 MYO1AQ9UBC5 1043 aa12.81□□□□□ -0.36
TGFB1-204ENST00000600196 STOML2Q9UJZ1 356 aa12.81□□□□□ -0.36
TGFB1-204ENST00000600196 NAALADL1Q9UQQ1 740 aa12.81□□□□□ -0.36
TGFB1-204ENST00000600196 PPP2R2CQ9Y2T4 447 aa12.81□□□□□ -0.36
TGFB1-204ENST00000600196 NOTCH4Q99466 2003 aa12.81□□□□□ -0.36
TGFB1-204ENST00000600196 ANHXE9PGG2 379 aa12.8□□□□□ -0.36
TGFB1-204ENST00000600196 PIK3R2O00459 728 aa12.8□□□□□ -0.36
TGFB1-204ENST00000600196 IRAK2O43187 625 aa12.8□□□□□ -0.36
TGFB1-204ENST00000600196 PROSCO94903 275 aa12.8□□□□□ -0.36
TGFB1-204ENST00000600196 ABL1P00519 1130 aa12.8□□□□□ -0.36
TGFB1-204ENST00000600196 CKMP06732 381 aa12.8□□□□□ -0.36
TGFB1-204ENST00000600196 MBL2P11226 248 aaPredicted RBP12.8□□□□□ -0.36
TGFB1-204ENST00000600196 MSNP26038 577 aaKnown RBP12.8□□□□□ -0.36
TGFB1-204ENST00000600196 HTR7P34969 479 aa12.8□□□□□ -0.36
TGFB1-204ENST00000600196 RDXP35241 583 aaKnown RBP12.8□□□□□ -0.36
TGFB1-204ENST00000600196 FLT3P36888 993 aa12.8□□□□□ -0.36
TGFB1-204ENST00000600196 HARS2P49590 506 aaKnown RBP12.8□□□□□ -0.36
TGFB1-204ENST00000600196 CDR1P51861 262 aa12.8□□□□□ -0.36
TGFB1-204ENST00000600196 RPL7AP62424 266 aaKnown RBP12.8□□□□□ -0.36
TGFB1-204ENST00000600196 NTHL1P78549 312 aa12.8□□□□□ -0.36
TGFB1-204ENST00000600196 TAF5Q15542 800 aa12.8□□□□□ -0.36
TGFB1-204ENST00000600196 ARL13BQ3SXY8 428 aa12.8□□□□□ -0.36
TGFB1-204ENST00000600196 PTCRAQ6ISU1 281 aaPredicted RBP12.8□□□□□ -0.36
TGFB1-204ENST00000600196 C11orf63Q6NUN7 778 aa12.8□□□□□ -0.36
TGFB1-204ENST00000600196 ARID3BQ8IVW6 561 aaPredicted RBP12.8□□□□□ -0.36
TGFB1-204ENST00000600196 ITFG1Q8TB96 612 aa12.8□□□□□ -0.36
TGFB1-204ENST00000600196 TRIM44Q96DX7 344 aaPredicted RBP12.8□□□□□ -0.36
TGFB1-204ENST00000600196 TCEAL4Q96EI5 215 aa12.8□□□□□ -0.36
TGFB1-204ENST00000600196 PIWIL1Q96J94 861 aaKnown RBP12.8□□□□□ -0.36
TGFB1-204ENST00000600196 MCEEQ96PE7 176 aa12.8□□□□□ -0.36
TGFB1-204ENST00000600196 PACSIN1Q9BY11 444 aa12.8□□□□□ -0.36
TGFB1-204ENST00000600196 RNF38Q9H0F5 515 aa12.8□□□□□ -0.36
TGFB1-204ENST00000600196 KCNF1Q9H3M0 494 aa12.8□□□□□ -0.36
TGFB1-204ENST00000600196 CCSER2Q9H7U1 834 aa12.8□□□□□ -0.36
TGFB1-204ENST00000600196 ZFP14Q9HCL3 533 aa12.8□□□□□ -0.36
TGFB1-204ENST00000600196 THG1LQ9NWX6 298 aaKnown RBP12.8□□□□□ -0.36
TGFB1-204ENST00000600196 LSM7Q9UK45 103 aaKnown RBP12.8□□□□□ -0.36
TGFB1-204ENST00000600196 DENND4CQ5VZ89 1909 aa12.8□□□□□ -0.36
TGFB1-204ENST00000600196 C2orf78A6NCI8 922 aa12.79□□□□□ -0.36
TGFB1-204ENST00000600196 H3BQ06 376 aaPredicted RBP12.79□□□□□ -0.36
TGFB1-204ENST00000600196 M0QYT0 321 aa12.79□□□□□ -0.36
TGFB1-204ENST00000600196 TUBB4AP04350 444 aa12.79□□□□□ -0.36
TGFB1-204ENST00000600196 CEBPBP17676 345 aa12.79□□□□□ -0.36
TGFB1-204ENST00000600196 PSMA2P25787 234 aa12.79□□□□□ -0.36
TGFB1-204ENST00000600196 CHKAP35790 457 aa12.79□□□□□ -0.36
TGFB1-204ENST00000600196 SLC11A2P49281 568 aa12.79□□□□□ -0.36
TGFB1-204ENST00000600196 MLLT6P55198 1093 aaPredicted RBP12.79□□□□□ -0.36
TGFB1-204ENST00000600196 TBX4P57082 545 aa12.79□□□□□ -0.36
TGFB1-204ENST00000600196 RNASE9P60153 205 aaKnown RBP12.79□□□□□ -0.36
TGFB1-204ENST00000600196 NRG1Q02297 640 aaPredicted RBP12.79□□□□□ -0.36
TGFB1-204ENST00000600196 SCAPQ12770 1279 aa12.79□□□□□ -0.36
TGFB1-204ENST00000600196 HADHQ16836 314 aaKnown RBP12.79□□□□□ -0.36
TGFB1-204ENST00000600196 ARHGAP29Q52LW3 1261 aa12.79□□□□□ -0.36
TGFB1-204ENST00000600196 C2CD6Q53TS8 623 aa12.79□□□□□ -0.36
TGFB1-204ENST00000600196 POLNQ7Z5Q5 900 aa12.79□□□□□ -0.36
TGFB1-204ENST00000600196 VSIG1Q86XK7 387 aa12.79□□□□□ -0.36
TGFB1-204ENST00000600196 ARL14EPQ8N8R7 260 aaPredicted RBP12.79□□□□□ -0.36
TGFB1-204ENST00000600196 ATP6V0D2Q8N8Y2 350 aa12.79□□□□□ -0.36
TGFB1-204ENST00000600196 ACRBPQ8NEB7 543 aa12.79□□□□□ -0.36
TGFB1-204ENST00000600196 JOSD2Q8TAC2 188 aa12.79□□□□□ -0.36
TGFB1-204ENST00000600196 ZSCAN18Q8TBC5 510 aaPredicted RBP12.79□□□□□ -0.36
TGFB1-204ENST00000600196 TEKT4Q8WW24 435 aa12.79□□□□□ -0.36
TGFB1-204ENST00000600196 NDRG1Q92597 394 aaKnown RBP12.79□□□□□ -0.36
TGFB1-204ENST00000600196 EDEM1Q92611 657 aa12.79□□□□□ -0.36
TGFB1-204ENST00000600196 ARHGEF26Q96DR7 871 aa12.79□□□□□ -0.36
TGFB1-204ENST00000600196 ZFRQ96KR1 1074 aaKnown RBP12.79□□□□□ -0.36
TGFB1-204ENST00000600196 BTN2A3PQ96KV6 586 aa12.79□□□□□ -0.36
TGFB1-204ENST00000600196 HAPLN3Q96S86 360 aa12.79□□□□□ -0.36
TGFB1-204ENST00000600196 SLITRK6Q9H5Y7 841 aa12.79□□□□□ -0.36
TGFB1-204ENST00000600196 WDCPQ9H6R7 721 aa12.79□□□□□ -0.36
TGFB1-204ENST00000600196 PRDM16Q9HAZ2 1276 aa12.79□□□□□ -0.36
TGFB1-204ENST00000600196 TRPV5Q9NQA5 729 aa12.79□□□□□ -0.36
TGFB1-204ENST00000600196 ARHGEF38Q9NXL2 777 aa12.79□□□□□ -0.36
TGFB1-204ENST00000600196 DONSONQ9NYP3 566 aa12.79□□□□□ -0.36
TGFB1-204ENST00000600196 ANAPC7Q9UJX3 599 aa12.79□□□□□ -0.36
TGFB1-204ENST00000600196 KCNU1A8MYU2 1149 aa12.78□□□□□ -0.36
TGFB1-204ENST00000600196 APOEP02649 317 aa12.78□□□□□ -0.36
TGFB1-204ENST00000600196 GBP2P32456 591 aaPredicted RBP12.78□□□□□ -0.36
TGFB1-204ENST00000600196 NOP2P46087 812 aaKnown RBP12.78□□□□□ -0.36
TGFB1-204ENST00000600196 PGFP49763 221 aa12.78□□□□□ -0.36
TGFB1-204ENST00000600196 SULT1E1P49888 294 aa12.78□□□□□ -0.36
TGFB1-204ENST00000600196 CYP4F8P98187 520 aa12.78□□□□□ -0.36
TGFB1-204ENST00000600196 DEUP1Q05D60 604 aa12.78□□□□□ -0.36
TGFB1-204ENST00000600196 EFEMP1Q12805 493 aa12.78□□□□□ -0.36
TGFB1-204ENST00000600196 FAM78AQ5JUQ0 283 aa12.78□□□□□ -0.36
TGFB1-204ENST00000600196 GET4Q7L5D6 327 aaPredicted RBP12.78□□□□□ -0.36
TGFB1-204ENST00000600196 SLFN11Q7Z7L1 901 aa12.78□□□□□ -0.36
TGFB1-204ENST00000600196 TAC4Q86UU9 113 aa12.78□□□□□ -0.36
TGFB1-204ENST00000600196 MFSD6LQ8IWD5 586 aa12.78□□□□□ -0.36
TGFB1-204ENST00000600196 ADHFE1Q8IWW8 467 aa12.78□□□□□ -0.36
TGFB1-204ENST00000600196 FAM217AQ8IXS0 508 aa12.78□□□□□ -0.36
TGFB1-204ENST00000600196 CPXM2Q8N436 756 aa12.78□□□□□ -0.36
TGFB1-204ENST00000600196 ZNF557Q8N988 423 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms