RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 TADA2BQ86TJ2 420 aa14.35□□□□□ -0.11
VRK3-219ENST00000600137 JOSD2Q8TAC2 188 aa14.35□□□□□ -0.11
VRK3-219ENST00000600137 IPO4Q8TEX9 1081 aaKnown RBP14.35□□□□□ -0.11
VRK3-219ENST00000600137 RNF139Q8WU17 664 aa14.35□□□□□ -0.11
VRK3-219ENST00000600137 IRF7Q92985 503 aa14.35□□□□□ -0.11
VRK3-219ENST00000600137 NPY6RQ99463 290 aa14.35□□□□□ -0.11
VRK3-219ENST00000600137 DDX23Q9BUQ8 820 aaKnown RBP14.35□□□□□ -0.11
VRK3-219ENST00000600137 GTSE1Q9NYZ3 720 aa14.35□□□□□ -0.11
VRK3-219ENST00000600137 HBS1LQ9Y450 684 aaKnown RBP14.35□□□□□ -0.11
VRK3-219ENST00000600137 TMCO5BA8MYB1 307 aa14.34□□□□□ -0.11
VRK3-219ENST00000600137 AKR1B15C9JRZ8 316 aaPredicted RBP14.34□□□□□ -0.11
VRK3-219ENST00000600137 GOLGA8SH3BPF8 625 aa14.34□□□□□ -0.11
VRK3-219ENST00000600137 GFRA2O00451 464 aa14.34□□□□□ -0.11
VRK3-219ENST00000600137 RTN2O75298 545 aa14.34□□□□□ -0.11
VRK3-219ENST00000600137 DAB1O75553 588 aa14.34□□□□□ -0.11
VRK3-219ENST00000600137 FTLP02792 175 aaPredicted RBP14.34□□□□□ -0.11
VRK3-219ENST00000600137 CDC25BP30305 580 aa14.34□□□□□ -0.11
VRK3-219ENST00000600137 NOS2P35228 1153 aa14.34□□□□□ -0.11
VRK3-219ENST00000600137 NSFP46459 744 aaKnown RBP14.34□□□□□ -0.11
VRK3-219ENST00000600137 CDK17Q00537 523 aa14.34□□□□□ -0.11
VRK3-219ENST00000600137 RUNX3Q13761 415 aa14.34□□□□□ -0.11
VRK3-219ENST00000600137 SLC44A4Q53GD3 710 aa14.34□□□□□ -0.11
VRK3-219ENST00000600137 DCAF6Q58WW2 860 aa14.34□□□□□ -0.11
VRK3-219ENST00000600137 FAM102AQ5T9C2 384 aaPredicted RBP14.34□□□□□ -0.11
VRK3-219ENST00000600137 RHBDF2Q6PJF5 856 aa14.34□□□□□ -0.11
VRK3-219ENST00000600137 TOGARAM2Q6ZUX3 1019 aa14.34□□□□□ -0.11
VRK3-219ENST00000600137 RSRC2Q7L4I2 434 aaKnown RBP14.34□□□□□ -0.11
VRK3-219ENST00000600137 TAC4Q86UU9 113 aa14.34□□□□□ -0.11
VRK3-219ENST00000600137 DDX42Q86XP3 938 aaKnown RBP eCLIP14.34□□□□□ -0.11
VRK3-219ENST00000600137 BBS7Q8IWZ6 715 aa14.34□□□□□ -0.11
VRK3-219ENST00000600137 ADAM32Q8TC27 787 aa14.34□□□□□ -0.11
VRK3-219ENST00000600137 DNASE1L2Q92874 299 aa14.34□□□□□ -0.11
VRK3-219ENST00000600137 VCPIP1Q96JH7 1222 aa14.34□□□□□ -0.11
VRK3-219ENST00000600137 FCRL2Q96LA5 508 aaPredicted RBP14.34□□□□□ -0.11
VRK3-219ENST00000600137 EBF3Q9H4W6 596 aa14.34□□□□□ -0.11
VRK3-219ENST00000600137 SYNCQ9H7C4 482 aa14.34□□□□□ -0.11
VRK3-219ENST00000600137 HEBP1Q9NRV9 189 aa14.34□□□□□ -0.11
VRK3-219ENST00000600137 SEPT11Q9NVA2 429 aaKnown RBP14.34□□□□□ -0.11
VRK3-219ENST00000600137 THG1LQ9NWX6 298 aaKnown RBP14.34□□□□□ -0.11
VRK3-219ENST00000600137 DUS2Q9NX74 493 aaKnown RBP14.34□□□□□ -0.11
VRK3-219ENST00000600137 SSU72P8A0A1W2PR75 194 aa14.33□□□□□ -0.12
VRK3-219ENST00000600137 SIGLEC16A6NMB1 481 aa14.33□□□□□ -0.12
VRK3-219ENST00000600137 DLL1O00548 723 aa14.33□□□□□ -0.12
VRK3-219ENST00000600137 IRAK2O43187 625 aa14.33□□□□□ -0.12
VRK3-219ENST00000600137 ENDOD1O94919 500 aa14.33□□□□□ -0.12
VRK3-219ENST00000600137 TRUB2O95900 331 aaKnown RBP14.33□□□□□ -0.12
VRK3-219ENST00000600137 PDGFBP01127 241 aaPredicted RBP14.33□□□□□ -0.12
VRK3-219ENST00000600137 CALB1P05937 261 aa14.33□□□□□ -0.12
VRK3-219ENST00000600137 HMBSP08397 361 aa14.33□□□□□ -0.12
VRK3-219ENST00000600137 IRF1P10914 325 aa14.33□□□□□ -0.12
VRK3-219ENST00000600137 FECHP22830 423 aa14.33□□□□□ -0.12
VRK3-219ENST00000600137 RRM1P23921 792 aa14.33□□□□□ -0.12
VRK3-219ENST00000600137 MATKP42679 507 aa14.33□□□□□ -0.12
VRK3-219ENST00000600137 MLLT6P55198 1093 aaPredicted RBP14.33□□□□□ -0.12
VRK3-219ENST00000600137 RING1Q06587 406 aa14.33□□□□□ -0.12
VRK3-219ENST00000600137 NNTQ13423 1086 aa14.33□□□□□ -0.12
VRK3-219ENST00000600137 PDGFRLQ15198 375 aa14.33□□□□□ -0.12
VRK3-219ENST00000600137 RAB6CQ53S08 254 aa14.33□□□□□ -0.12
VRK3-219ENST00000600137 TDRD12Q587J7 1177 aaKnown RBP14.33□□□□□ -0.12
VRK3-219ENST00000600137 PLEKHA7Q6IQ23 1121 aa14.33□□□□□ -0.12
VRK3-219ENST00000600137 CNGA4Q8IV77 575 aa14.33□□□□□ -0.12
VRK3-219ENST00000600137 FAM217AQ8IXS0 508 aa14.33□□□□□ -0.12
VRK3-219ENST00000600137 YAF2Q8IY57 180 aa14.33□□□□□ -0.12
VRK3-219ENST00000600137 ZNF687Q8N1G0 1237 aa14.33□□□□□ -0.12
VRK3-219ENST00000600137 C3orf20Q8ND61 904 aa14.33□□□□□ -0.12
VRK3-219ENST00000600137 NACA2Q9H009 215 aa14.33□□□□□ -0.12
VRK3-219ENST00000600137 RAB6CQ9H0N0 254 aa14.33□□□□□ -0.12
VRK3-219ENST00000600137 ECT2Q9H8V3 914 aa14.33□□□□□ -0.12
VRK3-219ENST00000600137 WDR35Q9P2L0 1181 aa14.33□□□□□ -0.12
VRK3-219ENST00000600137 STOML2Q9UJZ1 356 aa14.33□□□□□ -0.12
VRK3-219ENST00000600137 AGO1Q9UL18 857 aaKnown RBP14.33□□□□□ -0.12
VRK3-219ENST00000600137 STRIP2Q9ULQ0 834 aa14.33□□□□□ -0.12
VRK3-219ENST00000600137 C2CD4BA6NLJ0 364 aa14.32□□□□□ -0.12
VRK3-219ENST00000600137 I6L893 689 aaPredicted RBP14.32□□□□□ -0.12
VRK3-219ENST00000600137 CAPN9O14815 690 aa14.32□□□□□ -0.12
VRK3-219ENST00000600137 RFC1P35251 1148 aaPredicted RBP14.32□□□□□ -0.12
VRK3-219ENST00000600137 SOX9P48436 509 aa14.32□□□□□ -0.12
VRK3-219ENST00000600137 STARD6P59095 220 aa14.32□□□□□ -0.12
VRK3-219ENST00000600137 RNASE9P60153 205 aaKnown RBP14.32□□□□□ -0.12
VRK3-219ENST00000600137 RPL7AP62424 266 aaKnown RBP14.32□□□□□ -0.12
VRK3-219ENST00000600137 PFKPQ01813 784 aa14.32□□□□□ -0.12
VRK3-219ENST00000600137 ARTNQ5T4W7 220 aa14.32□□□□□ -0.12
VRK3-219ENST00000600137 TXNDC11Q6PKC3 985 aa14.32□□□□□ -0.12
VRK3-219ENST00000600137 EMC1Q8N766 993 aa14.32□□□□□ -0.12
VRK3-219ENST00000600137 MSANTD4Q8NCY6 345 aa14.32□□□□□ -0.12
VRK3-219ENST00000600137 TTC16Q8NEE8 873 aa14.32□□□□□ -0.12
VRK3-219ENST00000600137 TTC8Q8TAM2 541 aa14.32□□□□□ -0.12
VRK3-219ENST00000600137 GOLGA1Q92805 767 aa14.32□□□□□ -0.12
VRK3-219ENST00000600137 PLD4Q96BZ4 506 aa14.32□□□□□ -0.12
VRK3-219ENST00000600137 OTUB2Q96DC9 234 aa14.32□□□□□ -0.12
VRK3-219ENST00000600137 PGAP3Q96FM1 320 aaPredicted RBP14.32□□□□□ -0.12
VRK3-219ENST00000600137 TRIM62Q9BVG3 475 aa14.32□□□□□ -0.12
VRK3-219ENST00000600137 METTL5Q9NRN9 209 aaKnown RBP14.32□□□□□ -0.12
VRK3-219ENST00000600137 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.32□□□□□ -0.12
VRK3-219ENST00000600137 TBC1D14Q9P2M4 693 aa14.32□□□□□ -0.12
VRK3-219ENST00000600137 CA14Q9ULX7 337 aa14.32□□□□□ -0.12
VRK3-219ENST00000600137 TLR6Q9Y2C9 796 aa14.32□□□□□ -0.12
VRK3-219ENST00000600137 SH3BP1Q9Y3L3 701 aa14.32□□□□□ -0.12
VRK3-219ENST00000600137 KCNU1A8MYU2 1149 aa14.31□□□□□ -0.12
VRK3-219ENST00000600137 CYP17A1P05093 508 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms