RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 BEND5Q7L4P6 421 aa19.71■□□□□ 0.75
CCDC9-205ENST00000600117 TMTC1Q8IUR5 882 aa19.71■□□□□ 0.75
CCDC9-205ENST00000600117 CMTM8Q8IZV2 173 aa19.71■□□□□ 0.75
CCDC9-205ENST00000600117 ARL14EPQ8N8R7 260 aaPredicted RBP19.71■□□□□ 0.75
CCDC9-205ENST00000600117 EDEM1Q92611 657 aa19.71■□□□□ 0.75
CCDC9-205ENST00000600117 FAM149B1Q96BN6 582 aa19.71■□□□□ 0.75
CCDC9-205ENST00000600117 CYP2S1Q96SQ9 504 aa19.71■□□□□ 0.75
CCDC9-205ENST00000600117 BAG1Q99933 345 aaPredicted RBP19.71■□□□□ 0.75
CCDC9-205ENST00000600117 TBC1D17Q9HA65 648 aa19.71■□□□□ 0.75
CCDC9-205ENST00000600117 ABCC13Q9NSE7 274 aa19.71■□□□□ 0.75
CCDC9-205ENST00000600117 WDR35Q9P2L0 1181 aa19.71■□□□□ 0.75
CCDC9-205ENST00000600117 NUDT5Q9UKK9 219 aa19.71■□□□□ 0.75
CCDC9-205ENST00000600117 STRIP2Q9ULQ0 834 aa19.71■□□□□ 0.75
CCDC9-205ENST00000600117 ZFP37Q9Y6Q3 630 aaPredicted RBP19.71■□□□□ 0.75
CCDC9-205ENST00000600117 TRAV19A0A0A6YYK7 116 aa19.7■□□□□ 0.74
CCDC9-205ENST00000600117 SOWAHDA6NJG2 315 aa19.7■□□□□ 0.74
CCDC9-205ENST00000600117 GOLGA8SH3BPF8 625 aa19.7■□□□□ 0.74
CCDC9-205ENST00000600117 SP9P0CG40 484 aa19.7■□□□□ 0.74
CCDC9-205ENST00000600117 RALAP11233 206 aa19.7■□□□□ 0.74
CCDC9-205ENST00000600117 RRM1P23921 792 aa19.7■□□□□ 0.74
CCDC9-205ENST00000600117 YWHAZP63104 245 aaKnown RBP19.7■□□□□ 0.74
CCDC9-205ENST00000600117 MTF1Q14872 753 aa19.7■□□□□ 0.74
CCDC9-205ENST00000600117 FAM78AQ5JUQ0 283 aa19.7■□□□□ 0.74
CCDC9-205ENST00000600117 FAM102AQ5T9C2 384 aaPredicted RBP19.7■□□□□ 0.74
CCDC9-205ENST00000600117 RAD9BQ6WBX8 426 aa19.7■□□□□ 0.74
CCDC9-205ENST00000600117 PHLDB2Q86SQ0 1253 aa19.7■□□□□ 0.74
CCDC9-205ENST00000600117 CCDC170Q8IYT3 715 aa19.7■□□□□ 0.74
CCDC9-205ENST00000600117 C3orf20Q8ND61 904 aa19.7■□□□□ 0.74
CCDC9-205ENST00000600117 ZSCAN18Q8TBC5 510 aaPredicted RBP19.7■□□□□ 0.74
CCDC9-205ENST00000600117 ANP32BQ92688 251 aaKnown RBP19.7■□□□□ 0.74
CCDC9-205ENST00000600117 NXPE3Q969Y0 559 aa19.7■□□□□ 0.74
CCDC9-205ENST00000600117 ASB16Q96NS5 453 aa19.7■□□□□ 0.74
CCDC9-205ENST00000600117 SLC2A13Q96QE2 648 aa19.7■□□□□ 0.74
CCDC9-205ENST00000600117 SLITRK6Q9H5Y7 841 aa19.7■□□□□ 0.74
CCDC9-205ENST00000600117 TRPV4Q9HBA0 871 aa19.7■□□□□ 0.74
CCDC9-205ENST00000600117 TMEM59LQ9UK28 342 aa19.7■□□□□ 0.74
CCDC9-205ENST00000600117 USP24Q9UPU5 2620 aa19.7■□□□□ 0.74
CCDC9-205ENST00000600117 HELZP42694 1942 aaKnown RBP19.69■□□□□ 0.74
CCDC9-205ENST00000600117 HSF2BPO75031 334 aa19.69■□□□□ 0.74
CCDC9-205ENST00000600117 DAB1O75553 588 aa19.69■□□□□ 0.74
CCDC9-205ENST00000600117 GRAP2O75791 330 aa19.69■□□□□ 0.74
CCDC9-205ENST00000600117 LCA5LO95447 670 aa19.69■□□□□ 0.74
CCDC9-205ENST00000600117 GJB6O95452 261 aa19.69■□□□□ 0.74
CCDC9-205ENST00000600117 PRAMEF12O95522 483 aa19.69■□□□□ 0.74
CCDC9-205ENST00000600117 SRFP11831 508 aa19.69■□□□□ 0.74
CCDC9-205ENST00000600117 HDCP19113 662 aa19.69■□□□□ 0.74
CCDC9-205ENST00000600117 FCARP24071 287 aa19.69■□□□□ 0.74
CCDC9-205ENST00000600117 SLC7A9P82251 487 aa19.69■□□□□ 0.74
CCDC9-205ENST00000600117 TRNP1Q6NT89 227 aa19.69■□□□□ 0.74
CCDC9-205ENST00000600117 MSANTD2Q6P1R3 559 aa19.69■□□□□ 0.74
CCDC9-205ENST00000600117 KLHDC10Q6PID8 442 aa19.69■□□□□ 0.74
CCDC9-205ENST00000600117 DCLK2Q8N568 766 aa19.69■□□□□ 0.74
CCDC9-205ENST00000600117 RSAD2Q8WXG1 361 aa19.69■□□□□ 0.74
CCDC9-205ENST00000600117 SMG9Q9H0W8 520 aaKnown RBP19.69■□□□□ 0.74
CCDC9-205ENST00000600117 POPDC2Q9HBU9 364 aa19.69■□□□□ 0.74
CCDC9-205ENST00000600117 DLGAP2Q9P1A6 1054 aa19.69■□□□□ 0.74
CCDC9-205ENST00000600117 CA14Q9ULX7 337 aa19.69■□□□□ 0.74
CCDC9-205ENST00000600117 NAALADL1Q9UQQ1 740 aa19.69■□□□□ 0.74
CCDC9-205ENST00000600117 MDM4O15151 490 aa19.68■□□□□ 0.74
CCDC9-205ENST00000600117 ATMINO43313 823 aaPredicted RBP19.68■□□□□ 0.74
CCDC9-205ENST00000600117 ATP5C1P36542 298 aaKnown RBP19.68■□□□□ 0.74
CCDC9-205ENST00000600117 GALCP54803 685 aa19.68■□□□□ 0.74
CCDC9-205ENST00000600117 ZXDBP98169 803 aa19.68■□□□□ 0.74
CCDC9-205ENST00000600117 RSPO4Q2I0M5 234 aaPredicted RBP19.68■□□□□ 0.74
CCDC9-205ENST00000600117 C10orf120Q5SQS8 335 aa19.68■□□□□ 0.74
CCDC9-205ENST00000600117 PPP1R15BQ5SWA1 713 aa19.68■□□□□ 0.74
CCDC9-205ENST00000600117 SYPL2Q5VXT5 272 aa19.68■□□□□ 0.74
CCDC9-205ENST00000600117 PLEKHA7Q6IQ23 1121 aa19.68■□□□□ 0.74
CCDC9-205ENST00000600117 ARCQ7LC44 396 aa19.68■□□□□ 0.74
CCDC9-205ENST00000600117 ARID3BQ8IVW6 561 aaPredicted RBP19.68■□□□□ 0.74
CCDC9-205ENST00000600117 C1orf210Q8IVY1 113 aa19.68■□□□□ 0.74
CCDC9-205ENST00000600117 DEFB106AQ8N104 65 aa19.68■□□□□ 0.74
CCDC9-205ENST00000600117 SLC44A3Q8N4M1 653 aa19.68■□□□□ 0.74
CCDC9-205ENST00000600117 JOSD2Q8TAC2 188 aa19.68■□□□□ 0.74
CCDC9-205ENST00000600117 GOLGA1Q92805 767 aa19.68■□□□□ 0.74
CCDC9-205ENST00000600117 SMARCD2Q92925 531 aa19.68■□□□□ 0.74
CCDC9-205ENST00000600117 USP13Q92995 863 aaPredicted RBP19.68■□□□□ 0.74
CCDC9-205ENST00000600117 ZNF653Q96CK0 615 aa19.68■□□□□ 0.74
CCDC9-205ENST00000600117 RSPRY1Q96DX4 576 aa19.68■□□□□ 0.74
CCDC9-205ENST00000600117 TRIM11Q96F44 468 aa19.68■□□□□ 0.74
CCDC9-205ENST00000600117 ZFRQ96KR1 1074 aaKnown RBP19.68■□□□□ 0.74
CCDC9-205ENST00000600117 CDK5RAP1Q96SZ6 601 aaKnown RBP19.68■□□□□ 0.74
CCDC9-205ENST00000600117 TRIM62Q9BVG3 475 aa19.68■□□□□ 0.74
CCDC9-205ENST00000600117 PACSIN1Q9BY11 444 aa19.68■□□□□ 0.74
CCDC9-205ENST00000600117 METTL5Q9NRN9 209 aaKnown RBP19.68■□□□□ 0.74
CCDC9-205ENST00000600117 OLA1Q9NTK5 396 aaKnown RBP19.68■□□□□ 0.74
CCDC9-205ENST00000600117 ARHGAP26Q9UNA1 814 aa19.68■□□□□ 0.74
CCDC9-205ENST00000600117 SIT1Q9Y3P8 196 aa19.68■□□□□ 0.74
CCDC9-205ENST00000600117 SIGLEC16A6NMB1 481 aa19.67■□□□□ 0.74
CCDC9-205ENST00000600117 EIF3CLB5ME19 914 aaKnown RBP19.67■□□□□ 0.74
CCDC9-205ENST00000600117 ANHXE9PGG2 379 aa19.67■□□□□ 0.74
CCDC9-205ENST00000600117 CKMP06732 381 aa19.67■□□□□ 0.74
CCDC9-205ENST00000600117 DCNP07585 359 aaKnown RBP19.67■□□□□ 0.74
CCDC9-205ENST00000600117 MYBL1P10243 752 aa19.67■□□□□ 0.74
CCDC9-205ENST00000600117 MBL2P11226 248 aaPredicted RBP19.67■□□□□ 0.74
CCDC9-205ENST00000600117 NCAM1P13591 858 aa19.67■□□□□ 0.74
CCDC9-205ENST00000600117 ABCB4P21439 1286 aa19.67■□□□□ 0.74
CCDC9-205ENST00000600117 CYLC1P35663 651 aaPredicted RBP19.67■□□□□ 0.74
CCDC9-205ENST00000600117 FLT3P36888 993 aa19.67■□□□□ 0.74
CCDC9-205ENST00000600117 AVPR1AP37288 418 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms