RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 RNF40O75150 1001 aa29.44■■■□□ 2.3
SSBP4-206ENST00000599699 CXCL12P48061 93 aa29.44■■■□□ 2.3
SSBP4-206ENST00000599699 HARS2P49590 506 aaKnown RBP29.44■■■□□ 2.3
SSBP4-206ENST00000599699 SNX16P57768 344 aa29.44■■■□□ 2.3
SSBP4-206ENST00000599699 TPM4P67936 248 aa29.44■■■□□ 2.3
SSBP4-206ENST00000599699 IQCB1Q15051 598 aa29.44■■■□□ 2.3
SSBP4-206ENST00000599699 FBXO43Q4G163 708 aa29.44■■■□□ 2.3
SSBP4-206ENST00000599699 FILIP1LQ4L180 1135 aa29.44■■■□□ 2.3
SSBP4-206ENST00000599699 TSSK4Q6SA08 328 aa29.44■■■□□ 2.3
SSBP4-206ENST00000599699 C12orf40Q86WS4 652 aa29.44■■■□□ 2.3
SSBP4-206ENST00000599699 CPXM1Q96SM3 734 aa29.44■■■□□ 2.3
SSBP4-206ENST00000599699 TRIM62Q9BVG3 475 aa29.44■■■□□ 2.3
SSBP4-206ENST00000599699 BBS2Q9BXC9 721 aa29.44■■■□□ 2.3
SSBP4-206ENST00000599699 WDR35Q9P2L0 1181 aa29.44■■■□□ 2.3
SSBP4-206ENST00000599699 TJP2Q9UDY2 1190 aa29.44■■■□□ 2.3
SSBP4-206ENST00000599699 AGO1Q9UL18 857 aaKnown RBP29.44■■■□□ 2.3
SSBP4-206ENST00000599699 CACNA1IQ9P0X4 2223 aa29.43■■■□□ 2.3
SSBP4-206ENST00000599699 PALM2-AKAP2B1ALY0 433 aaPredicted RBP29.43■■■□□ 2.3
SSBP4-206ENST00000599699 NEDD8-MDP1E9PL57 170 aa29.43■■■□□ 2.3
SSBP4-206ENST00000599699 EIF2DP41214 584 aaKnown RBP29.43■■■□□ 2.3
SSBP4-206ENST00000599699 SATB1Q01826 763 aa29.43■■■□□ 2.3
SSBP4-206ENST00000599699 KDSRQ06136 332 aa29.43■■■□□ 2.3
SSBP4-206ENST00000599699 MSANTD2Q6P1R3 559 aa29.43■■■□□ 2.3
SSBP4-206ENST00000599699 MAMSTRQ6ZN01 415 aa29.43■■■□□ 2.3
SSBP4-206ENST00000599699 TMEM35BQ8NCS4 154 aa29.43■■■□□ 2.3
SSBP4-206ENST00000599699 PHOX2BQ99453 314 aa29.43■■■□□ 2.3
SSBP4-206ENST00000599699 CBX8Q9HC52 389 aa29.43■■■□□ 2.3
SSBP4-206ENST00000599699 PRMT8Q9NR22 394 aaPredicted RBP29.43■■■□□ 2.3
SSBP4-206ENST00000599699 ATG13O75143 517 aa29.42■■■□□ 2.3
SSBP4-206ENST00000599699 APODP05090 189 aa29.42■■■□□ 2.3
SSBP4-206ENST00000599699 SOX5P35711 763 aa29.42■■■□□ 2.3
SSBP4-206ENST00000599699 CHKAP35790 457 aa29.42■■■□□ 2.3
SSBP4-206ENST00000599699 STAT1P42224 750 aa29.42■■■□□ 2.3
SSBP4-206ENST00000599699 TRIP4Q15650 581 aaPredicted RBP29.42■■■□□ 2.3
SSBP4-206ENST00000599699 NOP9Q86U38 636 aaKnown RBP29.42■■■□□ 2.3
SSBP4-206ENST00000599699 IPO4Q8TEX9 1081 aaKnown RBP29.42■■■□□ 2.3
SSBP4-206ENST00000599699 BHMTQ93088 406 aa29.42■■■□□ 2.3
SSBP4-206ENST00000599699 ARHGEF4Q9NR80 690 aa29.42■■■□□ 2.3
SSBP4-206ENST00000599699 NAALADL1Q9UQQ1 740 aa29.42■■■□□ 2.3
SSBP4-206ENST00000599699 TYRP14679 529 aa29.41■■■□□ 2.3
SSBP4-206ENST00000599699 SEC13P55735 322 aa29.41■■■□□ 2.3
SSBP4-206ENST00000599699 JAM2P57087 298 aa29.41■■■□□ 2.3
SSBP4-206ENST00000599699 ZNF528Q3MIS6 628 aa29.41■■■□□ 2.3
SSBP4-206ENST00000599699 OR6B2Q6IFH4 312 aa29.41■■■□□ 2.3
SSBP4-206ENST00000599699 LUZP1Q86V48 1076 aa29.41■■■□□ 2.3
SSBP4-206ENST00000599699 CCDC26Q8TAB7 109 aa29.41■■■□□ 2.3
SSBP4-206ENST00000599699 EZH1Q92800 747 aaPredicted RBP29.41■■■□□ 2.3
SSBP4-206ENST00000599699 XPO6Q96QU8 1125 aaKnown RBP29.41■■■□□ 2.3
SSBP4-206ENST00000599699 RTN4Q9NQC3 1192 aaKnown RBP29.41■■■□□ 2.3
SSBP4-206ENST00000599699 DEC1Q9P2X7 70 aa29.41■■■□□ 2.3
SSBP4-206ENST00000599699 TEX33O43247 280 aa29.4■■■□□ 2.3
SSBP4-206ENST00000599699 KAT7O95251 611 aa29.4■■■□□ 2.3
SSBP4-206ENST00000599699 SERPINC1P01008 464 aa29.4■■■□□ 2.3
SSBP4-206ENST00000599699 FYNP06241 537 aa29.4■■■□□ 2.3
SSBP4-206ENST00000599699 YWHAZP63104 245 aaKnown RBP29.4■■■□□ 2.3
SSBP4-206ENST00000599699 PREPLQ4J6C6 727 aaPredicted RBP29.4■■■□□ 2.3
SSBP4-206ENST00000599699 PKN3Q6P5Z2 889 aa29.4■■■□□ 2.3
SSBP4-206ENST00000599699 CACNA2D4Q7Z3S7 1137 aa29.4■■■□□ 2.3
SSBP4-206ENST00000599699 RPLP0P6Q8NHW5 317 aa29.4■■■□□ 2.3
SSBP4-206ENST00000599699 EPS8L1Q8TE68 723 aa29.4■■■□□ 2.3
SSBP4-206ENST00000599699 DQX1Q8TE96 717 aaKnown RBP29.4■■■□□ 2.3
SSBP4-206ENST00000599699 POPDC2Q9HBU9 364 aa29.4■■■□□ 2.3
SSBP4-206ENST00000599699 DNAJC17Q9NVM6 304 aaKnown RBP29.4■■■□□ 2.3
SSBP4-206ENST00000599699 R4GN57 208 aa29.4■■■□□ 2.3
SSBP4-206ENST00000599699 FAM170AA1A519 330 aa29.39■■■□□ 2.3
SSBP4-206ENST00000599699 TULP3O75386 442 aa29.39■■■□□ 2.3
SSBP4-206ENST00000599699 CAVIN2O95810 425 aa29.39■■■□□ 2.3
SSBP4-206ENST00000599699 ERBB2P04626 1255 aa29.39■■■□□ 2.3
SSBP4-206ENST00000599699 GRIA2P42262 883 aa29.39■■■□□ 2.3
SSBP4-206ENST00000599699 TBX4P57082 545 aa29.39■■■□□ 2.3
SSBP4-206ENST00000599699 PTPN20Q4JDL3 420 aa29.39■■■□□ 2.3
SSBP4-206ENST00000599699 EFHC1Q5JVL4 640 aa29.39■■■□□ 2.3
SSBP4-206ENST00000599699 ZC3H14Q6PJT7 736 aaKnown RBP29.39■■■□□ 2.3
SSBP4-206ENST00000599699 ETFBKMTQ8IXQ9 262 aa29.39■■■□□ 2.3
SSBP4-206ENST00000599699 ADAM32Q8TC27 787 aa29.39■■■□□ 2.3
SSBP4-206ENST00000599699 DDX1Q92499 740 aaKnown RBP29.39■■■□□ 2.3
SSBP4-206ENST00000599699 PLK2Q9NYY3 685 aa29.39■■■□□ 2.3
SSBP4-206ENST00000599699 MARK1Q9P0L2 795 aa29.39■■■□□ 2.3
SSBP4-206ENST00000599699 MYOFQ9NZM1 2061 aa29.38■■■□□ 2.29
SSBP4-206ENST00000599699 TBC1D3BA6NDS4 549 aa29.38■■■□□ 2.29
SSBP4-206ENST00000599699 GOLGA6L19H0YKK7 550 aa29.38■■■□□ 2.29
SSBP4-206ENST00000599699 K7EQS6 105 aa29.38■■■□□ 2.29
SSBP4-206ENST00000599699 CYBBP04839 570 aa29.38■■■□□ 2.29
SSBP4-206ENST00000599699 MMEP08473 750 aa29.38■■■□□ 2.29
SSBP4-206ENST00000599699 NBL1P41271 181 aa29.38■■■□□ 2.29
SSBP4-206ENST00000599699 ARID5AQ03989 594 aa29.38■■■□□ 2.29
SSBP4-206ENST00000599699 MESP2Q0VG99 397 aa29.38■■■□□ 2.29
SSBP4-206ENST00000599699 TAF5Q15542 800 aa29.38■■■□□ 2.29
SSBP4-206ENST00000599699 SYPL2Q5VXT5 272 aa29.38■■■□□ 2.29
SSBP4-206ENST00000599699 TOGARAM2Q6ZUX3 1019 aa29.38■■■□□ 2.29
SSBP4-206ENST00000599699 FAM183BPQ6ZVS7 135 aa29.38■■■□□ 2.29
SSBP4-206ENST00000599699 BEND5Q7L4P6 421 aa29.38■■■□□ 2.29
SSBP4-206ENST00000599699 ZNF677Q86XU0 584 aa29.38■■■□□ 2.29
SSBP4-206ENST00000599699 PIWIL1Q96J94 861 aaKnown RBP29.38■■■□□ 2.29
SSBP4-206ENST00000599699 SERPINB11Q96P15 392 aa29.38■■■□□ 2.29
SSBP4-206ENST00000599699 C2orf42Q9NWW7 574 aa29.38■■■□□ 2.29
SSBP4-206ENST00000599699 LSM8O95777 96 aaKnown RBP29.37■■■□□ 2.29
SSBP4-206ENST00000599699 C2orf27AQ580R0 203 aa29.37■■■□□ 2.29
SSBP4-206ENST00000599699 NUGGCQ68CJ6 796 aa29.37■■■□□ 2.29
SSBP4-206ENST00000599699 GRAMD4Q6IC98 578 aa29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms