RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 KPNA1P52294 538 aaPredicted RBP16.08■□□□□ 0.16
UPF1-206ENST00000598471 PITX1P78337 314 aaPredicted RBP16.08■□□□□ 0.16
UPF1-206ENST00000598471 NNTQ13423 1086 aa16.08■□□□□ 0.16
UPF1-206ENST00000598471 C10orf120Q5SQS8 335 aa16.08■□□□□ 0.16
UPF1-206ENST00000598471 HECTD3Q5T447 861 aa16.08■□□□□ 0.16
UPF1-206ENST00000598471 ERMARDQ5T6L9 678 aa16.08■□□□□ 0.16
UPF1-206ENST00000598471 ADGRD2Q7Z7M1 963 aa16.08■□□□□ 0.16
UPF1-206ENST00000598471 FAM131BQ86XD5 332 aa16.08■□□□□ 0.16
UPF1-206ENST00000598471 PSTKQ8IV42 348 aaKnown RBP16.08■□□□□ 0.16
UPF1-206ENST00000598471 MAP7D3Q8IWC1 876 aa16.08■□□□□ 0.16
UPF1-206ENST00000598471 CEP112Q8N8E3 955 aa16.08■□□□□ 0.16
UPF1-206ENST00000598471 LEMD2Q8NC56 503 aa16.08■□□□□ 0.16
UPF1-206ENST00000598471 MNS1Q8NEH6 495 aa16.08■□□□□ 0.16
UPF1-206ENST00000598471 ADAM32Q8TC27 787 aa16.08■□□□□ 0.16
UPF1-206ENST00000598471 COG1Q8WTW3 980 aa16.08■□□□□ 0.16
UPF1-206ENST00000598471 HSPH1Q92598 858 aa16.08■□□□□ 0.16
UPF1-206ENST00000598471 RNF34Q969K3 372 aa16.08■□□□□ 0.16
UPF1-206ENST00000598471 CAPZA3Q96KX2 299 aa16.08■□□□□ 0.16
UPF1-206ENST00000598471 CDX2Q99626 313 aaPredicted RBP16.08■□□□□ 0.16
UPF1-206ENST00000598471 NACA2Q9H009 215 aa16.08■□□□□ 0.16
UPF1-206ENST00000598471 NSUN3Q9H649 340 aaKnown RBP16.08■□□□□ 0.16
UPF1-206ENST00000598471 L2HGDHQ9H9P8 463 aa16.08■□□□□ 0.16
UPF1-206ENST00000598471 DZANK1Q9NVP4 752 aa16.08■□□□□ 0.16
UPF1-206ENST00000598471 OSER1Q9NX31 292 aa16.08■□□□□ 0.16
UPF1-206ENST00000598471 HCFC2Q9Y5Z7 792 aa16.08■□□□□ 0.16
UPF1-206ENST00000598471 LRRD1A4D1F6 860 aa16.07■□□□□ 0.16
UPF1-206ENST00000598471 IGLV3-25P01717 112 aa16.07■□□□□ 0.16
UPF1-206ENST00000598471 SRGAP2BP0DMP2 458 aa16.07■□□□□ 0.16
UPF1-206ENST00000598471 RARAP10276 462 aa16.07■□□□□ 0.16
UPF1-206ENST00000598471 SLC2A3P11169 496 aa16.07■□□□□ 0.16
UPF1-206ENST00000598471 IL1R2P27930 398 aa16.07■□□□□ 0.16
UPF1-206ENST00000598471 ATP5C1P36542 298 aaKnown RBP16.07■□□□□ 0.16
UPF1-206ENST00000598471 COPS2P61201 443 aa16.07■□□□□ 0.16
UPF1-206ENST00000598471 EFEMP1Q12805 493 aa16.07■□□□□ 0.16
UPF1-206ENST00000598471 KRT81Q14533 505 aa16.07■□□□□ 0.16
UPF1-206ENST00000598471 PDK2Q15119 407 aa16.07■□□□□ 0.16
UPF1-206ENST00000598471 SMTNL2Q2TAL5 461 aa16.07■□□□□ 0.16
UPF1-206ENST00000598471 EFHC2Q5JST6 749 aa16.07■□□□□ 0.16
UPF1-206ENST00000598471 BRMS1LQ5PSV4 323 aa16.07■□□□□ 0.16
UPF1-206ENST00000598471 KLHDC10Q6PID8 442 aa16.07■□□□□ 0.16
UPF1-206ENST00000598471 KCTD6Q8NC69 237 aa16.07■□□□□ 0.16
UPF1-206ENST00000598471 ACTRT1Q8TDG2 376 aa16.07■□□□□ 0.16
UPF1-206ENST00000598471 MRPS31Q92665 395 aaKnown RBP16.07■□□□□ 0.16
UPF1-206ENST00000598471 CASP10Q92851 521 aa16.07■□□□□ 0.16
UPF1-206ENST00000598471 NTAN1Q96AB6 310 aa16.07■□□□□ 0.16
UPF1-206ENST00000598471 PEBP4Q96S96 227 aa16.07■□□□□ 0.16
UPF1-206ENST00000598471 SNRNP25Q9BV90 132 aaKnown RBP16.07■□□□□ 0.16
UPF1-206ENST00000598471 WDCPQ9H6R7 721 aa16.07■□□□□ 0.16
UPF1-206ENST00000598471 PIGVQ9NUD9 493 aa16.07■□□□□ 0.16
UPF1-206ENST00000598471 MARCH2Q9P0N8 246 aa16.07■□□□□ 0.16
UPF1-206ENST00000598471 RASAL2Q9UJF2 1139 aa16.07■□□□□ 0.16
UPF1-206ENST00000598471 DNMT3LQ9UJW3 386 aa16.07■□□□□ 0.16
UPF1-206ENST00000598471 TTC7AQ9ULT0 858 aaPredicted RBP16.07■□□□□ 0.16
UPF1-206ENST00000598471 AP4E1Q9UPM8 1137 aa16.07■□□□□ 0.16
UPF1-206ENST00000598471 GREB1Q4ZG55 1949 aa16.07■□□□□ 0.16
UPF1-206ENST00000598471 ZNF185O15231 689 aa16.06■□□□□ 0.16
UPF1-206ENST00000598471 PYGMP11217 842 aa16.06■□□□□ 0.16
UPF1-206ENST00000598471 PTPN2P17706 415 aa16.06■□□□□ 0.16
UPF1-206ENST00000598471 GABRR2P28476 465 aa16.06■□□□□ 0.16
UPF1-206ENST00000598471 CCR1P32246 355 aa16.06■□□□□ 0.16
UPF1-206ENST00000598471 CXCR3P49682 368 aa16.06■□□□□ 0.16
UPF1-206ENST00000598471 PGFP49763 221 aa16.06■□□□□ 0.16
UPF1-206ENST00000598471 ATXN1P54253 815 aaKnown RBP16.06■□□□□ 0.16
UPF1-206ENST00000598471 MTA1Q13330 715 aa16.06■□□□□ 0.16
UPF1-206ENST00000598471 ZNF211Q13398 564 aaPredicted RBP16.06■□□□□ 0.16
UPF1-206ENST00000598471 ADGRE1Q14246 886 aa16.06■□□□□ 0.16
UPF1-206ENST00000598471 RAB6CQ53S08 254 aa16.06■□□□□ 0.16
UPF1-206ENST00000598471 KCNT1Q5JUK3 1230 aa16.06■□□□□ 0.16
UPF1-206ENST00000598471 DCAF12L1Q5VU92 463 aa16.06■□□□□ 0.16
UPF1-206ENST00000598471 TXNRD3NBQ6F5E7 133 aa16.06■□□□□ 0.16
UPF1-206ENST00000598471 CREG2Q8IUH2 290 aa16.06■□□□□ 0.16
UPF1-206ENST00000598471 RASGEF1CQ8N431 466 aa16.06■□□□□ 0.16
UPF1-206ENST00000598471 CMASQ8NFW8 434 aaPredicted RBP16.06■□□□□ 0.16
UPF1-206ENST00000598471 MAIP1Q8WWC4 291 aa16.06■□□□□ 0.16
UPF1-206ENST00000598471 MYLIPQ8WY64 445 aa16.06■□□□□ 0.16
UPF1-206ENST00000598471 CORO1BQ9BR76 489 aa16.06■□□□□ 0.16
UPF1-206ENST00000598471 ADAM33Q9BZ11 813 aa16.06■□□□□ 0.16
UPF1-206ENST00000598471 PRKD2Q9BZL6 878 aa16.06■□□□□ 0.16
UPF1-206ENST00000598471 RAB6CQ9H0N0 254 aa16.06■□□□□ 0.16
UPF1-206ENST00000598471 ZNF334Q9HCZ1 680 aaPredicted RBP16.06■□□□□ 0.16
UPF1-206ENST00000598471 WDR6Q9NNW5 1121 aaKnown RBP16.06■□□□□ 0.16
UPF1-206ENST00000598471 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.06■□□□□ 0.16
UPF1-206ENST00000598471 KLHL11Q9NVR0 708 aa16.06■□□□□ 0.16
UPF1-206ENST00000598471 LMCD1Q9NZU5 365 aa16.06■□□□□ 0.16
UPF1-206ENST00000598471 SFMBT1Q9UHJ3 866 aa16.06■□□□□ 0.16
UPF1-206ENST00000598471 NUDT5Q9UKK9 219 aa16.06■□□□□ 0.16
UPF1-206ENST00000598471 FZD10Q9ULW2 581 aa16.06■□□□□ 0.16
UPF1-206ENST00000598471 TLR6Q9Y2C9 796 aa16.06■□□□□ 0.16
UPF1-206ENST00000598471 HBS1LQ9Y450 684 aaKnown RBP16.06■□□□□ 0.16
UPF1-206ENST00000598471 SZT2Q5T011 3432 aa16.05■□□□□ 0.16
UPF1-206ENST00000598471 PI4K2BG5E9Z4 385 aa16.05■□□□□ 0.16
UPF1-206ENST00000598471 RFPL2O75678 378 aa16.05■□□□□ 0.16
UPF1-206ENST00000598471 APOEP02649 317 aa16.05■□□□□ 0.16
UPF1-206ENST00000598471 F11P03951 625 aa16.05■□□□□ 0.16
UPF1-206ENST00000598471 MYL4P12829 197 aa16.05■□□□□ 0.16
UPF1-206ENST00000598471 ADRA1BP35368 520 aa16.05■□□□□ 0.16
UPF1-206ENST00000598471 CDH6P55285 790 aa16.05■□□□□ 0.16
UPF1-206ENST00000598471 TBX4P57082 545 aa16.05■□□□□ 0.16
UPF1-206ENST00000598471 SCAPQ12770 1279 aa16.05■□□□□ 0.16
UPF1-206ENST00000598471 PPP2R5DQ14738 602 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms