RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 A0A1W2PQH9 124 aa17.88■□□□□ 0.45
PNKP-210ENST00000597965 PRRT4C9JH25 899 aa17.88■□□□□ 0.45
PNKP-210ENST00000597965 HHLA1C9JL84 531 aa17.88■□□□□ 0.45
PNKP-210ENST00000597965 TRIM24O15164 1050 aa17.88■□□□□ 0.45
PNKP-210ENST00000597965 ACTN4O43707 911 aaKnown RBP17.88■□□□□ 0.45
PNKP-210ENST00000597965 SYNCRIPO60506 623 aaKnown RBP17.88■□□□□ 0.45
PNKP-210ENST00000597965 CD6P30203 668 aa17.88■□□□□ 0.45
PNKP-210ENST00000597965 OXTRP30559 389 aa17.88■□□□□ 0.45
PNKP-210ENST00000597965 KIF11P52732 1056 aa17.88■□□□□ 0.45
PNKP-210ENST00000597965 NFIL3Q16649 462 aa17.88■□□□□ 0.45
PNKP-210ENST00000597965 FOXD4L6Q3SYB3 417 aaPredicted RBP17.88■□□□□ 0.45
PNKP-210ENST00000597965 FOXD4L5Q5VV16 416 aaPredicted RBP17.88■□□□□ 0.45
PNKP-210ENST00000597965 KIAA1211LQ6NV74 962 aa17.88■□□□□ 0.45
PNKP-210ENST00000597965 FOXD4L3Q6VB84 417 aaPredicted RBP17.88■□□□□ 0.45
PNKP-210ENST00000597965 Q6ZNB5 142 aa17.88■□□□□ 0.45
PNKP-210ENST00000597965 TOGARAM2Q6ZUX3 1019 aa17.88■□□□□ 0.45
PNKP-210ENST00000597965 SLC41A1Q8IVJ1 513 aa17.88■□□□□ 0.45
PNKP-210ENST00000597965 HSCBQ8IWL3 235 aa17.88■□□□□ 0.45
PNKP-210ENST00000597965 GRAMD1CQ8IYS0 662 aa17.88■□□□□ 0.45
PNKP-210ENST00000597965 CADM4Q8NFZ8 388 aa17.88■□□□□ 0.45
PNKP-210ENST00000597965 FOXD4L4Q8WXT5 416 aaPredicted RBP17.88■□□□□ 0.45
PNKP-210ENST00000597965 JAKMIP2Q96AA8 810 aa17.88■□□□□ 0.45
PNKP-210ENST00000597965 ACOX2Q99424 681 aa17.88■□□□□ 0.45
PNKP-210ENST00000597965 DUSP16Q9BY84 665 aa17.88■□□□□ 0.45
PNKP-210ENST00000597965 NIF3L1Q9GZT8 377 aa17.88■□□□□ 0.45
PNKP-210ENST00000597965 PRDM16Q9HAZ2 1276 aa17.88■□□□□ 0.45
PNKP-210ENST00000597965 CD248Q9HCU0 757 aa17.88■□□□□ 0.45
PNKP-210ENST00000597965 OSER1Q9NX31 292 aa17.88■□□□□ 0.45
PNKP-210ENST00000597965 CACNA2D2Q9NY47 1150 aa17.88■□□□□ 0.45
PNKP-210ENST00000597965 FBXO10Q9UK96 956 aa17.88■□□□□ 0.45
PNKP-210ENST00000597965 RCOR1Q9UKL0 485 aa17.88■□□□□ 0.45
PNKP-210ENST00000597965 HCN2Q9UL51 889 aa17.88■□□□□ 0.45
PNKP-210ENST00000597965 STRIP2Q9ULQ0 834 aa17.88■□□□□ 0.45
PNKP-210ENST00000597965 ASPMQ8IZT6 3477 aa17.88■□□□□ 0.45
PNKP-210ENST00000597965 SPAARA0A1B0GVQ0 90 aa17.87■□□□□ 0.45
PNKP-210ENST00000597965 HYAL3O43820 417 aaPredicted RBP17.87■□□□□ 0.45
PNKP-210ENST00000597965 STC2O76061 302 aa17.87■□□□□ 0.45
PNKP-210ENST00000597965 CISD3P0C7P0 127 aa17.87■□□□□ 0.45
PNKP-210ENST00000597965 NR2F2P24468 414 aa17.87■□□□□ 0.45
PNKP-210ENST00000597965 PGFP49763 221 aa17.87■□□□□ 0.45
PNKP-210ENST00000597965 EIF4HQ15056 248 aaKnown RBP17.87■□□□□ 0.45
PNKP-210ENST00000597965 SPOPLQ6IQ16 392 aa17.87■□□□□ 0.45
PNKP-210ENST00000597965 KIAA1324Q6UXG2 1013 aaKnown RBP17.87■□□□□ 0.45
PNKP-210ENST00000597965 GPRIN1Q7Z2K8 1008 aa17.87■□□□□ 0.45
PNKP-210ENST00000597965 STON1Q9Y6Q2 735 aa17.87■□□□□ 0.45
PNKP-210ENST00000597965 IGF2RP11717 2491 aa17.87■□□□□ 0.45
PNKP-210ENST00000597965 ADAMTS9Q9P2N4 1935 aa17.86■□□□□ 0.45
PNKP-210ENST00000597965 PCDH15Q96QU1 1955 aa17.86■□□□□ 0.45
PNKP-210ENST00000597965 FAM221BA6H8Z2 402 aa17.86■□□□□ 0.45
PNKP-210ENST00000597965 TIMM44O43615 452 aa17.86■□□□□ 0.45
PNKP-210ENST00000597965 CILPO75339 1184 aa17.86■□□□□ 0.45
PNKP-210ENST00000597965 TOP3BO95985 862 aaKnown RBP17.86■□□□□ 0.45
PNKP-210ENST00000597965 PENKP01210 267 aaPredicted RBP17.86■□□□□ 0.45
PNKP-210ENST00000597965 CMA1P23946 247 aa17.86■□□□□ 0.45
PNKP-210ENST00000597965 GTF2H1P32780 548 aa17.86■□□□□ 0.45
PNKP-210ENST00000597965 PSMC2P35998 433 aaKnown RBP17.86■□□□□ 0.45
PNKP-210ENST00000597965 BHMTQ93088 406 aa17.86■□□□□ 0.45
PNKP-210ENST00000597965 ELMO3Q96BJ8 720 aa17.86■□□□□ 0.45
PNKP-210ENST00000597965 IPO9Q96P70 1041 aaKnown RBP17.86■□□□□ 0.45
PNKP-210ENST00000597965 SLC2A11Q9BYW1 496 aa17.86■□□□□ 0.45
PNKP-210ENST00000597965 UBXN6Q9BZV1 441 aa17.86■□□□□ 0.45
PNKP-210ENST00000597965 NMUR1Q9HB89 426 aa17.86■□□□□ 0.45
PNKP-210ENST00000597965 RAD54BQ9Y620 910 aa17.86■□□□□ 0.45
PNKP-210ENST00000597965 USP3Q9Y6I4 520 aa17.86■□□□□ 0.45
PNKP-210ENST00000597965 CACNA1EQ15878 2313 aa17.86■□□□□ 0.45
PNKP-210ENST00000597965 A0A1B0GTW7 788 aa17.85■□□□□ 0.45
PNKP-210ENST00000597965 SRRM3A6NNA2 597 aaPredicted RBP17.85■□□□□ 0.45
PNKP-210ENST00000597965 MEI4A8MW99 385 aa17.85■□□□□ 0.45
PNKP-210ENST00000597965 STX10O60499 249 aa17.85■□□□□ 0.45
PNKP-210ENST00000597965 ACADMP11310 421 aa17.85■□□□□ 0.45
PNKP-210ENST00000597965 CD59P13987 128 aa17.85■□□□□ 0.45
PNKP-210ENST00000597965 CD58P19256 250 aa17.85■□□□□ 0.45
PNKP-210ENST00000597965 GCLMP48507 274 aa17.85■□□□□ 0.45
PNKP-210ENST00000597965 ARID5AQ03989 594 aa17.85■□□□□ 0.45
PNKP-210ENST00000597965 TRIP6Q15654 476 aaKnown RBP17.85■□□□□ 0.45
PNKP-210ENST00000597965 KRT39Q6A163 491 aa17.85■□□□□ 0.45
PNKP-210ENST00000597965 IL27RAQ6UWB1 636 aa17.85■□□□□ 0.45
PNKP-210ENST00000597965 RSRC2Q7L4I2 434 aaKnown RBP17.85■□□□□ 0.45
PNKP-210ENST00000597965 ANKS1BQ7Z6G8 1248 aa17.85■□□□□ 0.45
PNKP-210ENST00000597965 FAM186BQ8IYM0 893 aa17.85■□□□□ 0.45
PNKP-210ENST00000597965 PRCCQ92733 491 aaPredicted RBP17.85■□□□□ 0.45
PNKP-210ENST00000597965 CCDC34Q96HJ3 373 aa17.85■□□□□ 0.45
PNKP-210ENST00000597965 HEXIM2Q96MH2 286 aaKnown RBP17.85■□□□□ 0.45
PNKP-210ENST00000597965 TWNKQ96RR1 684 aa17.85■□□□□ 0.45
PNKP-210ENST00000597965 TMEM8AQ9HCN3 771 aa17.85■□□□□ 0.45
PNKP-210ENST00000597965 ITM2CQ9NQX7 267 aa17.85■□□□□ 0.45
PNKP-210ENST00000597965 PLK2Q9NYY3 685 aa17.85■□□□□ 0.45
PNKP-210ENST00000597965 USP36Q9P275 1121 aaKnown RBP17.85■□□□□ 0.45
PNKP-210ENST00000597965 THAP10Q9P2Z0 257 aaPredicted RBP17.85■□□□□ 0.45
PNKP-210ENST00000597965 RASAL2Q9UJF2 1139 aa17.85■□□□□ 0.45
PNKP-210ENST00000597965 RHOBTB3O94955 611 aa17.84■□□□□ 0.45
PNKP-210ENST00000597965 NCAM1P13591 858 aa17.84■□□□□ 0.45
PNKP-210ENST00000597965 PFKFB1P16118 471 aa17.84■□□□□ 0.45
PNKP-210ENST00000597965 CORO1AP31146 461 aaKnown RBP17.84■□□□□ 0.45
PNKP-210ENST00000597965 MFAP3P55082 362 aa17.84■□□□□ 0.45
PNKP-210ENST00000597965 ZNF445P59923 1031 aa17.84■□□□□ 0.45
PNKP-210ENST00000597965 DNM1Q05193 864 aaKnown RBP17.84■□□□□ 0.45
PNKP-210ENST00000597965 ENPP2Q13822 863 aa17.84■□□□□ 0.45
PNKP-210ENST00000597965 FUT11Q495W5 492 aa17.84■□□□□ 0.45
PNKP-210ENST00000597965 C1orf220Q5T0J3 134 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms