RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 RRM1P23921 792 aa14.98□□□□□ -0.01
VRK3-213ENST00000597215 GDI1P31150 447 aa14.98□□□□□ -0.01
VRK3-213ENST00000597215 NNTQ13423 1086 aa14.98□□□□□ -0.01
VRK3-213ENST00000597215 TRIP4Q15650 581 aaPredicted RBP14.98□□□□□ -0.01
VRK3-213ENST00000597215 TAC4Q86UU9 113 aa14.98□□□□□ -0.01
VRK3-213ENST00000597215 TMTC1Q8IUR5 882 aa14.98□□□□□ -0.01
VRK3-213ENST00000597215 CCDC170Q8IYT3 715 aa14.98□□□□□ -0.01
VRK3-213ENST00000597215 RIN3Q8TB24 985 aa14.98□□□□□ -0.01
VRK3-213ENST00000597215 PLD4Q96BZ4 506 aa14.98□□□□□ -0.01
VRK3-213ENST00000597215 BRD9Q9H8M2 597 aa14.98□□□□□ -0.01
VRK3-213ENST00000597215 FAM204AQ9H8W3 233 aa14.98□□□□□ -0.01
VRK3-213ENST00000597215 PARVAQ9NVD7 372 aa14.98□□□□□ -0.01
VRK3-213ENST00000597215 NENFQ9UMX5 172 aa14.98□□□□□ -0.01
VRK3-213ENST00000597215 DUSP12Q9UNI6 340 aa14.98□□□□□ -0.01
VRK3-213ENST00000597215 TCRBV5S1A1TA0A578 114 aa14.97□□□□□ -0.01
VRK3-213ENST00000597215 ANKRD62A6NC57 917 aa14.97□□□□□ -0.01
VRK3-213ENST00000597215 SIGLEC16A6NMB1 481 aa14.97□□□□□ -0.01
VRK3-213ENST00000597215 SLC9A3R1O14745 358 aaPredicted RBP14.97□□□□□ -0.01
VRK3-213ENST00000597215 ATMINO43313 823 aaPredicted RBP14.97□□□□□ -0.01
VRK3-213ENST00000597215 MSI1O43347 362 aaKnown RBP14.97□□□□□ -0.01
VRK3-213ENST00000597215 STC2O76061 302 aa14.97□□□□□ -0.01
VRK3-213ENST00000597215 TRUB2O95900 331 aaKnown RBP14.97□□□□□ -0.01
VRK3-213ENST00000597215 IGLV3-25P01717 112 aa14.97□□□□□ -0.01
VRK3-213ENST00000597215 SRFP11831 508 aa14.97□□□□□ -0.01
VRK3-213ENST00000597215 GBP1P32455 592 aa14.97□□□□□ -0.01
VRK3-213ENST00000597215 CYLC1P35663 651 aaPredicted RBP14.97□□□□□ -0.01
VRK3-213ENST00000597215 FLT3P36888 993 aa14.97□□□□□ -0.01
VRK3-213ENST00000597215 IFNAR2P48551 515 aa14.97□□□□□ -0.01
VRK3-213ENST00000597215 PDGFRLQ15198 375 aa14.97□□□□□ -0.01
VRK3-213ENST00000597215 PLEKHA7Q6IQ23 1121 aa14.97□□□□□ -0.01
VRK3-213ENST00000597215 DNAAF5Q86Y56 855 aa14.97□□□□□ -0.01
VRK3-213ENST00000597215 UBALD2Q8IYN6 164 aa14.97□□□□□ -0.01
VRK3-213ENST00000597215 ADAM32Q8TC27 787 aa14.97□□□□□ -0.01
VRK3-213ENST00000597215 OSCP1Q8WVF1 389 aa14.97□□□□□ -0.01
VRK3-213ENST00000597215 DDX23Q9BUQ8 820 aaKnown RBP14.97□□□□□ -0.01
VRK3-213ENST00000597215 DCLK3Q9C098 648 aa14.97□□□□□ -0.01
VRK3-213ENST00000597215 SPTLC3Q9NUV7 552 aa14.97□□□□□ -0.01
VRK3-213ENST00000597215 TMEM51Q9NW97 253 aa14.97□□□□□ -0.01
VRK3-213ENST00000597215 TBC1D14Q9P2M4 693 aa14.97□□□□□ -0.01
VRK3-213ENST00000597215 CNOT8Q9UFF9 292 aaKnown RBP14.97□□□□□ -0.01
VRK3-213ENST00000597215 MUTYHQ9UIF7 546 aa14.97□□□□□ -0.01
VRK3-213ENST00000597215 TLR6Q9Y2C9 796 aa14.97□□□□□ -0.01
VRK3-213ENST00000597215 SCINQ9Y6U3 715 aa14.97□□□□□ -0.01
VRK3-213ENST00000597215 NCOR1O75376 2440 aa14.97□□□□□ -0.01
VRK3-213ENST00000597215 C2CD4BA6NLJ0 364 aa14.96□□□□□ -0.01
VRK3-213ENST00000597215 IRAK2O43187 625 aa14.96□□□□□ -0.01
VRK3-213ENST00000597215 NARSO43776 548 aaKnown RBP14.96□□□□□ -0.01
VRK3-213ENST00000597215 GJB6O95452 261 aa14.96□□□□□ -0.01
VRK3-213ENST00000597215 IGLV3-27P01718 113 aa14.96□□□□□ -0.01
VRK3-213ENST00000597215 PDGFRAP16234 1089 aa14.96□□□□□ -0.01
VRK3-213ENST00000597215 ABCB4P21439 1286 aa14.96□□□□□ -0.01
VRK3-213ENST00000597215 CORO1AP31146 461 aaKnown RBP14.96□□□□□ -0.01
VRK3-213ENST00000597215 HARS2P49590 506 aaKnown RBP14.96□□□□□ -0.01
VRK3-213ENST00000597215 SULT1E1P49888 294 aa14.96□□□□□ -0.01
VRK3-213ENST00000597215 TBX4P57082 545 aa14.96□□□□□ -0.01
VRK3-213ENST00000597215 GPC5P78333 572 aa14.96□□□□□ -0.01
VRK3-213ENST00000597215 PITX1P78337 314 aaPredicted RBP14.96□□□□□ -0.01
VRK3-213ENST00000597215 PFKPQ01813 784 aa14.96□□□□□ -0.01
VRK3-213ENST00000597215 RING1Q06587 406 aa14.96□□□□□ -0.01
VRK3-213ENST00000597215 SLC25A52Q3SY17 297 aa14.96□□□□□ -0.01
VRK3-213ENST00000597215 PPP1R15BQ5SWA1 713 aa14.96□□□□□ -0.01
VRK3-213ENST00000597215 NUGGCQ68CJ6 796 aa14.96□□□□□ -0.01
VRK3-213ENST00000597215 DCUN1D2Q6PH85 259 aa14.96□□□□□ -0.01
VRK3-213ENST00000597215 HTR3DQ70Z44 454 aa14.96□□□□□ -0.01
VRK3-213ENST00000597215 EMC1Q8N766 993 aa14.96□□□□□ -0.01
VRK3-213ENST00000597215 JOSD2Q8TAC2 188 aa14.96□□□□□ -0.01
VRK3-213ENST00000597215 IRF7Q92985 503 aa14.96□□□□□ -0.01
VRK3-213ENST00000597215 OTUB2Q96DC9 234 aa14.96□□□□□ -0.01
VRK3-213ENST00000597215 MCEEQ96PE7 176 aa14.96□□□□□ -0.01
VRK3-213ENST00000597215 NPY6RQ99463 290 aa14.96□□□□□ -0.01
VRK3-213ENST00000597215 BAG1Q99933 345 aaPredicted RBP14.96□□□□□ -0.01
VRK3-213ENST00000597215 MRPL47Q9HD33 250 aaKnown RBP14.96□□□□□ -0.01
VRK3-213ENST00000597215 SLC2A4RGQ9NR83 387 aa14.96□□□□□ -0.01
VRK3-213ENST00000597215 DDIT4Q9NX09 232 aa14.96□□□□□ -0.01
VRK3-213ENST00000597215 DUS2Q9NX74 493 aaKnown RBP14.96□□□□□ -0.01
VRK3-213ENST00000597215 ZNF510Q9Y2H8 683 aa14.96□□□□□ -0.01
VRK3-213ENST00000597215 WNT6Q9Y6F9 365 aa14.96□□□□□ -0.01
VRK3-213ENST00000597215 M0QYT0 321 aa14.95□□□□□ -0.02
VRK3-213ENST00000597215 H2AFZP0C0S5 128 aa14.95□□□□□ -0.02
VRK3-213ENST00000597215 DESP17661 470 aa14.95□□□□□ -0.02
VRK3-213ENST00000597215 GPD1P21695 349 aa14.95□□□□□ -0.02
VRK3-213ENST00000597215 SDC4P31431 198 aa14.95□□□□□ -0.02
VRK3-213ENST00000597215 RFC1P35251 1148 aaPredicted RBP14.95□□□□□ -0.02
VRK3-213ENST00000597215 PTPN9P43378 593 aa14.95□□□□□ -0.02
VRK3-213ENST00000597215 GALCP54803 685 aa14.95□□□□□ -0.02
VRK3-213ENST00000597215 MAMLD1Q13495 774 aa14.95□□□□□ -0.02
VRK3-213ENST00000597215 C10orf76Q5T2E6 689 aa14.95□□□□□ -0.02
VRK3-213ENST00000597215 TRNP1Q6NT89 227 aa14.95□□□□□ -0.02
VRK3-213ENST00000597215 Q6ZNB5 142 aa14.95□□□□□ -0.02
VRK3-213ENST00000597215 H2AFVQ71UI9 128 aa14.95□□□□□ -0.02
VRK3-213ENST00000597215 UNC45BQ8IWX7 931 aa14.95□□□□□ -0.02
VRK3-213ENST00000597215 RXFP2Q8WXD0 754 aa14.95□□□□□ -0.02
VRK3-213ENST00000597215 CTNNBL1Q8WYA6 563 aaPredicted RBP14.95□□□□□ -0.02
VRK3-213ENST00000597215 DNASE1L2Q92874 299 aa14.95□□□□□ -0.02
VRK3-213ENST00000597215 ATP2A3Q93084 1043 aa14.95□□□□□ -0.02
VRK3-213ENST00000597215 NT5C3BQ969T7 300 aa14.95□□□□□ -0.02
VRK3-213ENST00000597215 WBP2Q969T9 261 aa14.95□□□□□ -0.02
VRK3-213ENST00000597215 PGAP3Q96FM1 320 aaPredicted RBP14.95□□□□□ -0.02
VRK3-213ENST00000597215 ASIC4Q96FT7 647 aa14.95□□□□□ -0.02
VRK3-213ENST00000597215 ZFYVE19Q96K21 471 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms