RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 B3GALNT2Q8NCR0 500 aa23.52■■□□□ 1.36
SRRM1-222ENST00000596378 PTPRN2Q92932 1015 aa23.52■■□□□ 1.36
SRRM1-222ENST00000596378 IQANK1A0A1B0GTG1 560 aa23.51■■□□□ 1.35
SRRM1-222ENST00000596378 HAS3O00219 553 aa23.51■■□□□ 1.35
SRRM1-222ENST00000596378 UGT1A9O60656 530 aa23.51■■□□□ 1.35
SRRM1-222ENST00000596378 LPXNO60711 386 aa23.51■■□□□ 1.35
SRRM1-222ENST00000596378 PYGBP11216 843 aa23.51■■□□□ 1.35
SRRM1-222ENST00000596378 CYP2B6P20813 491 aa23.51■■□□□ 1.35
SRRM1-222ENST00000596378 SULT1E1P49888 294 aa23.51■■□□□ 1.35
SRRM1-222ENST00000596378 XKR4Q5GH76 650 aa23.51■■□□□ 1.35
SRRM1-222ENST00000596378 ZNF534Q76KX8 674 aa23.51■■□□□ 1.35
SRRM1-222ENST00000596378 UGT1A7Q9HAW7 530 aa23.51■■□□□ 1.35
SRRM1-222ENST00000596378 UGT1A10Q9HAW8 530 aa23.51■■□□□ 1.35
SRRM1-222ENST00000596378 UGT1A8Q9HAW9 530 aa23.51■■□□□ 1.35
SRRM1-222ENST00000596378 SMYD2Q9NRG4 433 aa23.51■■□□□ 1.35
SRRM1-222ENST00000596378 DTLQ9NZJ0 730 aa23.51■■□□□ 1.35
SRRM1-222ENST00000596378 CHKBQ9Y259 395 aa23.51■■□□□ 1.35
SRRM1-222ENST00000596378 NQO1P15559 274 aaKnown RBP23.51■■□□□ 1.35
SRRM1-222ENST00000596378 NDUFV1P49821 464 aa23.51■■□□□ 1.35
SRRM1-222ENST00000596378 GPR162Q16538 588 aa23.51■■□□□ 1.35
SRRM1-222ENST00000596378 SV2CQ496J9 727 aa23.51■■□□□ 1.35
SRRM1-222ENST00000596378 TWF2Q6IBS0 349 aaKnown RBP23.51■■□□□ 1.35
SRRM1-222ENST00000596378 C2orf69Q8N8R5 385 aa23.51■■□□□ 1.35
SRRM1-222ENST00000596378 KLHL29Q96CT2 875 aa23.51■■□□□ 1.35
SRRM1-222ENST00000596378 ERP27Q96DN0 273 aa23.51■■□□□ 1.35
SRRM1-222ENST00000596378 ZNF236Q9UL36 1845 aa23.5■■□□□ 1.35
SRRM1-222ENST00000596378 PTGESO14684 152 aa23.5■■□□□ 1.35
SRRM1-222ENST00000596378 PNPLA4P41247 253 aa23.5■■□□□ 1.35
SRRM1-222ENST00000596378 OVGP1Q12889 678 aa23.5■■□□□ 1.35
SRRM1-222ENST00000596378 DCAF6Q58WW2 860 aa23.5■■□□□ 1.35
SRRM1-222ENST00000596378 VPS52Q8N1B4 723 aa23.5■■□□□ 1.35
SRRM1-222ENST00000596378 NCAPGQ9BPX3 1015 aa23.5■■□□□ 1.35
SRRM1-222ENST00000596378 NPHS2Q9NP85 383 aa23.5■■□□□ 1.35
SRRM1-222ENST00000596378 USP3Q9Y6I4 520 aa23.5■■□□□ 1.35
SRRM1-222ENST00000596378 MYO18AQ92614 2054 aaKnown RBP23.5■■□□□ 1.35
SRRM1-222ENST00000596378 CFAP73A6NFT4 308 aa23.5■■□□□ 1.35
SRRM1-222ENST00000596378 TM9SF1O15321 606 aa23.5■■□□□ 1.35
SRRM1-222ENST00000596378 VAV1P15498 845 aa23.5■■□□□ 1.35
SRRM1-222ENST00000596378 MATKP42679 507 aa23.5■■□□□ 1.35
SRRM1-222ENST00000596378 OTUD1Q5VV17 481 aaPredicted RBP23.5■■□□□ 1.35
SRRM1-222ENST00000596378 WSCD1Q658N2 575 aa23.5■■□□□ 1.35
SRRM1-222ENST00000596378 LIMS2Q7Z4I7 341 aa23.5■■□□□ 1.35
SRRM1-222ENST00000596378 C10orf82Q8WW14 230 aa23.5■■□□□ 1.35
SRRM1-222ENST00000596378 HSFY1Q96LI6 401 aa23.5■■□□□ 1.35
SRRM1-222ENST00000596378 QKIQ96PU8 341 aaKnown RBP eCLIP23.5■■□□□ 1.35
SRRM1-222ENST00000596378 FAM111AQ96PZ2 611 aa23.5■■□□□ 1.35
SRRM1-222ENST00000596378 LGMNQ99538 433 aa23.5■■□□□ 1.35
SRRM1-222ENST00000596378 MAD1L1Q9Y6D9 718 aa23.5■■□□□ 1.35
SRRM1-222ENST00000596378 ZNF487B1APH4 448 aa23.49■■□□□ 1.35
SRRM1-222ENST00000596378 XPO1O14980 1071 aaKnown RBP23.49■■□□□ 1.35
SRRM1-222ENST00000596378 XPOTO43592 962 aaKnown RBP23.49■■□□□ 1.35
SRRM1-222ENST00000596378 ATP6V1G2O95670 118 aa23.49■■□□□ 1.35
SRRM1-222ENST00000596378 MAGEA6P43360 314 aa23.49■■□□□ 1.35
SRRM1-222ENST00000596378 ACADSBP45954 432 aa23.49■■□□□ 1.35
SRRM1-222ENST00000596378 UNC5AQ6ZN44 842 aa23.49■■□□□ 1.35
SRRM1-222ENST00000596378 DENND5BQ6ZUT9 1274 aa23.49■■□□□ 1.35
SRRM1-222ENST00000596378 SH2D5Q6ZV89 423 aa23.49■■□□□ 1.35
SRRM1-222ENST00000596378 PNPLA8Q9NP80 782 aa23.49■■□□□ 1.35
SRRM1-222ENST00000596378 BAIAP2L1Q9UHR4 511 aa23.49■■□□□ 1.35
SRRM1-222ENST00000596378 USH1CQ9Y6N9 552 aa23.49■■□□□ 1.35
SRRM1-222ENST00000596378 C17orf102A2RUQ5 167 aa23.49■■□□□ 1.35
SRRM1-222ENST00000596378 TRIM49D1C9J1S8 452 aa23.49■■□□□ 1.35
SRRM1-222ENST00000596378 GCATO75600 419 aa23.49■■□□□ 1.35
SRRM1-222ENST00000596378 SPAG6O75602 509 aa23.49■■□□□ 1.35
SRRM1-222ENST00000596378 KRT16P08779 473 aa23.49■■□□□ 1.35
SRRM1-222ENST00000596378 CRYBB1P53674 252 aaPredicted RBP23.49■■□□□ 1.35
SRRM1-222ENST00000596378 KIAA0319Q5VV43 1072 aa23.49■■□□□ 1.35
SRRM1-222ENST00000596378 HEATR6Q6AI08 1181 aaKnown RBP23.49■■□□□ 1.35
SRRM1-222ENST00000596378 TRMT10BQ6PF06 316 aaKnown RBP23.49■■□□□ 1.35
SRRM1-222ENST00000596378 PAQR9Q6ZVX9 377 aa23.49■■□□□ 1.35
SRRM1-222ENST00000596378 SLC26A11Q86WA9 606 aa23.49■■□□□ 1.35
SRRM1-222ENST00000596378 ALKBH8Q96BT7 664 aaKnown RBP23.49■■□□□ 1.35
SRRM1-222ENST00000596378 APOPT1Q96IL0 206 aa23.49■■□□□ 1.35
SRRM1-222ENST00000596378 TNIP3Q96KP6 325 aa23.49■■□□□ 1.35
SRRM1-222ENST00000596378 CEP41Q9BYV8 373 aa23.49■■□□□ 1.35
SRRM1-222ENST00000596378 CYB561D2O14569 222 aa23.48■■□□□ 1.35
SRRM1-222ENST00000596378 MFSD11O43934 449 aa23.48■■□□□ 1.35
SRRM1-222ENST00000596378 SCNN1AP37088 669 aa23.48■■□□□ 1.35
SRRM1-222ENST00000596378 CPT1AP50416 773 aa23.48■■□□□ 1.35
SRRM1-222ENST00000596378 AFF1P51825 1210 aaKnown RBP23.48■■□□□ 1.35
SRRM1-222ENST00000596378 NEK3P51956 506 aa23.48■■□□□ 1.35
SRRM1-222ENST00000596378 FKBP1BP68106 108 aa23.48■■□□□ 1.35
SRRM1-222ENST00000596378 BMPR2Q13873 1038 aa23.48■■□□□ 1.35
SRRM1-222ENST00000596378 PLEKHG4Q58EX7 1191 aa23.48■■□□□ 1.35
SRRM1-222ENST00000596378 ARCQ7LC44 396 aa23.48■■□□□ 1.35
SRRM1-222ENST00000596378 DUSP16Q9BY84 665 aa23.48■■□□□ 1.35
SRRM1-222ENST00000596378 CYLDQ9NQC7 956 aa23.48■■□□□ 1.35
SRRM1-222ENST00000596378 FZD10Q9ULW2 581 aa23.48■■□□□ 1.35
SRRM1-222ENST00000596378 RARBP10826 455 aa23.48■■□□□ 1.35
SRRM1-222ENST00000596378 CCDC15Q0P6D6 951 aa23.48■■□□□ 1.35
SRRM1-222ENST00000596378 SLC25A52Q3SY17 297 aa23.48■■□□□ 1.35
SRRM1-222ENST00000596378 EFHC1Q5JVL4 640 aa23.48■■□□□ 1.35
SRRM1-222ENST00000596378 CDHR3Q6ZTQ4 885 aa23.48■■□□□ 1.35
SRRM1-222ENST00000596378 HFE2Q6ZVN8 426 aa23.48■■□□□ 1.35
SRRM1-222ENST00000596378 STRADAQ7RTN6 431 aa23.48■■□□□ 1.35
SRRM1-222ENST00000596378 LRRC6Q86X45 466 aa23.48■■□□□ 1.35
SRRM1-222ENST00000596378 TTC17Q96AE7 1141 aa23.48■■□□□ 1.35
SRRM1-222ENST00000596378 SIGLEC10Q96LC7 697 aa23.48■■□□□ 1.35
SRRM1-222ENST00000596378 PIH1D1Q9NWS0 290 aaKnown RBP23.48■■□□□ 1.35
SRRM1-222ENST00000596378 A8MUI8 341 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms