RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 AVPR1AP37288 418 aa11.04□□□□□ -0.64
LIG1-210ENST00000596332 MATKP42679 507 aa11.04□□□□□ -0.64
LIG1-210ENST00000596332 ATXN1P54253 815 aaKnown RBP11.04□□□□□ -0.64
LIG1-210ENST00000596332 GRM2Q14416 872 aa11.04□□□□□ -0.64
LIG1-210ENST00000596332 CCDC122Q5T0U0 273 aa11.04□□□□□ -0.64
LIG1-210ENST00000596332 MIB1Q86YT6 1006 aa11.04□□□□□ -0.64
LIG1-210ENST00000596332 ADGRG2Q8IZP9 1017 aa11.04□□□□□ -0.64
LIG1-210ENST00000596332 ADAM32Q8TC27 787 aa11.04□□□□□ -0.64
LIG1-210ENST00000596332 NXPE3Q969Y0 559 aa11.04□□□□□ -0.64
LIG1-210ENST00000596332 MYEOVQ96EZ4 313 aa11.04□□□□□ -0.64
LIG1-210ENST00000596332 PGAP3Q96FM1 320 aaPredicted RBP11.04□□□□□ -0.64
LIG1-210ENST00000596332 ZFYVE19Q96K21 471 aa11.04□□□□□ -0.64
LIG1-210ENST00000596332 FCRL2Q96LA5 508 aaPredicted RBP11.04□□□□□ -0.64
LIG1-210ENST00000596332 GCNAQ96QF7 691 aa11.04□□□□□ -0.64
LIG1-210ENST00000596332 MAGEB5Q9BZ81 275 aa11.04□□□□□ -0.64
LIG1-210ENST00000596332 THAP2Q9H0W7 228 aa11.04□□□□□ -0.64
LIG1-210ENST00000596332 SLITRK6Q9H5Y7 841 aa11.04□□□□□ -0.64
LIG1-210ENST00000596332 HPS4Q9NQG7 708 aa11.04□□□□□ -0.64
LIG1-210ENST00000596332 METTL5Q9NRN9 209 aaKnown RBP11.04□□□□□ -0.64
LIG1-210ENST00000596332 MARCH2Q9P0N8 246 aa11.04□□□□□ -0.64
LIG1-210ENST00000596332 CEP83Q9Y592 693 aa11.04□□□□□ -0.64
LIG1-210ENST00000596332 MYO10Q9HD67 2058 aa11.04□□□□□ -0.64
LIG1-210ENST00000596332 A0A0U1RQJ8 604 aa11.03□□□□□ -0.64
LIG1-210ENST00000596332 KCNU1A8MYU2 1149 aa11.03□□□□□ -0.64
LIG1-210ENST00000596332 IRAK2O43187 625 aa11.03□□□□□ -0.64
LIG1-210ENST00000596332 SART1O43290 800 aaKnown RBP11.03□□□□□ -0.64
LIG1-210ENST00000596332 TRUB2O95900 331 aaKnown RBP11.03□□□□□ -0.64
LIG1-210ENST00000596332 CALB1P05937 261 aa11.03□□□□□ -0.64
LIG1-210ENST00000596332 MBL2P11226 248 aaPredicted RBP11.03□□□□□ -0.64
LIG1-210ENST00000596332 RALAP11233 206 aa11.03□□□□□ -0.64
LIG1-210ENST00000596332 PSMC3P17980 439 aa11.03□□□□□ -0.64
LIG1-210ENST00000596332 RNASE9P60153 205 aaKnown RBP11.03□□□□□ -0.64
LIG1-210ENST00000596332 TNK2Q07912 1038 aa11.03□□□□□ -0.64
LIG1-210ENST00000596332 TDGQ13569 410 aa11.03□□□□□ -0.64
LIG1-210ENST00000596332 EML3Q32P44 896 aa11.03□□□□□ -0.64
LIG1-210ENST00000596332 DCAF6Q58WW2 860 aa11.03□□□□□ -0.64
LIG1-210ENST00000596332 FAM102AQ5T9C2 384 aaPredicted RBP11.03□□□□□ -0.64
LIG1-210ENST00000596332 TRIM68Q6AZZ1 485 aa11.03□□□□□ -0.64
LIG1-210ENST00000596332 NADSYN1Q6IA69 706 aa11.03□□□□□ -0.64
LIG1-210ENST00000596332 MTSS1LQ765P7 747 aa11.03□□□□□ -0.64
LIG1-210ENST00000596332 BBS7Q8IWZ6 715 aa11.03□□□□□ -0.64
LIG1-210ENST00000596332 FAM217AQ8IXS0 508 aa11.03□□□□□ -0.64
LIG1-210ENST00000596332 KIAA1958Q8N8K9 716 aa11.03□□□□□ -0.64
LIG1-210ENST00000596332 BPIFB1Q8TDL5 484 aa11.03□□□□□ -0.64
LIG1-210ENST00000596332 IPO4Q8TEX9 1081 aaKnown RBP11.03□□□□□ -0.64
LIG1-210ENST00000596332 RXFP2Q8WXD0 754 aa11.03□□□□□ -0.64
LIG1-210ENST00000596332 ATRIPQ8WXE1 791 aa11.03□□□□□ -0.64
LIG1-210ENST00000596332 FAM149B1Q96BN6 582 aa11.03□□□□□ -0.64
LIG1-210ENST00000596332 CFAP57Q96MR6 1250 aa11.03□□□□□ -0.64
LIG1-210ENST00000596332 UHRF1Q96T88 793 aaPredicted RBP11.03□□□□□ -0.64
LIG1-210ENST00000596332 TBCBQ99426 244 aa11.03□□□□□ -0.64
LIG1-210ENST00000596332 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.03□□□□□ -0.64
LIG1-210ENST00000596332 COL25A1Q9BXS0 654 aaPredicted RBP11.03□□□□□ -0.64
LIG1-210ENST00000596332 KIF9Q9HAQ2 790 aa11.03□□□□□ -0.64
LIG1-210ENST00000596332 PIGVQ9NUD9 493 aa11.03□□□□□ -0.64
LIG1-210ENST00000596332 SEPT11Q9NVA2 429 aaKnown RBP11.03□□□□□ -0.64
LIG1-210ENST00000596332 CFAP97Q9P2B7 532 aa11.03□□□□□ -0.64
LIG1-210ENST00000596332 WDR35Q9P2L0 1181 aa11.03□□□□□ -0.64
LIG1-210ENST00000596332 XPO7Q9UIA9 1087 aaKnown RBP11.03□□□□□ -0.64
LIG1-210ENST00000596332 MUTYHQ9UIF7 546 aa11.03□□□□□ -0.64
LIG1-210ENST00000596332 RASAL2Q9UJF2 1139 aa11.03□□□□□ -0.64
LIG1-210ENST00000596332 STOML2Q9UJZ1 356 aa11.03□□□□□ -0.64
LIG1-210ENST00000596332 TFR2Q9UP52 801 aa11.03□□□□□ -0.64
LIG1-210ENST00000596332 EPN1Q9Y6I3 576 aaPredicted RBP11.03□□□□□ -0.64
LIG1-210ENST00000596332 SLC12A8A0AV02 714 aa11.02□□□□□ -0.65
LIG1-210ENST00000596332 E2F8A0AVK6 867 aa11.02□□□□□ -0.65
LIG1-210ENST00000596332 ANKRD62A6NC57 917 aa11.02□□□□□ -0.65
LIG1-210ENST00000596332 EIF3CLB5ME19 914 aaKnown RBP11.02□□□□□ -0.65
LIG1-210ENST00000596332 CHADO15335 359 aa11.02□□□□□ -0.65
LIG1-210ENST00000596332 KRT3P12035 628 aa11.02□□□□□ -0.65
LIG1-210ENST00000596332 ARSAP15289 507 aa11.02□□□□□ -0.65
LIG1-210ENST00000596332 PTPN9P43378 593 aa11.02□□□□□ -0.65
LIG1-210ENST00000596332 CXCR3P49682 368 aa11.02□□□□□ -0.65
LIG1-210ENST00000596332 CCZ1BP86790 482 aa11.02□□□□□ -0.65
LIG1-210ENST00000596332 CCZ1P86791 482 aaPredicted RBP11.02□□□□□ -0.65
LIG1-210ENST00000596332 RING1Q06587 406 aa11.02□□□□□ -0.65
LIG1-210ENST00000596332 NNTQ13423 1086 aa11.02□□□□□ -0.65
LIG1-210ENST00000596332 TCEAL1Q15170 157 aa11.02□□□□□ -0.65
LIG1-210ENST00000596332 C15orf59Q2T9L4 293 aaPredicted RBP11.02□□□□□ -0.65
LIG1-210ENST00000596332 SLC25A52Q3SY17 297 aa11.02□□□□□ -0.65
LIG1-210ENST00000596332 RHBDF2Q6PJF5 856 aa11.02□□□□□ -0.65
LIG1-210ENST00000596332 TOGARAM2Q6ZUX3 1019 aa11.02□□□□□ -0.65
LIG1-210ENST00000596332 CYP4V2Q6ZWL3 525 aaPredicted RBP11.02□□□□□ -0.65
LIG1-210ENST00000596332 CPNE8Q86YQ8 564 aa11.02□□□□□ -0.65
LIG1-210ENST00000596332 TMTC1Q8IUR5 882 aa11.02□□□□□ -0.65
LIG1-210ENST00000596332 ZNF687Q8N1G0 1237 aa11.02□□□□□ -0.65
LIG1-210ENST00000596332 OSCP1Q8WVF1 389 aa11.02□□□□□ -0.65
LIG1-210ENST00000596332 E2F7Q96AV8 911 aa11.02□□□□□ -0.65
LIG1-210ENST00000596332 CCDC42Q96M95 316 aa11.02□□□□□ -0.65
LIG1-210ENST00000596332 EIF3CQ99613 913 aaKnown RBP11.02□□□□□ -0.65
LIG1-210ENST00000596332 PRMT1Q99873 361 aaKnown RBP11.02□□□□□ -0.65
LIG1-210ENST00000596332 TRPV5Q9NQA5 729 aa11.02□□□□□ -0.65
LIG1-210ENST00000596332 SLC2A4RGQ9NR83 387 aa11.02□□□□□ -0.65
LIG1-210ENST00000596332 TMPRSS4Q9NRS4 437 aa11.02□□□□□ -0.65
LIG1-210ENST00000596332 OLA1Q9NTK5 396 aaKnown RBP11.02□□□□□ -0.65
LIG1-210ENST00000596332 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.02□□□□□ -0.65
LIG1-210ENST00000596332 CNOT8Q9UFF9 292 aaKnown RBP11.02□□□□□ -0.65
LIG1-210ENST00000596332 SALL4Q9UJQ4 1053 aa11.02□□□□□ -0.65
LIG1-210ENST00000596332 AGO1Q9UL18 857 aaKnown RBP11.02□□□□□ -0.65
LIG1-210ENST00000596332 STRIP2Q9ULQ0 834 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms