RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 OLIG1Q8TAK6 271 aa16.06■□□□□ 0.16
USE1-206ENST00000595101 TBC1D14Q9P2M4 693 aa16.06■□□□□ 0.16
USE1-206ENST00000595101 HOXC13P31276 330 aa16.05■□□□□ 0.16
USE1-206ENST00000595101 ZNF445P59923 1031 aa16.05■□□□□ 0.16
USE1-206ENST00000595101 FSTL4Q6MZW2 842 aa16.05■□□□□ 0.16
USE1-206ENST00000595101 DQX1Q8TE96 717 aaKnown RBP16.05■□□□□ 0.16
USE1-206ENST00000595101 CLDN23Q96B33 292 aa16.05■□□□□ 0.16
USE1-206ENST00000595101 XPO4Q9C0E2 1151 aaKnown RBP16.05■□□□□ 0.16
USE1-206ENST00000595101 SPHK2Q9NRA0 654 aa16.05■□□□□ 0.16
USE1-206ENST00000595101 C2orf42Q9NWW7 574 aa16.05■□□□□ 0.16
USE1-206ENST00000595101 STRIP2Q9ULQ0 834 aa16.05■□□□□ 0.16
USE1-206ENST00000595101 TRDMT1O14717 391 aaKnown RBP16.05■□□□□ 0.16
USE1-206ENST00000595101 SLC9A3R1O14745 358 aaPredicted RBP16.05■□□□□ 0.16
USE1-206ENST00000595101 EGFP01133 1207 aa16.05■□□□□ 0.16
USE1-206ENST00000595101 CYP1A1P04798 512 aaPredicted RBP16.05■□□□□ 0.16
USE1-206ENST00000595101 YWHAZP63104 245 aaKnown RBP16.05■□□□□ 0.16
USE1-206ENST00000595101 TCF15Q12870 199 aa16.05■□□□□ 0.16
USE1-206ENST00000595101 CCINQ13939 588 aa16.05■□□□□ 0.16
USE1-206ENST00000595101 TRIP4Q15650 581 aaPredicted RBP16.05■□□□□ 0.16
USE1-206ENST00000595101 TMEM196Q5HYL7 178 aa16.05■□□□□ 0.16
USE1-206ENST00000595101 MSANTD2Q6P1R3 559 aa16.05■□□□□ 0.16
USE1-206ENST00000595101 DTWD2Q8NBA8 298 aa16.05■□□□□ 0.16
USE1-206ENST00000595101 ADAM33Q9BZ11 813 aa16.05■□□□□ 0.16
USE1-206ENST00000595101 OSBPL6Q9BZF3 934 aa16.05■□□□□ 0.16
USE1-206ENST00000595101 SYNCQ9H7C4 482 aa16.05■□□□□ 0.16
USE1-206ENST00000595101 OLA1Q9NTK5 396 aaKnown RBP16.05■□□□□ 0.16
USE1-206ENST00000595101 POLR3BQ9NW08 1133 aaPredicted RBP16.05■□□□□ 0.16
USE1-206ENST00000595101 PLK2Q9NYY3 685 aa16.05■□□□□ 0.16
USE1-206ENST00000595101 CALCOCO1Q9P1Z2 691 aa16.05■□□□□ 0.16
USE1-206ENST00000595101 MRPS17Q9Y2R5 130 aaKnown RBP16.05■□□□□ 0.16
USE1-206ENST00000595101 DAAM1Q9Y4D1 1078 aa16.05■□□□□ 0.16
USE1-206ENST00000595101 CEP83Q9Y592 693 aa16.05■□□□□ 0.16
USE1-206ENST00000595101 KMT2EQ8IZD2 1858 aa16.04■□□□□ 0.16
USE1-206ENST00000595101 AP5Z1O43299 807 aa16.04■□□□□ 0.16
USE1-206ENST00000595101 ADH5P11766 374 aa16.04■□□□□ 0.16
USE1-206ENST00000595101 GABRB2P47870 512 aa16.04■□□□□ 0.16
USE1-206ENST00000595101 GOLGA8FQ08AF8 430 aa16.04■□□□□ 0.16
USE1-206ENST00000595101 GOLGA8DPQ0D2H9 430 aa16.04■□□□□ 0.16
USE1-206ENST00000595101 ANO4Q32M45 955 aa16.04■□□□□ 0.16
USE1-206ENST00000595101 DCAF6Q58WW2 860 aa16.04■□□□□ 0.16
USE1-206ENST00000595101 PKN3Q6P5Z2 889 aa16.04■□□□□ 0.16
USE1-206ENST00000595101 TAC4Q86UU9 113 aa16.04■□□□□ 0.16
USE1-206ENST00000595101 ERICH1Q86X53 443 aa16.04■□□□□ 0.16
USE1-206ENST00000595101 XYLT1Q86Y38 959 aa16.04■□□□□ 0.16
USE1-206ENST00000595101 DNAAF5Q86Y56 855 aa16.04■□□□□ 0.16
USE1-206ENST00000595101 DEFB106AQ8N104 65 aa16.04■□□□□ 0.16
USE1-206ENST00000595101 KIAA1958Q8N8K9 716 aa16.04■□□□□ 0.16
USE1-206ENST00000595101 GOLGA1Q92805 767 aa16.04■□□□□ 0.16
USE1-206ENST00000595101 NOX5Q96PH1 765 aa16.04■□□□□ 0.16
USE1-206ENST00000595101 NELL2Q99435 816 aa16.04■□□□□ 0.16
USE1-206ENST00000595101 P2RY13Q9BPV8 354 aa16.04■□□□□ 0.16
USE1-206ENST00000595101 POPDC2Q9HBU9 364 aa16.04■□□□□ 0.16
USE1-206ENST00000595101 LSM7Q9UK45 103 aaKnown RBP16.04■□□□□ 0.16
USE1-206ENST00000595101 MUC6Q6W4X9 2439 aa16.04■□□□□ 0.16
USE1-206ENST00000595101 H0Y858 1186 aa16.03■□□□□ 0.16
USE1-206ENST00000595101 CAPN9O14815 690 aa16.03■□□□□ 0.16
USE1-206ENST00000595101 TFE3P19532 575 aaPredicted RBP16.03■□□□□ 0.16
USE1-206ENST00000595101 RNASE9P60153 205 aaKnown RBP16.03■□□□□ 0.16
USE1-206ENST00000595101 SLC6A3Q01959 620 aa16.03■□□□□ 0.16
USE1-206ENST00000595101 MTAPQ13126 283 aa16.03■□□□□ 0.16
USE1-206ENST00000595101 NR1H3Q13133 447 aa16.03■□□□□ 0.16
USE1-206ENST00000595101 MMS22LQ6ZRQ5 1243 aa16.03■□□□□ 0.16
USE1-206ENST00000595101 GAS2L3Q86XJ1 694 aa16.03■□□□□ 0.16
USE1-206ENST00000595101 ZNF677Q86XU0 584 aa16.03■□□□□ 0.16
USE1-206ENST00000595101 MAML2Q8IZL2 1156 aaPredicted RBP16.03■□□□□ 0.16
USE1-206ENST00000595101 CPLX3Q8WVH0 158 aa16.03■□□□□ 0.16
USE1-206ENST00000595101 OTUB2Q96DC9 234 aa16.03■□□□□ 0.16
USE1-206ENST00000595101 MYOFQ9NZM1 2061 aa16.03■□□□□ 0.16
USE1-206ENST00000595101 GOLGA6L7A0A1B0GV03 622 aa16.03■□□□□ 0.16
USE1-206ENST00000595101 NEDD8-MDP1E9PL57 170 aa16.03■□□□□ 0.16
USE1-206ENST00000595101 SART1O43290 800 aaKnown RBP16.03■□□□□ 0.16
USE1-206ENST00000595101 GALR2O43603 387 aaPredicted RBP16.03■□□□□ 0.16
USE1-206ENST00000595101 GJB6O95452 261 aa16.03■□□□□ 0.16
USE1-206ENST00000595101 LSM8O95777 96 aaKnown RBP16.03■□□□□ 0.16
USE1-206ENST00000595101 UNGP13051 313 aaPredicted RBP16.03■□□□□ 0.16
USE1-206ENST00000595101 TRNP1Q6NT89 227 aa16.03■□□□□ 0.16
USE1-206ENST00000595101 IPO4Q8TEX9 1081 aaKnown RBP16.03■□□□□ 0.16
USE1-206ENST00000595101 CD101Q93033 1021 aa16.03■□□□□ 0.16
USE1-206ENST00000595101 PLD4Q96BZ4 506 aa16.03■□□□□ 0.16
USE1-206ENST00000595101 C18orf8Q96DM3 657 aa16.03■□□□□ 0.16
USE1-206ENST00000595101 MSANTD3Q96H12 275 aa16.03■□□□□ 0.16
USE1-206ENST00000595101 SLC2A13Q96QE2 648 aa16.03■□□□□ 0.16
USE1-206ENST00000595101 AGPAT1Q99943 283 aa16.03■□□□□ 0.16
USE1-206ENST00000595101 SYT11Q9BT88 431 aa16.03■□□□□ 0.16
USE1-206ENST00000595101 SEPT11Q9NVA2 429 aaKnown RBP16.03■□□□□ 0.16
USE1-206ENST00000595101 TAS2R14Q9NYV8 317 aa16.03■□□□□ 0.16
USE1-206ENST00000595101 XPO7Q9UIA9 1087 aaKnown RBP16.03■□□□□ 0.16
USE1-206ENST00000595101 HBS1LQ9Y450 684 aaKnown RBP16.03■□□□□ 0.16
USE1-206ENST00000595101 SYNJ2BP-COX16A0A087WUM0 186 aa16.02■□□□□ 0.15
USE1-206ENST00000595101 GOLGA8SH3BPF8 625 aa16.02■□□□□ 0.15
USE1-206ENST00000595101 TSPAN3O60637 253 aa16.02■□□□□ 0.15
USE1-206ENST00000595101 ADH1CP00326 375 aa16.02■□□□□ 0.15
USE1-206ENST00000595101 IGLV3-27P01718 113 aa16.02■□□□□ 0.15
USE1-206ENST00000595101 SKILP12757 684 aa16.02■□□□□ 0.15
USE1-206ENST00000595101 TBX4P57082 545 aa16.02■□□□□ 0.15
USE1-206ENST00000595101 PTP4A2Q12974 167 aa16.02■□□□□ 0.15
USE1-206ENST00000595101 C1orf210Q8IVY1 113 aa16.02■□□□□ 0.15
USE1-206ENST00000595101 ETFBKMTQ8IXQ9 262 aa16.02■□□□□ 0.15
USE1-206ENST00000595101 MYEOVQ96EZ4 313 aa16.02■□□□□ 0.15
USE1-206ENST00000595101 FCRL2Q96LA5 508 aaPredicted RBP16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms