RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 TSSK4Q6SA08 328 aa12.04□□□□□ -0.48
VMP1-211ENST00000591315 TPGS1Q6ZTW0 290 aa12.04□□□□□ -0.48
VMP1-211ENST00000591315 RNF214Q8ND24 703 aa12.04□□□□□ -0.48
VMP1-211ENST00000591315 DQX1Q8TE96 717 aaKnown RBP12.04□□□□□ -0.48
VMP1-211ENST00000591315 RNF139Q8WU17 664 aa12.04□□□□□ -0.48
VMP1-211ENST00000591315 CPA5Q8WXQ8 436 aa12.04□□□□□ -0.48
VMP1-211ENST00000591315 BAP1Q92560 729 aa12.04□□□□□ -0.48
VMP1-211ENST00000591315 SPAG5Q96R06 1193 aa12.04□□□□□ -0.48
VMP1-211ENST00000591315 NELL2Q99435 816 aa12.04□□□□□ -0.48
VMP1-211ENST00000591315 P2RY13Q9BPV8 354 aa12.04□□□□□ -0.48
VMP1-211ENST00000591315 PDCL3Q9H2J4 239 aa12.04□□□□□ -0.48
VMP1-211ENST00000591315 CHRDQ9H2X0 955 aa12.04□□□□□ -0.48
VMP1-211ENST00000591315 ABCC13Q9NSE7 274 aa12.04□□□□□ -0.48
VMP1-211ENST00000591315 SPATA6Q9NWH7 488 aaPredicted RBP12.04□□□□□ -0.48
VMP1-211ENST00000591315 PLK2Q9NYY3 685 aa12.04□□□□□ -0.48
VMP1-211ENST00000591315 TBC1D14Q9P2M4 693 aa12.04□□□□□ -0.48
VMP1-211ENST00000591315 AGO1Q9UL18 857 aaKnown RBP12.04□□□□□ -0.48
VMP1-211ENST00000591315 PIEZO1Q92508 2521 aa12.04□□□□□ -0.48
VMP1-211ENST00000591315 FRYLO94915 3013 aa12.04□□□□□ -0.48
VMP1-211ENST00000591315 GOLGA6L7A0A1B0GV03 622 aa12.03□□□□□ -0.48
VMP1-211ENST00000591315 ADH5P11766 374 aa12.03□□□□□ -0.48
VMP1-211ENST00000591315 NCAM1P13591 858 aa12.03□□□□□ -0.48
VMP1-211ENST00000591315 CDH5P33151 784 aaPredicted RBP12.03□□□□□ -0.48
VMP1-211ENST00000591315 NOMO3P69849 1222 aa12.03□□□□□ -0.48
VMP1-211ENST00000591315 COG7P83436 770 aa12.03□□□□□ -0.48
VMP1-211ENST00000591315 CDR2Q01850 454 aa12.03□□□□□ -0.48
VMP1-211ENST00000591315 KDSRQ06136 332 aa12.03□□□□□ -0.48
VMP1-211ENST00000591315 ANGPT1Q15389 498 aa12.03□□□□□ -0.48
VMP1-211ENST00000591315 TRIP4Q15650 581 aaPredicted RBP12.03□□□□□ -0.48
VMP1-211ENST00000591315 ANO4Q32M45 955 aa12.03□□□□□ -0.48
VMP1-211ENST00000591315 TADA2BQ86TJ2 420 aa12.03□□□□□ -0.48
VMP1-211ENST00000591315 TAC4Q86UU9 113 aa12.03□□□□□ -0.48
VMP1-211ENST00000591315 SLC30A5Q8TAD4 765 aa12.03□□□□□ -0.48
VMP1-211ENST00000591315 OLIG1Q8TAK6 271 aa12.03□□□□□ -0.48
VMP1-211ENST00000591315 CD101Q93033 1021 aa12.03□□□□□ -0.48
VMP1-211ENST00000591315 MSANTD3Q96H12 275 aa12.03□□□□□ -0.48
VMP1-211ENST00000591315 ADAM33Q9BZ11 813 aa12.03□□□□□ -0.48
VMP1-211ENST00000591315 TSPY26PQ9H489 355 aa12.03□□□□□ -0.48
VMP1-211ENST00000591315 ZDHHC4Q9NPG8 344 aa12.03□□□□□ -0.48
VMP1-211ENST00000591315 SPHK2Q9NRA0 654 aa12.03□□□□□ -0.48
VMP1-211ENST00000591315 IFNKQ9P0W0 207 aa12.03□□□□□ -0.48
VMP1-211ENST00000591315 LSM7Q9UK45 103 aaKnown RBP12.03□□□□□ -0.48
VMP1-211ENST00000591315 STRIP2Q9ULQ0 834 aa12.03□□□□□ -0.48
VMP1-211ENST00000591315 CLEC4EQ9ULY5 219 aa12.03□□□□□ -0.48
VMP1-211ENST00000591315 MYO15AQ9UKN7 3530 aa12.02□□□□□ -0.48
VMP1-211ENST00000591315 TSPAN3O60637 253 aa12.02□□□□□ -0.49
VMP1-211ENST00000591315 GJB6O95452 261 aa12.02□□□□□ -0.49
VMP1-211ENST00000591315 ADH1CP00326 375 aa12.02□□□□□ -0.49
VMP1-211ENST00000591315 TFE3P19532 575 aaPredicted RBP12.02□□□□□ -0.49
VMP1-211ENST00000591315 PBX1P40424 430 aa12.02□□□□□ -0.49
VMP1-211ENST00000591315 RPS9P46781 194 aaKnown RBP12.02□□□□□ -0.49
VMP1-211ENST00000591315 SEC13P55735 322 aa12.02□□□□□ -0.49
VMP1-211ENST00000591315 SATB1Q01826 763 aa12.02□□□□□ -0.49
VMP1-211ENST00000591315 GOLGA8FQ08AF8 430 aa12.02□□□□□ -0.49
VMP1-211ENST00000591315 GOLGA8DPQ0D2H9 430 aa12.02□□□□□ -0.49
VMP1-211ENST00000591315 NR1H3Q13133 447 aa12.02□□□□□ -0.49
VMP1-211ENST00000591315 FILIP1LQ4L180 1135 aa12.02□□□□□ -0.49
VMP1-211ENST00000591315 EMC10Q5UCC4 262 aa12.02□□□□□ -0.49
VMP1-211ENST00000591315 LRSAM1Q6UWE0 723 aa12.02□□□□□ -0.49
VMP1-211ENST00000591315 OLFML1Q6UWY5 402 aa12.02□□□□□ -0.49
VMP1-211ENST00000591315 IRF2BP2Q7Z5L9 587 aa12.02□□□□□ -0.49
VMP1-211ENST00000591315 DNAAF5Q86Y56 855 aa12.02□□□□□ -0.49
VMP1-211ENST00000591315 C1orf210Q8IVY1 113 aa12.02□□□□□ -0.49
VMP1-211ENST00000591315 ETFBKMTQ8IXQ9 262 aa12.02□□□□□ -0.49
VMP1-211ENST00000591315 DEFB106AQ8N104 65 aa12.02□□□□□ -0.49
VMP1-211ENST00000591315 PHTF2Q8N3S3 785 aa12.02□□□□□ -0.49
VMP1-211ENST00000591315 KIAA1958Q8N8K9 716 aa12.02□□□□□ -0.49
VMP1-211ENST00000591315 TMEM35BQ8NCS4 154 aa12.02□□□□□ -0.49
VMP1-211ENST00000591315 MYEOVQ96EZ4 313 aa12.02□□□□□ -0.49
VMP1-211ENST00000591315 FCRL2Q96LA5 508 aaPredicted RBP12.02□□□□□ -0.49
VMP1-211ENST00000591315 CDK5RAP1Q96SZ6 601 aaKnown RBP12.02□□□□□ -0.49
VMP1-211ENST00000591315 OLA1Q9NTK5 396 aaKnown RBP12.02□□□□□ -0.49
VMP1-211ENST00000591315 XPO7Q9UIA9 1087 aaKnown RBP12.02□□□□□ -0.49
VMP1-211ENST00000591315 HBS1LQ9Y450 684 aaKnown RBP12.02□□□□□ -0.49
VMP1-211ENST00000591315 EP300Q09472 2414 aaPredicted RBP12.02□□□□□ -0.49
VMP1-211ENST00000591315 DMDP11532 3685 aa12.02□□□□□ -0.49
VMP1-211ENST00000591315 SYNJ2BP-COX16A0A087WUM0 186 aa12.01□□□□□ -0.49
VMP1-211ENST00000591315 LRRC53A6NM62 1247 aa12.01□□□□□ -0.49
VMP1-211ENST00000591315 NEDD8-MDP1E9PL57 170 aa12.01□□□□□ -0.49
VMP1-211ENST00000591315 GOLGA6L19H0YKK7 550 aa12.01□□□□□ -0.49
VMP1-211ENST00000591315 GOLGA8SH3BPF8 625 aa12.01□□□□□ -0.49
VMP1-211ENST00000591315 K7EQS6 105 aa12.01□□□□□ -0.49
VMP1-211ENST00000591315 NCAM2O15394 837 aa12.01□□□□□ -0.49
VMP1-211ENST00000591315 HOXC11O43248 304 aaPredicted RBP12.01□□□□□ -0.49
VMP1-211ENST00000591315 RNF40O75150 1001 aa12.01□□□□□ -0.49
VMP1-211ENST00000591315 TULP3O75386 442 aa12.01□□□□□ -0.49
VMP1-211ENST00000591315 IGLV3-27P01718 113 aa12.01□□□□□ -0.49
VMP1-211ENST00000591315 CYP1A1P04798 512 aaPredicted RBP12.01□□□□□ -0.49
VMP1-211ENST00000591315 CHRM1P11229 460 aaPredicted RBP12.01□□□□□ -0.49
VMP1-211ENST00000591315 TYRP14679 529 aa12.01□□□□□ -0.49
VMP1-211ENST00000591315 SGSHP51688 502 aa12.01□□□□□ -0.49
VMP1-211ENST00000591315 UBASH3AP57075 661 aa12.01□□□□□ -0.49
VMP1-211ENST00000591315 TBX4P57082 545 aa12.01□□□□□ -0.49
VMP1-211ENST00000591315 RNASE9P60153 205 aaKnown RBP12.01□□□□□ -0.49
VMP1-211ENST00000591315 YWHAZP63104 245 aaKnown RBP12.01□□□□□ -0.49
VMP1-211ENST00000591315 SLC6A3Q01959 620 aa12.01□□□□□ -0.49
VMP1-211ENST00000591315 NHLH1Q02575 133 aa12.01□□□□□ -0.49
VMP1-211ENST00000591315 GAD2Q05329 585 aa12.01□□□□□ -0.49
VMP1-211ENST00000591315 DMWDQ09019 674 aa12.01□□□□□ -0.49
VMP1-211ENST00000591315 GRSF1Q12849 480 aaKnown RBP eCLIP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms