RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 P2RY13Q9BPV8 354 aa12.43□□□□□ -0.42
LIG3-213ENST00000590630 POPDC2Q9HBU9 364 aa12.43□□□□□ -0.42
LIG3-213ENST00000590630 SPHK2Q9NRA0 654 aa12.43□□□□□ -0.42
LIG3-213ENST00000590630 ASNSD1Q9NWL6 643 aa12.43□□□□□ -0.42
LIG3-213ENST00000590630 CAPN9O14815 690 aa12.42□□□□□ -0.42
LIG3-213ENST00000590630 HOXC11O43248 304 aaPredicted RBP12.42□□□□□ -0.42
LIG3-213ENST00000590630 HSF2BPO75031 334 aa12.42□□□□□ -0.42
LIG3-213ENST00000590630 KLKB1P03952 638 aa12.42□□□□□ -0.42
LIG3-213ENST00000590630 ERBB2P04626 1255 aa12.42□□□□□ -0.42
LIG3-213ENST00000590630 FYNP06241 537 aa12.42□□□□□ -0.42
LIG3-213ENST00000590630 TPM3P06753 285 aa12.42□□□□□ -0.42
LIG3-213ENST00000590630 HMBSP08397 361 aa12.42□□□□□ -0.42
LIG3-213ENST00000590630 CHRNB1P11230 501 aa12.42□□□□□ -0.42
LIG3-213ENST00000590630 FERP16591 822 aa12.42□□□□□ -0.42
LIG3-213ENST00000590630 DRD1P21728 446 aa12.42□□□□□ -0.42
LIG3-213ENST00000590630 CORO1AP31146 461 aaKnown RBP12.42□□□□□ -0.42
LIG3-213ENST00000590630 CHKAP35790 457 aa12.42□□□□□ -0.42
LIG3-213ENST00000590630 EIF2DP41214 584 aaKnown RBP12.42□□□□□ -0.42
LIG3-213ENST00000590630 GABRB2P47870 512 aa12.42□□□□□ -0.42
LIG3-213ENST00000590630 HARS2P49590 506 aaKnown RBP12.42□□□□□ -0.42
LIG3-213ENST00000590630 ZNF445P59923 1031 aa12.42□□□□□ -0.42
LIG3-213ENST00000590630 NOMO3P69849 1222 aa12.42□□□□□ -0.42
LIG3-213ENST00000590630 FMO1Q01740 532 aa12.42□□□□□ -0.42
LIG3-213ENST00000590630 ARID5AQ03989 594 aa12.42□□□□□ -0.42
LIG3-213ENST00000590630 GAD2Q05329 585 aa12.42□□□□□ -0.42
LIG3-213ENST00000590630 NNTQ13423 1086 aa12.42□□□□□ -0.42
LIG3-213ENST00000590630 TRIP4Q15650 581 aaPredicted RBP12.42□□□□□ -0.42
LIG3-213ENST00000590630 GAB4Q2WGN9 574 aa12.42□□□□□ -0.42
LIG3-213ENST00000590630 FIGNQ5HY92 759 aa12.42□□□□□ -0.42
LIG3-213ENST00000590630 LY6G5CQ5SRR4 150 aa12.42□□□□□ -0.42
LIG3-213ENST00000590630 OLFML1Q6UWY5 402 aa12.42□□□□□ -0.42
LIG3-213ENST00000590630 SLC26A9Q7LBE3 791 aa12.42□□□□□ -0.42
LIG3-213ENST00000590630 ERICH1Q86X53 443 aa12.42□□□□□ -0.42
LIG3-213ENST00000590630 SLC20A1Q8WUM9 679 aa12.42□□□□□ -0.42
LIG3-213ENST00000590630 BAP1Q92560 729 aa12.42□□□□□ -0.42
LIG3-213ENST00000590630 SERPINB11Q96P15 392 aa12.42□□□□□ -0.42
LIG3-213ENST00000590630 EDEM3Q9BZQ6 932 aa12.42□□□□□ -0.42
LIG3-213ENST00000590630 CHRDQ9H2X0 955 aa12.42□□□□□ -0.42
LIG3-213ENST00000590630 LMAN1LQ9HAT1 526 aa12.42□□□□□ -0.42
LIG3-213ENST00000590630 TJP2Q9UDY2 1190 aa12.42□□□□□ -0.42
LIG3-213ENST00000590630 SFMBT1Q9UHJ3 866 aa12.42□□□□□ -0.42
LIG3-213ENST00000590630 MYO15AQ9UKN7 3530 aa12.41□□□□□ -0.42
LIG3-213ENST00000590630 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.41□□□□□ -0.42
LIG3-213ENST00000590630 MSI1O43347 362 aaKnown RBP12.41□□□□□ -0.42
LIG3-213ENST00000590630 LATS1O95835 1130 aa12.41□□□□□ -0.42
LIG3-213ENST00000590630 IGLV3-27P01718 113 aa12.41□□□□□ -0.42
LIG3-213ENST00000590630 CYP1A1P04798 512 aaPredicted RBP12.41□□□□□ -0.42
LIG3-213ENST00000590630 CHRNB2P17787 502 aa12.41□□□□□ -0.42
LIG3-213ENST00000590630 SCNN1AP37088 669 aa12.41□□□□□ -0.42
LIG3-213ENST00000590630 PBX1P40424 430 aa12.41□□□□□ -0.42
LIG3-213ENST00000590630 GALK1P51570 392 aa12.41□□□□□ -0.42
LIG3-213ENST00000590630 SLC6A3Q01959 620 aa12.41□□□□□ -0.42
LIG3-213ENST00000590630 RING1Q06587 406 aa12.41□□□□□ -0.42
LIG3-213ENST00000590630 FBXO43Q4G163 708 aa12.41□□□□□ -0.42
LIG3-213ENST00000590630 NAA35Q5VZE5 725 aa12.41□□□□□ -0.42
LIG3-213ENST00000590630 NUGGCQ68CJ6 796 aa12.41□□□□□ -0.42
LIG3-213ENST00000590630 OR6B2Q6IFH4 312 aa12.41□□□□□ -0.42
LIG3-213ENST00000590630 FSTL4Q6MZW2 842 aa12.41□□□□□ -0.42
LIG3-213ENST00000590630 FAM183BPQ6ZVS7 135 aa12.41□□□□□ -0.42
LIG3-213ENST00000590630 TMEM25Q86YD3 366 aa12.41□□□□□ -0.42
LIG3-213ENST00000590630 DENND1CQ8IV53 801 aa12.41□□□□□ -0.42
LIG3-213ENST00000590630 C1orf210Q8IVY1 113 aa12.41□□□□□ -0.42
LIG3-213ENST00000590630 UNC45BQ8IWX7 931 aa12.41□□□□□ -0.42
LIG3-213ENST00000590630 ZNF397Q8NF99 534 aaPredicted RBP12.41□□□□□ -0.42
LIG3-213ENST00000590630 DQX1Q8TE96 717 aaKnown RBP12.41□□□□□ -0.42
LIG3-213ENST00000590630 CD101Q93033 1021 aa12.41□□□□□ -0.42
LIG3-213ENST00000590630 C18orf8Q96DM3 657 aa12.41□□□□□ -0.42
LIG3-213ENST00000590630 IQCDQ96DY2 449 aa12.41□□□□□ -0.42
LIG3-213ENST00000590630 PIWIL1Q96J94 861 aaKnown RBP12.41□□□□□ -0.42
LIG3-213ENST00000590630 SLC2A13Q96QE2 648 aa12.41□□□□□ -0.42
LIG3-213ENST00000590630 NUP58Q9BVL2 599 aa12.41□□□□□ -0.42
LIG3-213ENST00000590630 TTYH3Q9C0H2 523 aa12.41□□□□□ -0.42
LIG3-213ENST00000590630 IRF2BPLQ9H1B7 796 aa12.41□□□□□ -0.42
LIG3-213ENST00000590630 MARK1Q9P0L2 795 aa12.41□□□□□ -0.42
LIG3-213ENST00000590630 IFNKQ9P0W0 207 aa12.41□□□□□ -0.42
LIG3-213ENST00000590630 WDR35Q9P2L0 1181 aa12.41□□□□□ -0.42
LIG3-213ENST00000590630 AGO1Q9UL18 857 aaKnown RBP12.41□□□□□ -0.42
LIG3-213ENST00000590630 NAALADL1Q9UQQ1 740 aa12.41□□□□□ -0.42
LIG3-213ENST00000590630 TLR6Q9Y2C9 796 aa12.41□□□□□ -0.42
LIG3-213ENST00000590630 MYO18AQ92614 2054 aaKnown RBP12.41□□□□□ -0.42
LIG3-213ENST00000590630 FRYLO94915 3013 aa12.4□□□□□ -0.42
LIG3-213ENST00000590630 LRRC53A6NM62 1247 aa12.4□□□□□ -0.42
LIG3-213ENST00000590630 OPRD1P41143 372 aa12.4□□□□□ -0.42
LIG3-213ENST00000590630 PTPN5P54829 565 aa12.4□□□□□ -0.42
LIG3-213ENST00000590630 TBX4P57082 545 aa12.4□□□□□ -0.42
LIG3-213ENST00000590630 TAF5Q15542 800 aa12.4□□□□□ -0.42
LIG3-213ENST00000590630 ANO4Q32M45 955 aa12.4□□□□□ -0.42
LIG3-213ENST00000590630 PREPLQ4J6C6 727 aaPredicted RBP12.4□□□□□ -0.42
LIG3-213ENST00000590630 DCAF6Q58WW2 860 aa12.4□□□□□ -0.42
LIG3-213ENST00000590630 SYPL2Q5VXT5 272 aa12.4□□□□□ -0.42
LIG3-213ENST00000590630 MAMSTRQ6ZN01 415 aa12.4□□□□□ -0.42
LIG3-213ENST00000590630 IRF2BP2Q7Z5L9 587 aa12.4□□□□□ -0.42
LIG3-213ENST00000590630 ETFBKMTQ8IXQ9 262 aa12.4□□□□□ -0.42
LIG3-213ENST00000590630 FAM217AQ8IXS0 508 aa12.4□□□□□ -0.42
LIG3-213ENST00000590630 CPXM2Q8N436 756 aa12.4□□□□□ -0.42
LIG3-213ENST00000590630 PRSS33Q8NF86 280 aa12.4□□□□□ -0.42
LIG3-213ENST00000590630 CCDC26Q8TAB7 109 aa12.4□□□□□ -0.42
LIG3-213ENST00000590630 CPA5Q8WXQ8 436 aa12.4□□□□□ -0.42
LIG3-213ENST00000590630 BBS2Q9BXC9 721 aa12.4□□□□□ -0.42
LIG3-213ENST00000590630 SPATA6Q9NWH7 488 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms