RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	HOXD11	P31277	338 aa	Predicted RBP	18.1	■□□□□ 0.49
MBD1-221	ENST00000589867	COG7	P83436	770 aa		18.1	■□□□□ 0.49
MBD1-221	ENST00000589867	AMPD2	Q01433	879 aa		18.1	■□□□□ 0.49
MBD1-221	ENST00000589867	PTK2	Q05397	1052 aa		18.1	■□□□□ 0.49
MBD1-221	ENST00000589867	DMWD	Q09019	674 aa		18.1	■□□□□ 0.49
MBD1-221	ENST00000589867	TAF5	Q15542	800 aa		18.1	■□□□□ 0.49
MBD1-221	ENST00000589867	ZNF528	Q3MIS6	628 aa		18.1	■□□□□ 0.49
MBD1-221	ENST00000589867	TADA2B	Q86TJ2	420 aa		18.1	■□□□□ 0.49
MBD1-221	ENST00000589867	FAM217A	Q8IXS0	508 aa		18.1	■□□□□ 0.49
MBD1-221	ENST00000589867	ERGIC2	Q96RQ1	377 aa		18.1	■□□□□ 0.49
MBD1-221	ENST00000589867	ST7	Q9NRC1	585 aa		18.1	■□□□□ 0.49
MBD1-221	ENST00000589867	FAM207A	Q9NSI2	230 aa	Predicted RBP	18.1	■□□□□ 0.49
MBD1-221	ENST00000589867	MARK1	Q9P0L2	795 aa		18.1	■□□□□ 0.49
MBD1-221	ENST00000589867	HCN2	Q9UL51	889 aa		18.1	■□□□□ 0.49
MBD1-221	ENST00000589867	CHURC1-FNTB	B4DL54	471 aa		18.09	■□□□□ 0.49
MBD1-221	ENST00000589867	TEX33	O43247	280 aa		18.09	■□□□□ 0.49
MBD1-221	ENST00000589867	IGLV3-27	P01718	113 aa		18.09	■□□□□ 0.49
MBD1-221	ENST00000589867	CORO1A	P31146	461 aa	Known RBP	18.09	■□□□□ 0.49
MBD1-221	ENST00000589867	CDH5	P33151	784 aa	Predicted RBP	18.09	■□□□□ 0.49
MBD1-221	ENST00000589867	EIF2D	P41214	584 aa	Known RBP	18.09	■□□□□ 0.49
MBD1-221	ENST00000589867	ACADSB	P45954	432 aa		18.09	■□□□□ 0.49
MBD1-221	ENST00000589867	ZNF165	P49910	485 aa		18.09	■□□□□ 0.49
MBD1-221	ENST00000589867	POLR2F	P61218	127 aa	Known RBP	18.09	■□□□□ 0.49
MBD1-221	ENST00000589867	GAD2	Q05329	585 aa		18.09	■□□□□ 0.49
MBD1-221	ENST00000589867	PTPN20	Q4JDL3	420 aa		18.09	■□□□□ 0.49
MBD1-221	ENST00000589867	SYPL2	Q5VXT5	272 aa		18.09	■□□□□ 0.49
MBD1-221	ENST00000589867	RSRC2	Q7L4I2	434 aa	Known RBP	18.09	■□□□□ 0.49
MBD1-221	ENST00000589867	NOP9	Q86U38	636 aa	Known RBP	18.09	■□□□□ 0.49
MBD1-221	ENST00000589867	NAT16	Q8N8M0	369 aa		18.09	■□□□□ 0.49
MBD1-221	ENST00000589867	ZBTB44	Q8NCP5	570 aa		18.09	■□□□□ 0.49
MBD1-221	ENST00000589867	C1orf131	Q8NDD1	294 aa	Known RBP	18.09	■□□□□ 0.49
MBD1-221	ENST00000589867	OLA1	Q9NTK5	396 aa	Known RBP	18.09	■□□□□ 0.49
MBD1-221	ENST00000589867	NAALADL1	Q9UQQ1	740 aa		18.09	■□□□□ 0.49
MBD1-221	ENST00000589867	ZNF292	O60281	2723 aa		18.09	■□□□□ 0.49
MBD1-221	ENST00000589867	TULP3	O75386	442 aa		18.08	■□□□□ 0.48
MBD1-221	ENST00000589867	ERBB2	P04626	1255 aa		18.08	■□□□□ 0.48
MBD1-221	ENST00000589867	CXCL12	P48061	93 aa		18.08	■□□□□ 0.48
MBD1-221	ENST00000589867	CCR3	P51677	355 aa		18.08	■□□□□ 0.48
MBD1-221	ENST00000589867	PITX1	P78337	314 aa	Predicted RBP	18.08	■□□□□ 0.48
MBD1-221	ENST00000589867	EIF4EBP2	Q13542	120 aa	Predicted RBP	18.08	■□□□□ 0.48
MBD1-221	ENST00000589867	TPGS1	Q6ZTW0	290 aa		18.08	■□□□□ 0.48
MBD1-221	ENST00000589867	DENND1C	Q8IV53	801 aa		18.08	■□□□□ 0.48
MBD1-221	ENST00000589867	EPS8L1	Q8TE68	723 aa		18.08	■□□□□ 0.48
MBD1-221	ENST00000589867	DQX1	Q8TE96	717 aa	Known RBP	18.08	■□□□□ 0.48
MBD1-221	ENST00000589867	PLD4	Q96BZ4	506 aa		18.08	■□□□□ 0.48
MBD1-221	ENST00000589867	NOCT	Q9UK39	431 aa	Known RBP	18.08	■□□□□ 0.48
MBD1-221	ENST00000589867	LSM7	Q9UK45	103 aa	Known RBP	18.08	■□□□□ 0.48
MBD1-221	ENST00000589867	FBXO10	Q9UK96	956 aa		18.08	■□□□□ 0.48
MBD1-221	ENST00000589867	STRIP2	Q9ULQ0	834 aa		18.08	■□□□□ 0.48
MBD1-221	ENST00000589867	HBS1L	Q9Y450	684 aa	Known RBP	18.08	■□□□□ 0.48
MBD1-221	ENST00000589867	EML5	Q05BV3	1969 aa		18.08	■□□□□ 0.48
MBD1-221	ENST00000589867	CACNG3	O60359	315 aa		18.07	■□□□□ 0.48
MBD1-221	ENST00000589867	LILRB5	O75023	590 aa		18.07	■□□□□ 0.48
MBD1-221	ENST00000589867	KAT7	O95251	611 aa		18.07	■□□□□ 0.48
MBD1-221	ENST00000589867	PENK	P01210	267 aa	Predicted RBP	18.07	■□□□□ 0.48
MBD1-221	ENST00000589867	CISD3	P0C7P0	127 aa		18.07	■□□□□ 0.48
MBD1-221	ENST00000589867	TYR	P14679	529 aa		18.07	■□□□□ 0.48
MBD1-221	ENST00000589867	CHRNB2	P17787	502 aa		18.07	■□□□□ 0.48
MBD1-221	ENST00000589867	MRE11	P49959	708 aa		18.07	■□□□□ 0.48
MBD1-221	ENST00000589867	UBXN1	Q04323	297 aa		18.07	■□□□□ 0.48
MBD1-221	ENST00000589867	GOLGA8F	Q08AF8	430 aa		18.07	■□□□□ 0.48
MBD1-221	ENST00000589867	GOLGA8DP	Q0D2H9	430 aa		18.07	■□□□□ 0.48
MBD1-221	ENST00000589867	FBXO43	Q4G163	708 aa		18.07	■□□□□ 0.48
MBD1-221	ENST00000589867	FKBP15	Q5T1M5	1219 aa		18.07	■□□□□ 0.48
MBD1-221	ENST00000589867	EMC10	Q5UCC4	262 aa		18.07	■□□□□ 0.48
MBD1-221	ENST00000589867	FYB2	Q5VWT5	728 aa		18.07	■□□□□ 0.48
MBD1-221	ENST00000589867	OLFML1	Q6UWY5	402 aa		18.07	■□□□□ 0.48
MBD1-221	ENST00000589867	BEND5	Q7L4P6	421 aa		18.07	■□□□□ 0.48
MBD1-221	ENST00000589867	ASCL5	Q7RTU5	278 aa		18.07	■□□□□ 0.48
MBD1-221	ENST00000589867	ALYREF	Q86V81	257 aa	Known RBP	18.07	■□□□□ 0.48
MBD1-221	ENST00000589867	USP33	Q8TEY7	942 aa		18.07	■□□□□ 0.48
MBD1-221	ENST00000589867	RNF139	Q8WU17	664 aa		18.07	■□□□□ 0.48
MBD1-221	ENST00000589867	SLC20A1	Q8WUM9	679 aa		18.07	■□□□□ 0.48
MBD1-221	ENST00000589867	PPP1R13B	Q96KQ4	1090 aa		18.07	■□□□□ 0.48
MBD1-221	ENST00000589867	NAP1L5	Q96NT1	182 aa	Predicted RBP	18.07	■□□□□ 0.48
MBD1-221	ENST00000589867	PNKP	Q96T60	521 aa		18.07	■□□□□ 0.48
MBD1-221	ENST00000589867	NAT10	Q9H0A0	1025 aa	Known RBP	18.07	■□□□□ 0.48
MBD1-221	ENST00000589867	CBX8	Q9HC52	389 aa		18.07	■□□□□ 0.48
MBD1-221	ENST00000589867	NLRC4	Q9NPP4	1024 aa		18.07	■□□□□ 0.48
MBD1-221	ENST00000589867	RTN4	Q9NQC3	1192 aa	Known RBP	18.07	■□□□□ 0.48
MBD1-221	ENST00000589867	STOML2	Q9UJZ1	356 aa		18.07	■□□□□ 0.48
MBD1-221	ENST00000589867	CLEC4E	Q9ULY5	219 aa		18.07	■□□□□ 0.48
MBD1-221	ENST00000589867	NEDD8-MDP1	E9PL57	170 aa		18.06	■□□□□ 0.48
MBD1-221	ENST00000589867	GFPT2	O94808	682 aa		18.06	■□□□□ 0.48
MBD1-221	ENST00000589867	IGLV3-25	P01717	112 aa		18.06	■□□□□ 0.48
MBD1-221	ENST00000589867	MME	P08473	750 aa		18.06	■□□□□ 0.48
MBD1-221	ENST00000589867	HNRNPL	P14866	589 aa	Known RBP eCLIP	18.06	■□□□□ 0.48
MBD1-221	ENST00000589867	CDK11B	P21127	795 aa	Known RBP	18.06	■□□□□ 0.48
MBD1-221	ENST00000589867	KIR2DL1	P43626	348 aa	Predicted RBP	18.06	■□□□□ 0.48
MBD1-221	ENST00000589867	BPIFB4	P59827	614 aa		18.06	■□□□□ 0.48
MBD1-221	ENST00000589867	KDSR	Q06136	332 aa		18.06	■□□□□ 0.48
MBD1-221	ENST00000589867	ANO4	Q32M45	955 aa		18.06	■□□□□ 0.48
MBD1-221	ENST00000589867	TAF3	Q5VWG9	929 aa		18.06	■□□□□ 0.48
MBD1-221	ENST00000589867	TOGARAM2	Q6ZUX3	1019 aa		18.06	■□□□□ 0.48
MBD1-221	ENST00000589867	FAM183BP	Q6ZVS7	135 aa		18.06	■□□□□ 0.48
MBD1-221	ENST00000589867	CPXM2	Q8N436	756 aa		18.06	■□□□□ 0.48
MBD1-221	ENST00000589867	RPLP0P6	Q8NHW5	317 aa		18.06	■□□□□ 0.48
MBD1-221	ENST00000589867	SLC39A13	Q96H72	371 aa		18.06	■□□□□ 0.48
MBD1-221	ENST00000589867	FCRL2	Q96LA5	508 aa	Predicted RBP	18.06	■□□□□ 0.48
MBD1-221	ENST00000589867	BBS2	Q9BXC9	721 aa		18.06	■□□□□ 0.48

Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms