RNA–Protein interactions for RNA: ENST00000587708.6

PSENEN-202, Transcript of presenilin enhancer, gamma-secretase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSENEN, Length 1,661 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSENEN-202ENST00000587708 UAP1Q16222 522 aaPredicted RBP18.18■□□□□ 0.5
PSENEN-202ENST00000587708 P3H1Q32P28 736 aa18.18■□□□□ 0.5
PSENEN-202ENST00000587708 DARS2Q6PI48 645 aaKnown RBP18.18■□□□□ 0.5
PSENEN-202ENST00000587708 PDZD4Q76G19 769 aaPredicted RBP18.18■□□□□ 0.5
PSENEN-202ENST00000587708 HOOK3Q86VS8 718 aa18.18■□□□□ 0.5
PSENEN-202ENST00000587708 MON1AQ86VX9 555 aa18.18■□□□□ 0.5
PSENEN-202ENST00000587708 CEP57Q86XR8 500 aa18.18■□□□□ 0.5
PSENEN-202ENST00000587708 CCDC185Q8N715 623 aa18.18■□□□□ 0.5
PSENEN-202ENST00000587708 RTP4Q96DX8 246 aa18.18■□□□□ 0.5
PSENEN-202ENST00000587708 CSPG4P5Q96PW8 444 aa18.18■□□□□ 0.5
PSENEN-202ENST00000587708 TTPALQ9BTX7 342 aa18.18■□□□□ 0.5
PSENEN-202ENST00000587708 GPATCH2LQ9NWQ4 482 aa18.18■□□□□ 0.5
PSENEN-202ENST00000587708 IL37Q9NZH6 218 aa18.18■□□□□ 0.5
PSENEN-202ENST00000587708 SHOC2Q9UQ13 582 aa18.18■□□□□ 0.5
PSENEN-202ENST00000587708 SCML2Q9UQR0 700 aa18.18■□□□□ 0.5
PSENEN-202ENST00000587708 PTPRDP23468 1912 aa18.18■□□□□ 0.5
PSENEN-202ENST00000587708 CENPFP49454 3210 aa18.17■□□□□ 0.5
PSENEN-202ENST00000587708 COL4A4P53420 1690 aaPredicted RBP18.17■□□□□ 0.5
PSENEN-202ENST00000587708 PCNTO95613 3336 aa18.17■□□□□ 0.5
PSENEN-202ENST00000587708 HACD1B0YJ81 288 aa18.17■□□□□ 0.5
PSENEN-202ENST00000587708 H0YGN5 161 aa18.17■□□□□ 0.5
PSENEN-202ENST00000587708 TIMP1P01033 207 aa18.17■□□□□ 0.5
PSENEN-202ENST00000587708 PECAM1P16284 738 aaPredicted RBP18.17■□□□□ 0.5
PSENEN-202ENST00000587708 SLC5A3P53794 718 aa18.17■□□□□ 0.5
PSENEN-202ENST00000587708 GPS1Q13098 491 aa18.17■□□□□ 0.5
PSENEN-202ENST00000587708 NME3Q13232 169 aa18.17■□□□□ 0.5
PSENEN-202ENST00000587708 NECAB2Q7Z6G3 386 aa18.17■□□□□ 0.5
PSENEN-202ENST00000587708 CDKL3Q8IVW4 592 aaPredicted RBP18.17■□□□□ 0.5
PSENEN-202ENST00000587708 ZCCHC9Q8N567 271 aaKnown RBP18.17■□□□□ 0.5
PSENEN-202ENST00000587708 TOP1MTQ969P6 601 aa18.17■□□□□ 0.5
PSENEN-202ENST00000587708 KCTD15Q96SI1 283 aaPredicted RBP18.17■□□□□ 0.5
PSENEN-202ENST00000587708 RHOBTB2Q9BYZ6 727 aa18.17■□□□□ 0.5
PSENEN-202ENST00000587708 WDCPQ9H6R7 721 aa18.17■□□□□ 0.5
PSENEN-202ENST00000587708 WDR6Q9NNW5 1121 aaKnown RBP18.17■□□□□ 0.5
PSENEN-202ENST00000587708 PIGVQ9NUD9 493 aa18.17■□□□□ 0.5
PSENEN-202ENST00000587708 DDIT4Q9NX09 232 aa18.17■□□□□ 0.5
PSENEN-202ENST00000587708 ABI2Q9NYB9 513 aaPredicted RBP18.17■□□□□ 0.5
PSENEN-202ENST00000587708 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.17■□□□□ 0.5
PSENEN-202ENST00000587708 CWC15Q9P013 229 aaKnown RBP18.17■□□□□ 0.5
PSENEN-202ENST00000587708 SAE1Q9UBE0 346 aaPredicted RBP18.17■□□□□ 0.5
PSENEN-202ENST00000587708 NFS1Q9Y697 457 aa18.17■□□□□ 0.5
PSENEN-202ENST00000587708 NLRC5Q86WI3 1866 aa18.17■□□□□ 0.5
PSENEN-202ENST00000587708 DNAH12Q6ZR08 3092 aa18.16■□□□□ 0.5
PSENEN-202ENST00000587708 KIAA0355O15063 1070 aa18.16■□□□□ 0.5
PSENEN-202ENST00000587708 RNF40O75150 1001 aa18.16■□□□□ 0.5
PSENEN-202ENST00000587708 RTN3O95197 1032 aaPredicted RBP18.16■□□□□ 0.5
PSENEN-202ENST00000587708 AMHP03971 560 aa18.16■□□□□ 0.5
PSENEN-202ENST00000587708 HTR7P34969 479 aa18.16■□□□□ 0.5
PSENEN-202ENST00000587708 PSEN1P49768 467 aa18.16■□□□□ 0.5
PSENEN-202ENST00000587708 ATXN1P54253 815 aaKnown RBP18.16■□□□□ 0.5
PSENEN-202ENST00000587708 YWHAGP61981 247 aaKnown RBP eCLIP18.16■□□□□ 0.5
PSENEN-202ENST00000587708 USP41Q3LFD5 358 aa18.16■□□□□ 0.5
PSENEN-202ENST00000587708 BRMS1LQ5PSV4 323 aa18.16■□□□□ 0.5
PSENEN-202ENST00000587708 BTBD8Q5XKL5 378 aa18.16■□□□□ 0.5
PSENEN-202ENST00000587708 DENND2CQ68D51 928 aa18.16■□□□□ 0.5
PSENEN-202ENST00000587708 SPATA17Q96L03 361 aa18.16■□□□□ 0.5
PSENEN-202ENST00000587708 FERMT1Q9BQL6 677 aa18.16■□□□□ 0.5
PSENEN-202ENST00000587708 FAM204AQ9H8W3 233 aa18.16■□□□□ 0.5
PSENEN-202ENST00000587708 CALCOCO1Q9P1Z2 691 aa18.16■□□□□ 0.5
PSENEN-202ENST00000587708 BACE2Q9Y5Z0 518 aa18.16■□□□□ 0.5
PSENEN-202ENST00000587708 PATJQ8NI35 1801 aa18.16■□□□□ 0.5
PSENEN-202ENST00000587708 H7C0C1 242 aa18.15■□□□□ 0.5
PSENEN-202ENST00000587708 EFEMP2O95967 443 aa18.15■□□□□ 0.5
PSENEN-202ENST00000587708 IFNB1P01574 187 aa18.15■□□□□ 0.5
PSENEN-202ENST00000587708 IGLV3-25P01717 112 aa18.15■□□□□ 0.5
PSENEN-202ENST00000587708 HSPA8P11142 646 aaKnown RBP18.15■□□□□ 0.5
PSENEN-202ENST00000587708 ATP5OP48047 213 aa18.15■□□□□ 0.5
PSENEN-202ENST00000587708 GATMP50440 423 aa18.15■□□□□ 0.5
PSENEN-202ENST00000587708 SCN4BQ8IWT1 228 aa18.15■□□□□ 0.5
PSENEN-202ENST00000587708 PPIL6Q8IXY8 311 aa18.15■□□□□ 0.5
PSENEN-202ENST00000587708 DNAJC5GQ8N7S2 189 aa18.15■□□□□ 0.5
PSENEN-202ENST00000587708 DIS3LQ8TF46 1054 aaKnown RBP18.15■□□□□ 0.5
PSENEN-202ENST00000587708 RNF139Q8WU17 664 aa18.15■□□□□ 0.5
PSENEN-202ENST00000587708 TMEM109Q9BVC6 243 aa18.15■□□□□ 0.5
PSENEN-202ENST00000587708 ADAM7Q9H2U9 754 aa18.15■□□□□ 0.5
PSENEN-202ENST00000587708 PAK5Q9P286 719 aa18.15■□□□□ 0.5
PSENEN-202ENST00000587708 STK39Q9UEW8 545 aa18.15■□□□□ 0.5
PSENEN-202ENST00000587708 TET1Q8NFU7 2136 aa18.15■□□□□ 0.5
PSENEN-202ENST00000587708 FAM92AA1XBS5 289 aa18.15■□□□□ 0.5
PSENEN-202ENST00000587708 MYZAPP0CAP1 466 aa18.15■□□□□ 0.5
PSENEN-202ENST00000587708 RPL10AP62906 217 aaKnown RBP18.15■□□□□ 0.5
PSENEN-202ENST00000587708 EIF4EBP2Q13542 120 aaPredicted RBP18.15■□□□□ 0.5
PSENEN-202ENST00000587708 C1orf228Q6PIY5 440 aa18.15■□□□□ 0.5
PSENEN-202ENST00000587708 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.15■□□□□ 0.58e-11■■■■■ 31.5
PSENEN-202ENST00000587708 TMEM199Q8N511 208 aa18.15■□□□□ 0.5
PSENEN-202ENST00000587708 PAWRQ96IZ0 340 aaKnown RBP18.15■□□□□ 0.5
PSENEN-202ENST00000587708 TMEM106CQ9BVX2 250 aa18.15■□□□□ 0.5
PSENEN-202ENST00000587708 FRMD8Q9BZ67 464 aaPredicted RBP18.15■□□□□ 0.5
PSENEN-202ENST00000587708 OSBPL2Q9H1P3 480 aa18.15■□□□□ 0.5
PSENEN-202ENST00000587708 HSFX1Q9UBD0 423 aa18.15■□□□□ 0.5
PSENEN-202ENST00000587708 HEY1Q9Y5J3 304 aa18.15■□□□□ 0.5
PSENEN-202ENST00000587708 SCN5AQ14524 2016 aa18.15■□□□□ 0.5
PSENEN-202ENST00000587708 MICAL3Q7RTP6 2002 aa18.15■□□□□ 0.5
PSENEN-202ENST00000587708 FNDC1Q4ZHG4 1894 aaPredicted RBP18.14■□□□□ 0.49
PSENEN-202ENST00000587708 HMGB1P1B2RPK0 211 aaPredicted RBP18.14■□□□□ 0.49
PSENEN-202ENST00000587708 EIF3HO15372 352 aaKnown RBP eCLIP18.14■□□□□ 0.49
PSENEN-202ENST00000587708 NCAM2O15394 837 aa18.14■□□□□ 0.49
PSENEN-202ENST00000587708 BAIAP3O94812 1187 aa18.14■□□□□ 0.49
PSENEN-202ENST00000587708 OR4Q2P0C623 313 aa18.14■□□□□ 0.49
PSENEN-202ENST00000587708 CPB1P15086 417 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms