RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 PSEN1P49768 467 aa15.23■□□□□ 0.03
SDF2-202ENST00000585428 ZNF132P52740 706 aa15.23■□□□□ 0.03
SDF2-202ENST00000585428 FOXD4L6Q3SYB3 417 aaPredicted RBP15.23■□□□□ 0.03
SDF2-202ENST00000585428 FOXD4L5Q5VV16 416 aaPredicted RBP15.23■□□□□ 0.03
SDF2-202ENST00000585428 FOXD4L3Q6VB84 417 aaPredicted RBP15.23■□□□□ 0.03
SDF2-202ENST00000585428 CCDC186Q7Z3E2 898 aa15.23■□□□□ 0.03
SDF2-202ENST00000585428 RAB44Q7Z6P3 723 aaPredicted RBP15.23■□□□□ 0.03
SDF2-202ENST00000585428 CHCHD4Q8N4Q1 142 aa15.23■□□□□ 0.03
SDF2-202ENST00000585428 FOXD4L4Q8WXT5 416 aaPredicted RBP15.23■□□□□ 0.03
SDF2-202ENST00000585428 DNASE2BQ8WZ79 361 aa15.23■□□□□ 0.03
SDF2-202ENST00000585428 FOXJ1Q92949 421 aa15.23■□□□□ 0.03
SDF2-202ENST00000585428 NT5C1AQ9BXI3 368 aa15.23■□□□□ 0.03
SDF2-202ENST00000585428 DUSP16Q9BY84 665 aa15.23■□□□□ 0.03
SDF2-202ENST00000585428 WSB2Q9NYS7 404 aaPredicted RBP15.23■□□□□ 0.03
SDF2-202ENST00000585428 PLK2Q9NYY3 685 aa15.23■□□□□ 0.03
SDF2-202ENST00000585428 CLIC5Q9NZA1 410 aa15.23■□□□□ 0.03
SDF2-202ENST00000585428 THAP10Q9P2Z0 257 aaPredicted RBP15.23■□□□□ 0.03
SDF2-202ENST00000585428 NFE2L3Q9Y4A8 694 aa15.23■□□□□ 0.03
SDF2-202ENST00000585428 STON1Q9Y6Q2 735 aa15.23■□□□□ 0.03
SDF2-202ENST00000585428 ASCC3Q8N3C0 2202 aaKnown RBP15.23■□□□□ 0.03
SDF2-202ENST00000585428 TNRC6BQ9UPQ9 1833 aaKnown RBP15.22■□□□□ 0.03
SDF2-202ENST00000585428 PLXND1Q9Y4D7 1925 aa15.22■□□□□ 0.03
SDF2-202ENST00000585428 SH3BP5O60239 455 aa15.22■□□□□ 0.03
SDF2-202ENST00000585428 NDUFS2O75306 463 aa15.22■□□□□ 0.03
SDF2-202ENST00000585428 CILPO75339 1184 aa15.22■□□□□ 0.03
SDF2-202ENST00000585428 CENPBP07199 599 aaPredicted RBP15.22■□□□□ 0.03
SDF2-202ENST00000585428 MAOBP27338 520 aa15.22■□□□□ 0.03
SDF2-202ENST00000585428 CD6P30203 668 aa15.22■□□□□ 0.03
SDF2-202ENST00000585428 CHKAP35790 457 aa15.22■□□□□ 0.03
SDF2-202ENST00000585428 VAMP7P51809 220 aa15.22■□□□□ 0.03
SDF2-202ENST00000585428 TRIP6Q15654 476 aaKnown RBP15.22■□□□□ 0.03
SDF2-202ENST00000585428 ZNF423Q2M1K9 1284 aa15.22■□□□□ 0.03
SDF2-202ENST00000585428 PLEKHG6Q3KR16 790 aa15.22■□□□□ 0.03
SDF2-202ENST00000585428 FUT11Q495W5 492 aa15.22■□□□□ 0.03
SDF2-202ENST00000585428 C10orf120Q5SQS8 335 aa15.22■□□□□ 0.03
SDF2-202ENST00000585428 SYCP2LQ5T4T6 812 aa15.22■□□□□ 0.03
SDF2-202ENST00000585428 FYB2Q5VWT5 728 aa15.22■□□□□ 0.03
SDF2-202ENST00000585428 LRSAM1Q6UWE0 723 aa15.22■□□□□ 0.03
SDF2-202ENST00000585428 SNX21Q969T3 373 aa15.22■□□□□ 0.03
SDF2-202ENST00000585428 CAMK1GQ96NX5 476 aa15.22■□□□□ 0.03
SDF2-202ENST00000585428 UBXN6Q9BZV1 441 aa15.22■□□□□ 0.03
SDF2-202ENST00000585428 MKRN2Q9H000 416 aaKnown RBP15.22■□□□□ 0.03
SDF2-202ENST00000585428 EXOC1Q9NV70 894 aa15.22■□□□□ 0.03
SDF2-202ENST00000585428 USP36Q9P275 1121 aaKnown RBP15.22■□□□□ 0.03
SDF2-202ENST00000585428 CFAP45Q9UL16 551 aa15.22■□□□□ 0.03
SDF2-202ENST00000585428 ZNF510Q9Y2H8 683 aa15.22■□□□□ 0.03
SDF2-202ENST00000585428 FRMD4BQ9Y2L6 1034 aa15.22■□□□□ 0.03
SDF2-202ENST00000585428 GON4LQ3T8J9 2241 aa15.21■□□□□ 0.03
SDF2-202ENST00000585428 MYO18AQ92614 2054 aaKnown RBP15.21■□□□□ 0.03
SDF2-202ENST00000585428 NPC1O15118 1278 aa15.21■□□□□ 0.03
SDF2-202ENST00000585428 CLSTN1O94985 981 aa15.21■□□□□ 0.03
SDF2-202ENST00000585428 F13A1P00488 732 aa15.21■□□□□ 0.03
SDF2-202ENST00000585428 TRIM21P19474 475 aaKnown RBP15.21■□□□□ 0.03
SDF2-202ENST00000585428 MFAP3P55082 362 aa15.21■□□□□ 0.03
SDF2-202ENST00000585428 COG7P83436 770 aa15.21■□□□□ 0.03
SDF2-202ENST00000585428 ENPEPQ07075 957 aa15.21■□□□□ 0.03
SDF2-202ENST00000585428 PPP3CAQ08209 521 aa15.21■□□□□ 0.03
SDF2-202ENST00000585428 NFIL3Q16649 462 aa15.21■□□□□ 0.03
SDF2-202ENST00000585428 WDR45BQ5MNZ6 344 aa15.21■□□□□ 0.03
SDF2-202ENST00000585428 PPP1R26Q5T8A7 1209 aaPredicted RBP15.21■□□□□ 0.03
SDF2-202ENST00000585428 CEP135Q66GS9 1140 aa15.21■□□□□ 0.03
SDF2-202ENST00000585428 TADA2BQ86TJ2 420 aa15.21■□□□□ 0.03
SDF2-202ENST00000585428 RGL4Q8IZJ4 473 aa15.21■□□□□ 0.03
SDF2-202ENST00000585428 RBBP8NLQ8NC74 664 aaPredicted RBP15.21■□□□□ 0.03
SDF2-202ENST00000585428 CADM4Q8NFZ8 388 aa15.21■□□□□ 0.03
SDF2-202ENST00000585428 TAS1R2Q8TE23 839 aa15.21■□□□□ 0.03
SDF2-202ENST00000585428 ZCCHC14Q8WYQ9 949 aaKnown RBP15.21■□□□□ 0.03
SDF2-202ENST00000585428 BHMTQ93088 406 aa15.21■□□□□ 0.03
SDF2-202ENST00000585428 PIWIL1Q96J94 861 aaKnown RBP15.21■□□□□ 0.03
SDF2-202ENST00000585428 PRDM16Q9HAZ2 1276 aa15.21■□□□□ 0.03
SDF2-202ENST00000585428 RTN4Q9NQC3 1192 aaKnown RBP15.21■□□□□ 0.03
SDF2-202ENST00000585428 SUSD2Q9UGT4 822 aa15.21■□□□□ 0.03
SDF2-202ENST00000585428 NAGPAQ9UK23 515 aa15.21■□□□□ 0.03
SDF2-202ENST00000585428 KCNJ18B7U540 433 aa15.2■□□□□ 0.02
SDF2-202ENST00000585428 CALUO43852 315 aaPredicted RBP15.2■□□□□ 0.02
SDF2-202ENST00000585428 MYL1P05976 194 aa15.2■□□□□ 0.02
SDF2-202ENST00000585428 RALAP11233 206 aa15.2■□□□□ 0.02
SDF2-202ENST00000585428 HOXB3P14651 431 aaPredicted RBP15.2■□□□□ 0.02
SDF2-202ENST00000585428 GNSP15586 552 aa15.2■□□□□ 0.02
SDF2-202ENST00000585428 CMA1P23946 247 aa15.2■□□□□ 0.02
SDF2-202ENST00000585428 PIK3CAP42336 1068 aa15.2■□□□□ 0.02
SDF2-202ENST00000585428 GCLMP48507 274 aa15.2■□□□□ 0.02
SDF2-202ENST00000585428 RING1Q06587 406 aa15.2■□□□□ 0.02
SDF2-202ENST00000585428 GEN1Q17RS7 908 aa15.2■□□□□ 0.02
SDF2-202ENST00000585428 JAKMIP2Q96AA8 810 aa15.2■□□□□ 0.02
SDF2-202ENST00000585428 TOE1Q96GM8 510 aaKnown RBP15.2■□□□□ 0.02
SDF2-202ENST00000585428 FAXDC2Q96IV6 333 aa15.2■□□□□ 0.02
SDF2-202ENST00000585428 ZDHHC5Q9C0B5 715 aa15.2■□□□□ 0.02
SDF2-202ENST00000585428 AGO1Q9UL18 857 aaKnown RBP15.2■□□□□ 0.02
SDF2-202ENST00000585428 FREM2Q5SZK8 3169 aa15.2■□□□□ 0.02
SDF2-202ENST00000585428 PCDH15Q96QU1 1955 aa15.19■□□□□ 0.02
SDF2-202ENST00000585428 METTL12A8MUP2 240 aa15.19■□□□□ 0.02
SDF2-202ENST00000585428 CBFA2T3O75081 653 aa15.19■□□□□ 0.02
SDF2-202ENST00000585428 IGLV3-19P01714 112 aa15.19■□□□□ 0.02
SDF2-202ENST00000585428 C7P10643 843 aa15.19■□□□□ 0.02
SDF2-202ENST00000585428 IL12RB1P42701 662 aa15.19■□□□□ 0.02
SDF2-202ENST00000585428 TPMTP51580 245 aa15.19■□□□□ 0.02
SDF2-202ENST00000585428 DNM1Q05193 864 aaKnown RBP15.19■□□□□ 0.02
SDF2-202ENST00000585428 RAB41Q5JT25 222 aa15.19■□□□□ 0.02
SDF2-202ENST00000585428 KIAA1324Q6UXG2 1013 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms