RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 ZACNQ401N2 412 aa16.5■□□□□ 0.23
SKA2-209ENST00000583976 HSF5Q4G112 596 aaPredicted RBP16.5■□□□□ 0.23
SKA2-209ENST00000583976 LYSMD4Q5XG99 296 aa16.5■□□□□ 0.23
SKA2-209ENST00000583976 TOGARAM2Q6ZUX3 1019 aa16.5■□□□□ 0.23
SKA2-209ENST00000583976 BHMTQ93088 406 aa16.5■□□□□ 0.23
SKA2-209ENST00000583976 NMUR1Q9HB89 426 aa16.5■□□□□ 0.23
SKA2-209ENST00000583976 SAMSN1Q9NSI8 373 aaKnown RBP16.5■□□□□ 0.23
SKA2-209ENST00000583976 DNAJC17Q9NVM6 304 aaKnown RBP16.5■□□□□ 0.23
SKA2-209ENST00000583976 DEC1Q9P2X7 70 aa16.5■□□□□ 0.23
SKA2-209ENST00000583976 NUDT5Q9UKK9 219 aa16.5■□□□□ 0.23
SKA2-209ENST00000583976 NEDD8-MDP1E9PL57 170 aa16.49■□□□□ 0.23
SKA2-209ENST00000583976 STX10O60499 249 aa16.49■□□□□ 0.23
SKA2-209ENST00000583976 HLA-DRAP01903 254 aa16.49■□□□□ 0.23
SKA2-209ENST00000583976 ENGP17813 658 aa16.49■□□□□ 0.23
SKA2-209ENST00000583976 TNFRSF4P43489 277 aa16.49■□□□□ 0.23
SKA2-209ENST00000583976 ENPEPQ07075 957 aa16.49■□□□□ 0.23
SKA2-209ENST00000583976 CBWD6Q4V339 395 aa16.49■□□□□ 0.23
SKA2-209ENST00000583976 CBWD3Q5JTY5 395 aa16.49■□□□□ 0.23
SKA2-209ENST00000583976 CBWD5Q5RIA9 395 aa16.49■□□□□ 0.23
SKA2-209ENST00000583976 BTBD8Q5XKL5 378 aa16.49■□□□□ 0.23
SKA2-209ENST00000583976 KRT39Q6A163 491 aa16.49■□□□□ 0.23
SKA2-209ENST00000583976 UNQ6494/PRO21346Q6UXR6 183 aa16.49■□□□□ 0.23
SKA2-209ENST00000583976 CLEC20AQ6ZU45 233 aa16.49■□□□□ 0.23
SKA2-209ENST00000583976 IRF2BP1Q8IU81 584 aa16.49■□□□□ 0.23
SKA2-209ENST00000583976 ENOX1Q8TC92 643 aaKnown RBP16.49■□□□□ 0.23
SKA2-209ENST00000583976 TAS1R2Q8TE23 839 aa16.49■□□□□ 0.23
SKA2-209ENST00000583976 SLC35C1Q96A29 364 aa16.49■□□□□ 0.23
SKA2-209ENST00000583976 OTUB2Q96DC9 234 aa16.49■□□□□ 0.23
SKA2-209ENST00000583976 TMEM121BQ9BXQ6 578 aaPredicted RBP16.49■□□□□ 0.23
SKA2-209ENST00000583976 SLC6A17Q9H1V8 727 aa16.49■□□□□ 0.23
SKA2-209ENST00000583976 APOBEC3GQ9HC16 384 aaKnown RBP16.49■□□□□ 0.23
SKA2-209ENST00000583976 TMEM8AQ9HCN3 771 aa16.49■□□□□ 0.23
SKA2-209ENST00000583976 EVLQ9UI08 416 aaPredicted RBP16.49■□□□□ 0.23
SKA2-209ENST00000583976 NFE2L3Q9Y4A8 694 aa16.49■□□□□ 0.23
SKA2-209ENST00000583976 RAD54BQ9Y620 910 aa16.49■□□□□ 0.23
SKA2-209ENST00000583976 FREM2Q5SZK8 3169 aa16.48■□□□□ 0.23
SKA2-209ENST00000583976 A0A0A0MRY4 1105 aa16.48■□□□□ 0.23
SKA2-209ENST00000583976 A0A1W2PQF6 199 aa16.48■□□□□ 0.23
SKA2-209ENST00000583976 HHLA1C9JL84 531 aa16.48■□□□□ 0.23
SKA2-209ENST00000583976 MAP3K13O43283 966 aa16.48■□□□□ 0.23
SKA2-209ENST00000583976 ASS1P00966 412 aaKnown RBP16.48■□□□□ 0.23
SKA2-209ENST00000583976 CFIP05156 583 aa16.48■□□□□ 0.23
SKA2-209ENST00000583976 NDUFV2P19404 249 aa16.48■□□□□ 0.23
SKA2-209ENST00000583976 GTF2H1P32780 548 aa16.48■□□□□ 0.23
SKA2-209ENST00000583976 MXI1P50539 228 aa16.48■□□□□ 0.23
SKA2-209ENST00000583976 RPL6Q02878 288 aaKnown RBP16.48■□□□□ 0.23
SKA2-209ENST00000583976 GRAMD4Q6IC98 578 aa16.48■□□□□ 0.23
SKA2-209ENST00000583976 TPGS1Q6ZTW0 290 aa16.48■□□□□ 0.23
SKA2-209ENST00000583976 SYT12Q8IV01 421 aa16.48■□□□□ 0.23
SKA2-209ENST00000583976 TRIM59Q8IWR1 403 aa16.48■□□□□ 0.23
SKA2-209ENST00000583976 OR2I1PQ8NGU4 316 aa16.48■□□□□ 0.23
SKA2-209ENST00000583976 FUCA2Q9BTY2 467 aa16.48■□□□□ 0.23
SKA2-209ENST00000583976 KLF16Q9BXK1 252 aaPredicted RBP16.48■□□□□ 0.23
SKA2-209ENST00000583976 THAP9Q9H5L6 903 aa16.48■□□□□ 0.23
SKA2-209ENST00000583976 CSNK1G1Q9HCP0 422 aa16.48■□□□□ 0.23
SKA2-209ENST00000583976 CD248Q9HCU0 757 aa16.48■□□□□ 0.23
SKA2-209ENST00000583976 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.48■□□□□ 0.23
SKA2-209ENST00000583976 A0A1W2PQH9 124 aa16.47■□□□□ 0.23
SKA2-209ENST00000583976 PRRT4C9JH25 899 aa16.47■□□□□ 0.23
SKA2-209ENST00000583976 CACNG3O60359 315 aa16.47■□□□□ 0.23
SKA2-209ENST00000583976 PROS1P07225 676 aa16.47■□□□□ 0.23
SKA2-209ENST00000583976 FAM200BP0CF97 657 aa16.47■□□□□ 0.23
SKA2-209ENST00000583976 TYRP14679 529 aa16.47■□□□□ 0.23
SKA2-209ENST00000583976 MTIF2P46199 727 aaKnown RBP16.47■□□□□ 0.23
SKA2-209ENST00000583976 MARSP56192 900 aaKnown RBP16.47■□□□□ 0.23
SKA2-209ENST00000583976 MCCD1P59942 119 aaPredicted RBP16.47■□□□□ 0.23
SKA2-209ENST00000583976 KCNH2Q12809 1159 aa16.47■□□□□ 0.23
SKA2-209ENST00000583976 PEAR1Q5VY43 1037 aaPredicted RBP16.47■□□□□ 0.23
SKA2-209ENST00000583976 AOPEPQ8N6M6 819 aa16.47■□□□□ 0.23
SKA2-209ENST00000583976 BBS2Q9BXC9 721 aa16.47■□□□□ 0.23
SKA2-209ENST00000583976 ADAM33Q9BZ11 813 aa16.47■□□□□ 0.23
SKA2-209ENST00000583976 NAT10Q9H0A0 1025 aaKnown RBP16.47■□□□□ 0.23
SKA2-209ENST00000583976 CYLDQ9NQC7 956 aa16.47■□□□□ 0.23
SKA2-209ENST00000583976 FANCLQ9NW38 375 aa16.47■□□□□ 0.23
SKA2-209ENST00000583976 CACNA2D2Q9NY47 1150 aa16.47■□□□□ 0.23
SKA2-209ENST00000583976 PILRBQ9UKJ0 227 aa16.47■□□□□ 0.23
SKA2-209ENST00000583976 ZFYVE26Q68DK2 2539 aa16.46■□□□□ 0.23
SKA2-209ENST00000583976 IGHV1OR15-9A0A0B4J2B8 117 aa16.46■□□□□ 0.23
SKA2-209ENST00000583976 SPAARA0A1B0GVQ0 90 aa16.46■□□□□ 0.23
SKA2-209ENST00000583976 CD58P19256 250 aa16.46■□□□□ 0.23
SKA2-209ENST00000583976 CSRP1P21291 193 aaKnown RBP16.46■□□□□ 0.23
SKA2-209ENST00000583976 FMO5P49326 533 aa16.46■□□□□ 0.23
SKA2-209ENST00000583976 MYL5Q02045 173 aa16.46■□□□□ 0.23
SKA2-209ENST00000583976 INCA1Q0VD86 236 aa16.46■□□□□ 0.23
SKA2-209ENST00000583976 SGSM1Q2NKQ1 1148 aa16.46■□□□□ 0.23
SKA2-209ENST00000583976 SLC41A1Q8IVJ1 513 aa16.46■□□□□ 0.23
SKA2-209ENST00000583976 FAM114A1Q8IWE2 563 aa16.46■□□□□ 0.23
SKA2-209ENST00000583976 CHPFQ8IZ52 775 aa16.46■□□□□ 0.23
SKA2-209ENST00000583976 FBXL13Q8NEE6 735 aa16.46■□□□□ 0.23
SKA2-209ENST00000583976 SEMA4DQ92854 862 aa16.46■□□□□ 0.23
SKA2-209ENST00000583976 GTPBP2Q9BX10 602 aaKnown RBP16.46■□□□□ 0.23
SKA2-209ENST00000583976 NUSAP1Q9BXS6 441 aaKnown RBP16.46■□□□□ 0.23
SKA2-209ENST00000583976 TLR8Q9NR97 1041 aaKnown RBP16.46■□□□□ 0.23
SKA2-209ENST00000583976 RAB20Q9NX57 234 aa16.46■□□□□ 0.23
SKA2-209ENST00000583976 PLK2Q9NYY3 685 aa16.46■□□□□ 0.23
SKA2-209ENST00000583976 CYP8B1Q9UNU6 501 aa16.46■□□□□ 0.23
SKA2-209ENST00000583976 KCNJ18B7U540 433 aa16.45■□□□□ 0.22
SKA2-209ENST00000583976 AFPP02771 609 aaKnown RBP16.45■□□□□ 0.22
SKA2-209ENST00000583976 P4HA1P13674 534 aa16.45■□□□□ 0.22
SKA2-209ENST00000583976 CEACAM1P13688 526 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms