RNA–Protein interactions for RNA: ENST00000582923.1

PDLIM1P2-201, Transcript of PDZ and LIM domain 1 pseudogene 2, humanhuman

BASIC

Gene PDLIM1P2, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P2-201ENST00000582923 KIF5CO60282 957 aa9.48□□□□□ -0.89
PDLIM1P2-201ENST00000582923 BUB1BO60566 1050 aaPredicted RBP9.48□□□□□ -0.89
PDLIM1P2-201ENST00000582923 PROSCO94903 275 aa9.48□□□□□ -0.89
PDLIM1P2-201ENST00000582923 TBX18O95935 607 aa9.48□□□□□ -0.89
PDLIM1P2-201ENST00000582923 HMBSP08397 361 aa9.48□□□□□ -0.89
PDLIM1P2-201ENST00000582923 IRF1P10914 325 aa9.48□□□□□ -0.89
PDLIM1P2-201ENST00000582923 HDCP19113 662 aa9.48□□□□□ -0.89
PDLIM1P2-201ENST00000582923 GBP2P32456 591 aaPredicted RBP9.48□□□□□ -0.89
PDLIM1P2-201ENST00000582923 MAN1A1P33908 653 aa9.48□□□□□ -0.89
PDLIM1P2-201ENST00000582923 RDXP35241 583 aaKnown RBP9.48□□□□□ -0.89
PDLIM1P2-201ENST00000582923 GJC1P36383 396 aa9.48□□□□□ -0.89
PDLIM1P2-201ENST00000582923 HADHBP55084 474 aaKnown RBP9.48□□□□□ -0.89
PDLIM1P2-201ENST00000582923 PITX1P78337 314 aaPredicted RBP9.48□□□□□ -0.89
PDLIM1P2-201ENST00000582923 DEUP1Q05D60 604 aa9.48□□□□□ -0.89
PDLIM1P2-201ENST00000582923 ZNF252P-AS1Q0IIN9 211 aa9.48□□□□□ -0.89
PDLIM1P2-201ENST00000582923 SMAD4Q13485 552 aaKnown RBP9.48□□□□□ -0.89
PDLIM1P2-201ENST00000582923 PIGHQ14442 188 aaPredicted RBP9.48□□□□□ -0.89
PDLIM1P2-201ENST00000582923 CBX2Q14781 532 aaPredicted RBP9.48□□□□□ -0.89
PDLIM1P2-201ENST00000582923 CCDC14Q49A88 953 aa9.48□□□□□ -0.89
PDLIM1P2-201ENST00000582923 OTUD1Q5VV17 481 aaPredicted RBP9.48□□□□□ -0.89
PDLIM1P2-201ENST00000582923 C11orf63Q6NUN7 778 aa9.48□□□□□ -0.89
PDLIM1P2-201ENST00000582923 KLHDC10Q6PID8 442 aa9.48□□□□□ -0.89
PDLIM1P2-201ENST00000582923 ZNF662Q6ZS27 426 aa9.48□□□□□ -0.89
PDLIM1P2-201ENST00000582923 DAAM2Q86T65 1068 aa9.48□□□□□ -0.89
PDLIM1P2-201ENST00000582923 REXO1L1PQ8IX06 675 aa9.48□□□□□ -0.89
PDLIM1P2-201ENST00000582923 RNF10Q8N5U6 811 aaKnown RBP9.48□□□□□ -0.89
PDLIM1P2-201ENST00000582923 TPCN2Q8NHX9 752 aa9.48□□□□□ -0.89
PDLIM1P2-201ENST00000582923 KIAA1524Q8TCG1 905 aa9.48□□□□□ -0.89
PDLIM1P2-201ENST00000582923 NPY6RQ99463 290 aa9.48□□□□□ -0.89
PDLIM1P2-201ENST00000582923 S1PR5Q9H228 398 aa9.48□□□□□ -0.89
PDLIM1P2-201ENST00000582923 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.48□□□□□ -0.89
PDLIM1P2-201ENST00000582923 SFMBT1Q9UHJ3 866 aa9.48□□□□□ -0.89
PDLIM1P2-201ENST00000582923 SALL4Q9UJQ4 1053 aa9.48□□□□□ -0.89
PDLIM1P2-201ENST00000582923 CPQQ9Y646 472 aa9.48□□□□□ -0.89
PDLIM1P2-201ENST00000582923 CAPN6Q9Y6Q1 641 aa9.48□□□□□ -0.89
PDLIM1P2-201ENST00000582923 HELZP42694 1942 aaKnown RBP9.48□□□□□ -0.89
PDLIM1P2-201ENST00000582923 DENND4CQ5VZ89 1909 aa9.47□□□□□ -0.89
PDLIM1P2-201ENST00000582923 GRID2IPA4D2P6 1211 aa9.47□□□□□ -0.89
PDLIM1P2-201ENST00000582923 SOBPA7XYQ1 873 aa9.47□□□□□ -0.89
PDLIM1P2-201ENST00000582923 NRG2O14511 850 aaPredicted RBP9.47□□□□□ -0.89
PDLIM1P2-201ENST00000582923 IRAK2O43187 625 aa9.47□□□□□ -0.89
PDLIM1P2-201ENST00000582923 MOSPD3O75425 235 aa9.47□□□□□ -0.89
PDLIM1P2-201ENST00000582923 PALMO75781 387 aa9.47□□□□□ -0.89
PDLIM1P2-201ENST00000582923 OLFM2O95897 454 aa9.47□□□□□ -0.89
PDLIM1P2-201ENST00000582923 MOCS2O96007 188 aaPredicted RBP9.47□□□□□ -0.89
PDLIM1P2-201ENST00000582923 F9P00740 461 aa9.47□□□□□ -0.89
PDLIM1P2-201ENST00000582923 APOEP02649 317 aa9.47□□□□□ -0.89
PDLIM1P2-201ENST00000582923 TNNT1P13805 278 aa9.47□□□□□ -0.89
PDLIM1P2-201ENST00000582923 PFKLP17858 780 aa9.47□□□□□ -0.89
PDLIM1P2-201ENST00000582923 TFE3P19532 575 aaPredicted RBP9.47□□□□□ -0.89
PDLIM1P2-201ENST00000582923 MSNP26038 577 aaKnown RBP9.47□□□□□ -0.89
PDLIM1P2-201ENST00000582923 KPNA1P52294 538 aaPredicted RBP9.47□□□□□ -0.89
PDLIM1P2-201ENST00000582923 TBX4P57082 545 aa9.47□□□□□ -0.89
PDLIM1P2-201ENST00000582923 TRIP4Q15650 581 aaPredicted RBP9.47□□□□□ -0.89
PDLIM1P2-201ENST00000582923 SCYL2Q6P3W7 929 aa9.47□□□□□ -0.89
PDLIM1P2-201ENST00000582923 STRADAQ7RTN6 431 aa9.47□□□□□ -0.89
PDLIM1P2-201ENST00000582923 FAM131BQ86XD5 332 aa9.47□□□□□ -0.89
PDLIM1P2-201ENST00000582923 NPAS3Q8IXF0 933 aa9.47□□□□□ -0.89
PDLIM1P2-201ENST00000582923 CMTM8Q8IZV2 173 aa9.47□□□□□ -0.89
PDLIM1P2-201ENST00000582923 SYCE1Q8N0S2 351 aa9.47□□□□□ -0.89
PDLIM1P2-201ENST00000582923 ZNF276Q8N554 614 aa9.47□□□□□ -0.89
PDLIM1P2-201ENST00000582923 NIPA2Q8N8Q9 360 aa9.47□□□□□ -0.89
PDLIM1P2-201ENST00000582923 ZSCAN18Q8TBC5 510 aaPredicted RBP9.47□□□□□ -0.89
PDLIM1P2-201ENST00000582923 FGF13Q92913 245 aa9.47□□□□□ -0.89
PDLIM1P2-201ENST00000582923 SLC22A12Q96S37 553 aa9.47□□□□□ -0.89
PDLIM1P2-201ENST00000582923 CYP2S1Q96SQ9 504 aa9.47□□□□□ -0.89
PDLIM1P2-201ENST00000582923 NCAPGQ9BPX3 1015 aa9.47□□□□□ -0.89
PDLIM1P2-201ENST00000582923 SLC46A2Q9BY10 475 aa9.47□□□□□ -0.89
PDLIM1P2-201ENST00000582923 SMG9Q9H0W8 520 aaKnown RBP9.47□□□□□ -0.89
PDLIM1P2-201ENST00000582923 GOLPH3Q9H4A6 298 aa9.47□□□□□ -0.89
PDLIM1P2-201ENST00000582923 POMKQ9H5K3 350 aa9.47□□□□□ -0.89
PDLIM1P2-201ENST00000582923 PIGVQ9NUD9 493 aa9.47□□□□□ -0.89
PDLIM1P2-201ENST00000582923 CDH7Q9ULB5 785 aa9.47□□□□□ -0.89
PDLIM1P2-201ENST00000582923 HBS1LQ9Y450 684 aaKnown RBP9.47□□□□□ -0.89
PDLIM1P2-201ENST00000582923 HYOU1Q9Y4L1 999 aa9.47□□□□□ -0.89
PDLIM1P2-201ENST00000582923 NUP210Q8TEM1 1887 aaPredicted RBP9.47□□□□□ -0.89
PDLIM1P2-201ENST00000582923 ANAPC1Q9H1A4 1944 aa9.46□□□□□ -0.89
PDLIM1P2-201ENST00000582923 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 GRXCR2A6NFK2 248 aa9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 PRPSAP2O60256 369 aa9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 LRCH4O75427 683 aa9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 PRAMEF12O95522 483 aa9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 FTCDO95954 541 aa9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 IGLV3-25P01717 112 aa9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 SLC2A3P11169 496 aa9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 COMTP21964 271 aa9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 SP100P23497 879 aaPredicted RBP9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 CCR1P32246 355 aa9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 HDAC4P56524 1084 aa9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 SLC7A9P82251 487 aa9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 COG7P83436 770 aa9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 NNTQ13423 1086 aa9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 ACAP1Q15027 740 aa9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 HADHQ16836 314 aaKnown RBP9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 ARL13BQ3SXY8 428 aa9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 RAB6CQ53S08 254 aa9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 ZC3H12AQ5D1E8 599 aaKnown RBP9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 ZFYVE27Q5T4F4 411 aa9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 SH3PXD2AQ5TCZ1 1133 aa9.46□□□□□ -0.9
PDLIM1P2-201ENST00000582923 DAB2IPQ5VWQ8 1189 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms