RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 CRACR2AQ9BSW2 395 aa16.23■□□□□ 0.19
SF3B3-215ENST00000577085 ZDHHC4Q9NPG8 344 aa16.23■□□□□ 0.19
SF3B3-215ENST00000577085 ST7Q9NRC1 585 aa16.23■□□□□ 0.19
SF3B3-215ENST00000577085 SEMA4GQ9NTN9 838 aa16.23■□□□□ 0.19
SF3B3-215ENST00000577085 PLK2Q9NYY3 685 aa16.23■□□□□ 0.19
SF3B3-215ENST00000577085 AGO1Q9UL18 857 aaKnown RBP16.23■□□□□ 0.19
SF3B3-215ENST00000577085 FAM186AA6NE01 2351 aa16.23■□□□□ 0.19
SF3B3-215ENST00000577085 RIF1Q5UIP0 2472 aaKnown RBP16.22■□□□□ 0.19
SF3B3-215ENST00000577085 YJEFN3A6XGL0 299 aa16.22■□□□□ 0.19
SF3B3-215ENST00000577085 E7ENQ6 273 aa16.22■□□□□ 0.19
SF3B3-215ENST00000577085 SGK1O00141 431 aa16.22■□□□□ 0.19
SF3B3-215ENST00000577085 FBXO21O94952 628 aa16.22■□□□□ 0.19
SF3B3-215ENST00000577085 KLKB1P03952 638 aa16.22■□□□□ 0.19
SF3B3-215ENST00000577085 KIR2DL1P43626 348 aaPredicted RBP16.22■□□□□ 0.19
SF3B3-215ENST00000577085 CSRP2Q16527 193 aa16.22■□□□□ 0.19
SF3B3-215ENST00000577085 EXOC3L4Q17RC7 722 aa16.22■□□□□ 0.19
SF3B3-215ENST00000577085 PMF1Q6P1K2 205 aa16.22■□□□□ 0.19
SF3B3-215ENST00000577085 TRIM65Q6PJ69 517 aa16.22■□□□□ 0.19
SF3B3-215ENST00000577085 ERMP1Q7Z2K6 904 aa16.22■□□□□ 0.19
SF3B3-215ENST00000577085 DGLUCYQ7Z3D6 616 aa16.22■□□□□ 0.19
SF3B3-215ENST00000577085 CHPFQ8IZ52 775 aa16.22■□□□□ 0.19
SF3B3-215ENST00000577085 PHTF2Q8N3S3 785 aa16.22■□□□□ 0.19
SF3B3-215ENST00000577085 C12orf50Q8NA57 414 aaPredicted RBP16.22■□□□□ 0.19
SF3B3-215ENST00000577085 DDI1Q8WTU0 396 aa16.22■□□□□ 0.19
SF3B3-215ENST00000577085 SLC35F5Q8WV83 523 aa16.22■□□□□ 0.19
SF3B3-215ENST00000577085 HMGB4Q8WW32 186 aa16.22■□□□□ 0.19
SF3B3-215ENST00000577085 IRGQQ8WZA9 623 aa16.22■□□□□ 0.19
SF3B3-215ENST00000577085 SPACA7Q96KW9 195 aa16.22■□□□□ 0.19
SF3B3-215ENST00000577085 HSFY1Q96LI6 401 aa16.22■□□□□ 0.19
SF3B3-215ENST00000577085 GBP4Q96PP9 640 aa16.22■□□□□ 0.19
SF3B3-215ENST00000577085 MIS12Q9H081 205 aa16.22■□□□□ 0.19
SF3B3-215ENST00000577085 ARRDC1-AS1Q9H2J1 176 aa16.22■□□□□ 0.19
SF3B3-215ENST00000577085 INVSQ9Y283 1065 aa16.22■□□□□ 0.19
SF3B3-215ENST00000577085 HBS1LQ9Y450 684 aaKnown RBP16.22■□□□□ 0.19
SF3B3-215ENST00000577085 ATG2BQ96BY7 2078 aa16.22■□□□□ 0.19
SF3B3-215ENST00000577085 TCRBV21S2A2A0A5A6 115 aa16.21■□□□□ 0.19
SF3B3-215ENST00000577085 ANTXRLA6NF34 631 aa16.21■□□□□ 0.19
SF3B3-215ENST00000577085 PES1O00541 588 aaKnown RBP16.21■□□□□ 0.19
SF3B3-215ENST00000577085 TRIM24O15164 1050 aa16.21■□□□□ 0.19
SF3B3-215ENST00000577085 MAP3K13O43283 966 aa16.21■□□□□ 0.19
SF3B3-215ENST00000577085 LETM1O95202 739 aaPredicted RBP16.21■□□□□ 0.19
SF3B3-215ENST00000577085 CALCAP01258 141 aa16.21■□□□□ 0.19
SF3B3-215ENST00000577085 HOXB2P14652 356 aa16.21■□□□□ 0.19
SF3B3-215ENST00000577085 ZNF132P52740 706 aa16.21■□□□□ 0.19
SF3B3-215ENST00000577085 DAOAP59103 153 aa16.21■□□□□ 0.19
SF3B3-215ENST00000577085 FOXK2Q01167 660 aa16.21■□□□□ 0.19
SF3B3-215ENST00000577085 BYSLQ13895 437 aaKnown RBP16.21■□□□□ 0.19
SF3B3-215ENST00000577085 PKDCCQ504Y2 493 aa16.21■□□□□ 0.19
SF3B3-215ENST00000577085 TMEM92Q6UXU6 159 aa16.21■□□□□ 0.19
SF3B3-215ENST00000577085 RASSF3Q86WH2 238 aa16.21■□□□□ 0.19
SF3B3-215ENST00000577085 SCML4Q8N228 414 aa16.21■□□□□ 0.19
SF3B3-215ENST00000577085 MDGA1Q8NFP4 955 aa16.21■□□□□ 0.19
SF3B3-215ENST00000577085 ZC3H10Q96K80 434 aaKnown RBP16.21■□□□□ 0.19
SF3B3-215ENST00000577085 KREMEN1Q96MU8 473 aa16.21■□□□□ 0.19
SF3B3-215ENST00000577085 THAP9Q9H5L6 903 aa16.21■□□□□ 0.19
SF3B3-215ENST00000577085 PARD6AQ9NPB6 346 aa16.21■□□□□ 0.19
SF3B3-215ENST00000577085 SFMBT1Q9UHJ3 866 aa16.21■□□□□ 0.19
SF3B3-215ENST00000577085 GOLGA6L22H0YM25 854 aa16.2■□□□□ 0.18
SF3B3-215ENST00000577085 DCLK1O15075 740 aa16.2■□□□□ 0.18
SF3B3-215ENST00000577085 SART1O43290 800 aaKnown RBP16.2■□□□□ 0.18
SF3B3-215ENST00000577085 THAP12O43422 761 aa16.2■□□□□ 0.18
SF3B3-215ENST00000577085 EPN2O95208 641 aa16.2■□□□□ 0.18
SF3B3-215ENST00000577085 PRKCSHP14314 528 aaPredicted RBP16.2■□□□□ 0.18
SF3B3-215ENST00000577085 GNA15P30679 374 aa16.2■□□□□ 0.18
SF3B3-215ENST00000577085 NTSR1P30989 418 aa16.2■□□□□ 0.18
SF3B3-215ENST00000577085 ACADSBP45954 432 aa16.2■□□□□ 0.18
SF3B3-215ENST00000577085 E2F5Q15329 346 aa16.2■□□□□ 0.18
SF3B3-215ENST00000577085 ARHGAP44Q17R89 818 aa16.2■□□□□ 0.18
SF3B3-215ENST00000577085 DPCR1Q3MIW9 517 aa16.2■□□□□ 0.18
SF3B3-215ENST00000577085 PLK5Q496M5 336 aa16.2■□□□□ 0.18
SF3B3-215ENST00000577085 AASDHQ4L235 1098 aaPredicted RBP16.2■□□□□ 0.18
SF3B3-215ENST00000577085 PRR23CQ6ZRP0 262 aa16.2■□□□□ 0.18
SF3B3-215ENST00000577085 TOGARAM2Q6ZUX3 1019 aa16.2■□□□□ 0.18
SF3B3-215ENST00000577085 ZSWIM1Q9BR11 485 aa16.2■□□□□ 0.18
SF3B3-215ENST00000577085 TRIM62Q9BVG3 475 aa16.2■□□□□ 0.18
SF3B3-215ENST00000577085 APEX2Q9UBZ4 518 aa16.2■□□□□ 0.18
SF3B3-215ENST00000577085 STARD13Q9Y3M8 1113 aa16.2■□□□□ 0.18
SF3B3-215ENST00000577085 PCDHGA5Q9Y5G8 931 aa16.2■□□□□ 0.18
SF3B3-215ENST00000577085 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.2■□□□□ 0.18
SF3B3-215ENST00000577085 KIAA1549LQ6ZVL6 1849 aa16.19■□□□□ 0.18
SF3B3-215ENST00000577085 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.19■□□□□ 0.18
SF3B3-215ENST00000577085 GTPBP10A4D1E9 387 aaKnown RBP16.19■□□□□ 0.18
SF3B3-215ENST00000577085 CAPN9O14815 690 aa16.19■□□□□ 0.18
SF3B3-215ENST00000577085 ADAM23O75077 832 aa16.19■□□□□ 0.18
SF3B3-215ENST00000577085 LTFP02788 710 aa16.19■□□□□ 0.18
SF3B3-215ENST00000577085 NCAM1P13591 858 aa16.19■□□□□ 0.18
SF3B3-215ENST00000577085 SLC9A1P19634 815 aa16.19■□□□□ 0.18
SF3B3-215ENST00000577085 ERCC5P28715 1186 aaPredicted RBP16.19■□□□□ 0.18
SF3B3-215ENST00000577085 WASP42768 502 aa16.19■□□□□ 0.18
SF3B3-215ENST00000577085 ZNF445P59923 1031 aa16.19■□□□□ 0.18
SF3B3-215ENST00000577085 CREB5Q02930 508 aa16.19■□□□□ 0.18
SF3B3-215ENST00000577085 ARID5AQ03989 594 aa16.19■□□□□ 0.18
SF3B3-215ENST00000577085 TRIP4Q15650 581 aaPredicted RBP16.19■□□□□ 0.18
SF3B3-215ENST00000577085 MAN2A1Q16706 1144 aa16.19■□□□□ 0.18
SF3B3-215ENST00000577085 MPPE1Q53F39 396 aa16.19■□□□□ 0.18
SF3B3-215ENST00000577085 EGFLAMQ63HQ2 1017 aa16.19■□□□□ 0.18
SF3B3-215ENST00000577085 BHLHA9Q7RTU4 235 aa16.19■□□□□ 0.18
SF3B3-215ENST00000577085 CPXM2Q8N436 756 aa16.19■□□□□ 0.18
SF3B3-215ENST00000577085 UCMAQ8WVF2 138 aa16.19■□□□□ 0.18
SF3B3-215ENST00000577085 FAM149B1Q96BN6 582 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms