RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 PI15O43692 258 aa8.26□□□□□ -1.09
CCDC40-215ENST00000576033 STC2O76061 302 aa8.26□□□□□ -1.09
CCDC40-215ENST00000576033 TUBB4AP04350 444 aa8.26□□□□□ -1.09
CCDC40-215ENST00000576033 CYP17A1P05093 508 aa8.26□□□□□ -1.09
CCDC40-215ENST00000576033 NCAM1P13591 858 aa8.26□□□□□ -1.09
CCDC40-215ENST00000576033 GLULP15104 373 aa8.26□□□□□ -1.09
CCDC40-215ENST00000576033 FERP16591 822 aa8.26□□□□□ -1.09
CCDC40-215ENST00000576033 TARSP26639 723 aaKnown RBP8.26□□□□□ -1.09
CCDC40-215ENST00000576033 CORO1AP31146 461 aaKnown RBP8.26□□□□□ -1.09
CCDC40-215ENST00000576033 FLT3P36888 993 aa8.26□□□□□ -1.09
CCDC40-215ENST00000576033 TUBP50607 506 aa8.26□□□□□ -1.09
CCDC40-215ENST00000576033 RNASE9P60153 205 aaKnown RBP8.26□□□□□ -1.09
CCDC40-215ENST00000576033 ZBED6P86452 979 aa8.26□□□□□ -1.09
CCDC40-215ENST00000576033 SIGLEC14Q08ET2 396 aa8.26□□□□□ -1.09
CCDC40-215ENST00000576033 ZNF268Q14587 947 aaPredicted RBP8.26□□□□□ -1.09
CCDC40-215ENST00000576033 TDRD12Q587J7 1177 aaKnown RBP8.26□□□□□ -1.09
CCDC40-215ENST00000576033 FAM102AQ5T9C2 384 aaPredicted RBP8.26□□□□□ -1.09
CCDC40-215ENST00000576033 SH3PXD2AQ5TCZ1 1133 aa8.26□□□□□ -1.09
CCDC40-215ENST00000576033 SFMBT2Q5VUG0 894 aa8.26□□□□□ -1.09
CCDC40-215ENST00000576033 DAB2IPQ5VWQ8 1189 aa8.26□□□□□ -1.09
CCDC40-215ENST00000576033 BTBD8Q5XKL5 378 aa8.26□□□□□ -1.09
CCDC40-215ENST00000576033 RAD9BQ6WBX8 426 aa8.26□□□□□ -1.09
CCDC40-215ENST00000576033 MON1BQ7L1V2 547 aa8.26□□□□□ -1.09
CCDC40-215ENST00000576033 RSRC2Q7L4I2 434 aaKnown RBP8.26□□□□□ -1.09
CCDC40-215ENST00000576033 CPNE8Q86YQ8 564 aa8.26□□□□□ -1.09
CCDC40-215ENST00000576033 TMTC1Q8IUR5 882 aa8.26□□□□□ -1.09
CCDC40-215ENST00000576033 DEFB106AQ8N104 65 aa8.26□□□□□ -1.09
CCDC40-215ENST00000576033 FLCNQ8NFG4 579 aa8.26□□□□□ -1.09
CCDC40-215ENST00000576033 EZH1Q92800 747 aaPredicted RBP8.26□□□□□ -1.09
CCDC40-215ENST00000576033 HSFY1Q96LI6 401 aa8.26□□□□□ -1.09
CCDC40-215ENST00000576033 FAM83CQ9BQN1 747 aa8.26□□□□□ -1.09
CCDC40-215ENST00000576033 DNAI2Q9GZS0 605 aa8.26□□□□□ -1.09
CCDC40-215ENST00000576033 LHX5Q9H2C1 402 aa8.26□□□□□ -1.09
CCDC40-215ENST00000576033 SYNCQ9H7C4 482 aa8.26□□□□□ -1.09
CCDC40-215ENST00000576033 FBRSL1Q9HCM7 1045 aaKnown RBP8.26□□□□□ -1.09
CCDC40-215ENST00000576033 SLC2A4RGQ9NR83 387 aa8.26□□□□□ -1.09
CCDC40-215ENST00000576033 RBM12Q9NTZ6 932 aaKnown RBP8.26□□□□□ -1.09
CCDC40-215ENST00000576033 C2orf42Q9NWW7 574 aa8.26□□□□□ -1.09
CCDC40-215ENST00000576033 COMMD8Q9NX08 183 aa8.26□□□□□ -1.09
CCDC40-215ENST00000576033 ARHGAP20Q9P2F6 1191 aa8.26□□□□□ -1.09
CCDC40-215ENST00000576033 NDRG2Q9UN36 371 aaKnown RBP8.26□□□□□ -1.09
CCDC40-215ENST00000576033 PIAS3Q9Y6X2 628 aa8.26□□□□□ -1.09
CCDC40-215ENST00000576033 KIF2AO00139 706 aaPredicted RBP8.25□□□□□ -1.09
CCDC40-215ENST00000576033 CHADO15335 359 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 DAB1O75553 588 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 LSM8O95777 96 aaKnown RBP8.25□□□□□ -1.09
CCDC40-215ENST00000576033 MOCS2O96007 188 aaPredicted RBP8.25□□□□□ -1.09
CCDC40-215ENST00000576033 DCNP07585 359 aaKnown RBP8.25□□□□□ -1.09
CCDC40-215ENST00000576033 TPM1P09493 284 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 RALAP11233 206 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 RRM1P23921 792 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 WEE1P30291 646 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 ATP5C1P36542 298 aaKnown RBP8.25□□□□□ -1.09
CCDC40-215ENST00000576033 IFNAR2P48551 515 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 IRAK1P51617 712 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 OGDHQ02218 1023 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 CENPCQ03188 943 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 KDSRQ06136 332 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 KLHL30Q0D2K2 578 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 MLF2Q15773 248 aaPredicted RBP8.25□□□□□ -1.09
CCDC40-215ENST00000576033 C15orf59Q2T9L4 293 aaPredicted RBP8.25□□□□□ -1.09
CCDC40-215ENST00000576033 SLC44A4Q53GD3 710 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 DCAF6Q58WW2 860 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 NADSYN1Q6IA69 706 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 PKN3Q6P5Z2 889 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 Q6ZNB5 142 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 ZNF662Q6ZS27 426 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 Q6ZS52 159 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 TPGS1Q6ZTW0 290 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 ERICH1Q86X53 443 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 CIR1Q86X95 450 aaPredicted RBP8.25□□□□□ -1.09
CCDC40-215ENST00000576033 TMEM25Q86YD3 366 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 DENND1CQ8IV53 801 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 YAF2Q8IY57 180 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 TMEM105Q8N8V8 129 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 TMEM35BQ8NCS4 154 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 OR8K1Q8NGG5 319 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 STK32AQ8WU08 396 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 DEPDC1BQ8WUY9 529 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 OSCP1Q8WVF1 389 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 ERLEC1Q96DZ1 483 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 FCRL2Q96LA5 508 aaPredicted RBP8.25□□□□□ -1.09
CCDC40-215ENST00000576033 CFAP57Q96MR6 1250 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 SLC2A13Q96QE2 648 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 TBCBQ99426 244 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 CHP1Q99653 195 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 PACSIN1Q9BY11 444 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 MAGEB5Q9BZ81 275 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 TBC1D17Q9HA65 648 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 KIF9Q9HAQ2 790 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 DUS2Q9NX74 493 aaKnown RBP8.25□□□□□ -1.09
CCDC40-215ENST00000576033 PLK2Q9NYY3 685 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 CLIC5Q9NZA1 410 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 EHD2Q9NZN4 543 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 AIPL1Q9NZN9 384 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 MARCH2Q9P0N8 246 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 DNMT3LQ9UJW3 386 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 CLEC4EQ9ULY5 219 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 TFR2Q9UP52 801 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 PPP2R2CQ9Y2T4 447 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms