RNA–Protein interactions for RNA: ENST00000575857.3

SLC12A4-215, Transcript of solute carrier family 12 member 4, human

TSL 3

Gene SLC12A4, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC12A4-215	ENST00000575857	SYNC	Q9H7C4	482 aa		11.32	□□□□□ -0.6
SLC12A4-215	ENST00000575857	BRD9	Q9H8M2	597 aa		11.32	□□□□□ -0.6
SLC12A4-215	ENST00000575857	WNT16	Q9UBV4	365 aa		11.32	□□□□□ -0.6
SLC12A4-215	ENST00000575857	SFMBT1	Q9UHJ3	866 aa		11.32	□□□□□ -0.6
SLC12A4-215	ENST00000575857	RASAL2	Q9UJF2	1139 aa		11.32	□□□□□ -0.6
SLC12A4-215	ENST00000575857	TMEM59L	Q9UK28	342 aa		11.32	□□□□□ -0.6
SLC12A4-215	ENST00000575857	NENF	Q9UMX5	172 aa		11.32	□□□□□ -0.6
SLC12A4-215	ENST00000575857	BZW2	Q9Y6E2	419 aa	Known RBP	11.32	□□□□□ -0.6
SLC12A4-215	ENST00000575857	WNT6	Q9Y6F9	365 aa		11.32	□□□□□ -0.6
SLC12A4-215	ENST00000575857	COL4A2	P08572	1712 aa		11.32	□□□□□ -0.6
SLC12A4-215	ENST00000575857	HELZ	P42694	1942 aa	Known RBP	11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	F5	P12259	2224 aa		11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	SLC12A8	A0AV02	714 aa		11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	KRBA1	A5PL33	1030 aa		11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	OTOL1	A6NHN0	477 aa	Predicted RBP	11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	PROB1	E7EW31	1015 aa		11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	SCAMP3	O14828	347 aa	Known RBP	11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	DAB1	O75553	588 aa		11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	GRAP2	O75791	330 aa		11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	IGLV3-27	P01718	113 aa		11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	KLKB1	P03952	638 aa		11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	GZMA	P12544	262 aa		11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	NCAM1	P13591	858 aa		11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	NSF	P46459	744 aa	Known RBP	11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	ADK	P55263	362 aa	Known RBP	11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	COG7	P83436	770 aa		11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	PFKP	Q01813	784 aa		11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	C1QBP	Q07021	282 aa	Known RBP	11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	TNK2	Q07912	1038 aa		11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	PDGFRL	Q15198	375 aa		11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	ASTE1	Q2TB18	679 aa	Predicted RBP	11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	EML3	Q32P44	896 aa		11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	OTUD1	Q5VV17	481 aa	Predicted RBP	11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	TRIM68	Q6AZZ1	485 aa		11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	RSRC2	Q7L4I2	434 aa	Known RBP	11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	ARC	Q7LC44	396 aa		11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	TAC4	Q86UU9	113 aa		11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	YAF2	Q8IY57	180 aa		11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	MCOLN2	Q8IZK6	566 aa		11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	DEFB106A	Q8N104	65 aa		11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	TC2N	Q8N9U0	490 aa		11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	MSANTD4	Q8NCY6	345 aa		11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	GOLGA1	Q92805	767 aa		11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	IRF7	Q92985	503 aa		11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	CHFR	Q96EP1	664 aa		11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	SLC39A13	Q96H72	371 aa		11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	TRIM62	Q9BVG3	475 aa		11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	ADAM33	Q9BZ11	813 aa		11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	LINC00597	Q9H2U6	94 aa		11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	MFSD1	Q9H3U5	465 aa		11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	ABHD10	Q9NUJ1	306 aa		11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	SEPT11	Q9NVA2	429 aa	Known RBP	11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	THG1L	Q9NWX6	298 aa	Known RBP	11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	ADAM22	Q9P0K1	906 aa		11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	HBS1L	Q9Y450	684 aa	Known RBP	11.31	□□□□□ -0.6
SLC12A4-215	ENST00000575857	CACNA1H	O95180	2353 aa		11.3	□□□□□ -0.6
SLC12A4-215	ENST00000575857		A0A087X0T9	212 aa		11.3	□□□□□ -0.6
SLC12A4-215	ENST00000575857	AKR1B15	C9JRZ8	316 aa	Predicted RBP	11.3	□□□□□ -0.6
SLC12A4-215	ENST00000575857	MSI1	O43347	362 aa	Known RBP	11.3	□□□□□ -0.6
SLC12A4-215	ENST00000575857	FAM228B	P0C875	321 aa		11.3	□□□□□ -0.6
SLC12A4-215	ENST00000575857	IRF1	P10914	325 aa		11.3	□□□□□ -0.6
SLC12A4-215	ENST00000575857	ARSA	P15289	507 aa		11.3	□□□□□ -0.6
SLC12A4-215	ENST00000575857	CDC25B	P30305	580 aa		11.3	□□□□□ -0.6
SLC12A4-215	ENST00000575857	FLT3	P36888	993 aa		11.3	□□□□□ -0.6
SLC12A4-215	ENST00000575857	NBL1	P41271	181 aa		11.3	□□□□□ -0.6
SLC12A4-215	ENST00000575857	MLLT6	P55198	1093 aa	Predicted RBP	11.3	□□□□□ -0.6
SLC12A4-215	ENST00000575857	MAPK8IP2	Q13387	824 aa	Predicted RBP	11.3	□□□□□ -0.6
SLC12A4-215	ENST00000575857	NNT	Q13423	1086 aa		11.3	□□□□□ -0.6
SLC12A4-215	ENST00000575857	GAB4	Q2WGN9	574 aa		11.3	□□□□□ -0.6
SLC12A4-215	ENST00000575857	SLC44A4	Q53GD3	710 aa		11.3	□□□□□ -0.6
SLC12A4-215	ENST00000575857	TDRD12	Q587J7	1177 aa	Known RBP	11.3	□□□□□ -0.6
SLC12A4-215	ENST00000575857	PPP1R15B	Q5SWA1	713 aa		11.3	□□□□□ -0.6
SLC12A4-215	ENST00000575857	FAM102A	Q5T9C2	384 aa	Predicted RBP	11.3	□□□□□ -0.6
SLC12A4-215	ENST00000575857	BNIPL	Q7Z465	357 aa		11.3	□□□□□ -0.6
SLC12A4-215	ENST00000575857	DNAAF5	Q86Y56	855 aa		11.3	□□□□□ -0.6
SLC12A4-215	ENST00000575857	CNGA4	Q8IV77	575 aa		11.3	□□□□□ -0.6
SLC12A4-215	ENST00000575857	BBS7	Q8IWZ6	715 aa		11.3	□□□□□ -0.6
SLC12A4-215	ENST00000575857	NT5C3B	Q969T7	300 aa		11.3	□□□□□ -0.6
SLC12A4-215	ENST00000575857	PLD4	Q96BZ4	506 aa		11.3	□□□□□ -0.6
SLC12A4-215	ENST00000575857	VCPIP1	Q96JH7	1222 aa		11.3	□□□□□ -0.6
SLC12A4-215	ENST00000575857	NPY6R	Q99463	290 aa		11.3	□□□□□ -0.6
SLC12A4-215	ENST00000575857	CHP1	Q99653	195 aa		11.3	□□□□□ -0.6
SLC12A4-215	ENST00000575857	ISCU	Q9H1K1	167 aa		11.3	□□□□□ -0.6
SLC12A4-215	ENST00000575857	EBF3	Q9H4W6	596 aa		11.3	□□□□□ -0.6
SLC12A4-215	ENST00000575857	DUS2	Q9NX74	493 aa	Known RBP	11.3	□□□□□ -0.6
SLC12A4-215	ENST00000575857	GTSE1	Q9NYZ3	720 aa		11.3	□□□□□ -0.6
SLC12A4-215	ENST00000575857	CALCOCO1	Q9P1Z2	691 aa		11.3	□□□□□ -0.6
SLC12A4-215	ENST00000575857	WDR35	Q9P2L0	1181 aa		11.3	□□□□□ -0.6
SLC12A4-215	ENST00000575857	ADAMTS1	Q9UHI8	967 aa		11.3	□□□□□ -0.6
SLC12A4-215	ENST00000575857	STRIP2	Q9ULQ0	834 aa		11.3	□□□□□ -0.6
SLC12A4-215	ENST00000575857	SH3BP1	Q9Y3L3	701 aa		11.3	□□□□□ -0.6
SLC12A4-215	ENST00000575857	DCHS1	Q96JQ0	3298 aa		11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	SSU72P8	A0A1W2PR75	194 aa		11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	GOLGA8S	H3BPF8	625 aa		11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	GFRA2	O00451	464 aa		11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	SLC9A3R1	O14745	358 aa	Predicted RBP	11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	CAPN9	O14815	690 aa		11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	IRAK2	O43187	625 aa		11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	GJB6	O95452	261 aa		11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	ADCY5	O95622	1261 aa		11.29	□□□□□ -0.6

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