RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 MRPL47Q9HD33 250 aaKnown RBP14.59□□□□□ -0.07
RPAIN-217ENST00000575711 LSM7Q9UK45 103 aaKnown RBP14.59□□□□□ -0.07
RPAIN-217ENST00000575711 HBS1LQ9Y450 684 aaKnown RBP14.59□□□□□ -0.07
RPAIN-217ENST00000575711 SCINQ9Y6U3 715 aa14.59□□□□□ -0.07
RPAIN-217ENST00000575711 NUP210Q8TEM1 1887 aaPredicted RBP14.59□□□□□ -0.07
RPAIN-217ENST00000575711 TCRBV5S1A1TA0A578 114 aa14.58□□□□□ -0.08
RPAIN-217ENST00000575711 E2F8A0AVK6 867 aa14.58□□□□□ -0.08
RPAIN-217ENST00000575711 SOWAHDA6NJG2 315 aa14.58□□□□□ -0.08
RPAIN-217ENST00000575711 ZNF263O14978 683 aa14.58□□□□□ -0.08
RPAIN-217ENST00000575711 MSI1O43347 362 aaKnown RBP14.58□□□□□ -0.08
RPAIN-217ENST00000575711 IPO7O95373 1038 aaKnown RBP14.58□□□□□ -0.08
RPAIN-217ENST00000575711 GJB6O95452 261 aa14.58□□□□□ -0.08
RPAIN-217ENST00000575711 TRUB2O95900 331 aaKnown RBP14.58□□□□□ -0.08
RPAIN-217ENST00000575711 HMBSP08397 361 aa14.58□□□□□ -0.08
RPAIN-217ENST00000575711 H2AFZP0C0S5 128 aa14.58□□□□□ -0.08
RPAIN-217ENST00000575711 GBP1P32455 592 aa14.58□□□□□ -0.08
RPAIN-217ENST00000575711 FLT3P36888 993 aa14.58□□□□□ -0.08
RPAIN-217ENST00000575711 SULT1E1P49888 294 aa14.58□□□□□ -0.08
RPAIN-217ENST00000575711 GALCP54803 685 aa14.58□□□□□ -0.08
RPAIN-217ENST00000575711 TBX4P57082 545 aa14.58□□□□□ -0.08
RPAIN-217ENST00000575711 GPC5P78333 572 aa14.58□□□□□ -0.08
RPAIN-217ENST00000575711 FCHO2Q0JRZ9 810 aa14.58□□□□□ -0.08
RPAIN-217ENST00000575711 NNTQ13423 1086 aa14.58□□□□□ -0.08
RPAIN-217ENST00000575711 TRIP4Q15650 581 aaPredicted RBP14.58□□□□□ -0.08
RPAIN-217ENST00000575711 ARHGAP29Q52LW3 1261 aa14.58□□□□□ -0.08
RPAIN-217ENST00000575711 PLEKHA7Q6IQ23 1121 aa14.58□□□□□ -0.08
RPAIN-217ENST00000575711 DCUN1D2Q6PH85 259 aa14.58□□□□□ -0.08
RPAIN-217ENST00000575711 H2AFVQ71UI9 128 aa14.58□□□□□ -0.08
RPAIN-217ENST00000575711 EMC1Q8N766 993 aa14.58□□□□□ -0.08
RPAIN-217ENST00000575711 KIAA1958Q8N8K9 716 aa14.58□□□□□ -0.08
RPAIN-217ENST00000575711 JOSD2Q8TAC2 188 aa14.58□□□□□ -0.08
RPAIN-217ENST00000575711 RIN3Q8TB24 985 aa14.58□□□□□ -0.08
RPAIN-217ENST00000575711 ADAM32Q8TC27 787 aa14.58□□□□□ -0.08
RPAIN-217ENST00000575711 PLD4Q96BZ4 506 aa14.58□□□□□ -0.08
RPAIN-217ENST00000575711 LRRC3BQ96PB8 259 aa14.58□□□□□ -0.08
RPAIN-217ENST00000575711 MCEEQ96PE7 176 aa14.58□□□□□ -0.08
RPAIN-217ENST00000575711 DDX23Q9BUQ8 820 aaKnown RBP14.58□□□□□ -0.08
RPAIN-217ENST00000575711 THAP2Q9H0W7 228 aa14.58□□□□□ -0.08
RPAIN-217ENST00000575711 MYO1AQ9UBC5 1043 aa14.58□□□□□ -0.08
RPAIN-217ENST00000575711 SORCS3Q9UPU3 1222 aa14.58□□□□□ -0.08
RPAIN-217ENST00000575711 UNC80Q8N2C7 3258 aa14.58□□□□□ -0.08
RPAIN-217ENST00000575711 TCF20Q9UGU0 1960 aaKnown RBP14.57□□□□□ -0.08
RPAIN-217ENST00000575711 SYNJ2BP-COX16A0A087WUM0 186 aa14.57□□□□□ -0.08
RPAIN-217ENST00000575711 C2CD4BA6NLJ0 364 aa14.57□□□□□ -0.08
RPAIN-217ENST00000575711 M0QYT0 321 aa14.57□□□□□ -0.08
RPAIN-217ENST00000575711 SLC9A3R1O14745 358 aaPredicted RBP14.57□□□□□ -0.08
RPAIN-217ENST00000575711 IRAK2O43187 625 aa14.57□□□□□ -0.08
RPAIN-217ENST00000575711 STC2O76061 302 aa14.57□□□□□ -0.08
RPAIN-217ENST00000575711 IGLV3-25P01717 112 aa14.57□□□□□ -0.08
RPAIN-217ENST00000575711 PDGFRAP16234 1089 aa14.57□□□□□ -0.08
RPAIN-217ENST00000575711 DESP17661 470 aa14.57□□□□□ -0.08
RPAIN-217ENST00000575711 GPD1P21695 349 aa14.57□□□□□ -0.08
RPAIN-217ENST00000575711 GDI1P31150 447 aa14.57□□□□□ -0.08
RPAIN-217ENST00000575711 SDC4P31431 198 aa14.57□□□□□ -0.08
RPAIN-217ENST00000575711 IFNAR2P48551 515 aa14.57□□□□□ -0.08
RPAIN-217ENST00000575711 HARS2P49590 506 aaKnown RBP14.57□□□□□ -0.08
RPAIN-217ENST00000575711 MAMLD1Q13495 774 aa14.57□□□□□ -0.08
RPAIN-217ENST00000575711 SPA17Q15506 151 aa14.57□□□□□ -0.08
RPAIN-217ENST00000575711 SLC25A52Q3SY17 297 aa14.57□□□□□ -0.08
RPAIN-217ENST00000575711 PPP1R15BQ5SWA1 713 aa14.57□□□□□ -0.08
RPAIN-217ENST00000575711 C10orf76Q5T2E6 689 aa14.57□□□□□ -0.08
RPAIN-217ENST00000575711 NUGGCQ68CJ6 796 aa14.57□□□□□ -0.08
RPAIN-217ENST00000575711 RXFP2Q8WXD0 754 aa14.57□□□□□ -0.08
RPAIN-217ENST00000575711 CTNNBL1Q8WYA6 563 aaPredicted RBP14.57□□□□□ -0.08
RPAIN-217ENST00000575711 NPY6RQ99463 290 aa14.57□□□□□ -0.08
RPAIN-217ENST00000575711 DCLK3Q9C098 648 aa14.57□□□□□ -0.08
RPAIN-217ENST00000575711 BRD9Q9H8M2 597 aa14.57□□□□□ -0.08
RPAIN-217ENST00000575711 CD320Q9NPF0 282 aa14.57□□□□□ -0.08
RPAIN-217ENST00000575711 LUC7LQ9NQ29 371 aaKnown RBP14.57□□□□□ -0.08
RPAIN-217ENST00000575711 TMEM51Q9NW97 253 aa14.57□□□□□ -0.08
RPAIN-217ENST00000575711 DDIT4Q9NX09 232 aa14.57□□□□□ -0.08
RPAIN-217ENST00000575711 COX16Q9P0S2 106 aa14.57□□□□□ -0.08
RPAIN-217ENST00000575711 TBC1D14Q9P2M4 693 aa14.57□□□□□ -0.08
RPAIN-217ENST00000575711 TLR6Q9Y2C9 796 aa14.57□□□□□ -0.08
RPAIN-217ENST00000575711 EIF3CLB5ME19 914 aaKnown RBP14.56□□□□□ -0.08
RPAIN-217ENST00000575711 CHADO15335 359 aa14.56□□□□□ -0.08
RPAIN-217ENST00000575711 NRDCO43847 1150 aa14.56□□□□□ -0.08
RPAIN-217ENST00000575711 NDUFA10O95299 355 aa14.56□□□□□ -0.08
RPAIN-217ENST00000575711 LCA5LO95447 670 aa14.56□□□□□ -0.08
RPAIN-217ENST00000575711 F9P00740 461 aa14.56□□□□□ -0.08
RPAIN-217ENST00000575711 CYP1A2P05177 515 aa14.56□□□□□ -0.08
RPAIN-217ENST00000575711 CORO1AP31146 461 aaKnown RBP14.56□□□□□ -0.08
RPAIN-217ENST00000575711 RFC1P35251 1148 aaPredicted RBP14.56□□□□□ -0.08
RPAIN-217ENST00000575711 PITX1P78337 314 aaPredicted RBP14.56□□□□□ -0.08
RPAIN-217ENST00000575711 RING1Q06587 406 aa14.56□□□□□ -0.08
RPAIN-217ENST00000575711 NME3Q13232 169 aa14.56□□□□□ -0.08
RPAIN-217ENST00000575711 PDGFRLQ15198 375 aa14.56□□□□□ -0.08
RPAIN-217ENST00000575711 TRNP1Q6NT89 227 aa14.56□□□□□ -0.08
RPAIN-217ENST00000575711 HTR3DQ70Z44 454 aa14.56□□□□□ -0.08
RPAIN-217ENST00000575711 TMEM139Q8IV31 216 aa14.56□□□□□ -0.08
RPAIN-217ENST00000575711 UNC45BQ8IWX7 931 aa14.56□□□□□ -0.08
RPAIN-217ENST00000575711 CCDC112Q8NEF3 446 aa14.56□□□□□ -0.08
RPAIN-217ENST00000575711 OSCP1Q8WVF1 389 aa14.56□□□□□ -0.08
RPAIN-217ENST00000575711 IRF7Q92985 503 aa14.56□□□□□ -0.08
RPAIN-217ENST00000575711 NT5C3BQ969T7 300 aa14.56□□□□□ -0.08
RPAIN-217ENST00000575711 PGAP3Q96FM1 320 aaPredicted RBP14.56□□□□□ -0.08
RPAIN-217ENST00000575711 CFAP57Q96MR6 1250 aa14.56□□□□□ -0.08
RPAIN-217ENST00000575711 TBCBQ99426 244 aa14.56□□□□□ -0.08
RPAIN-217ENST00000575711 EIF3CQ99613 913 aaKnown RBP14.56□□□□□ -0.08
RPAIN-217ENST00000575711 PACSIN1Q9BY11 444 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms