RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 ZFP14Q9HCL3 533 aa17.83■□□□□ 0.44
NUP88-210ENST00000574867 DPYSL4O14531 572 aa17.82■□□□□ 0.44
NUP88-210ENST00000574867 GJB6O95452 261 aa17.82■□□□□ 0.44
NUP88-210ENST00000574867 TRUB2O95900 331 aaKnown RBP17.82■□□□□ 0.44
NUP88-210ENST00000574867 PDGFRAP16234 1089 aa17.82■□□□□ 0.44
NUP88-210ENST00000574867 FCARP24071 287 aa17.82■□□□□ 0.44
NUP88-210ENST00000574867 GBP1P32455 592 aa17.82■□□□□ 0.44
NUP88-210ENST00000574867 RPL7AP62424 266 aaKnown RBP17.82■□□□□ 0.44
NUP88-210ENST00000574867 USP4Q13107 963 aa17.82■□□□□ 0.44
NUP88-210ENST00000574867 TRNP1Q6NT89 227 aa17.82■□□□□ 0.44
NUP88-210ENST00000574867 TAC4Q86UU9 113 aa17.82■□□□□ 0.44
NUP88-210ENST00000574867 KIAA1958Q8N8K9 716 aa17.82■□□□□ 0.44
NUP88-210ENST00000574867 ACRBPQ8NEB7 543 aa17.82■□□□□ 0.44
NUP88-210ENST00000574867 RXFP2Q8WXD0 754 aa17.82■□□□□ 0.44
NUP88-210ENST00000574867 RFFLQ8WZ73 363 aa17.82■□□□□ 0.44
NUP88-210ENST00000574867 PGAP3Q96FM1 320 aaPredicted RBP17.82■□□□□ 0.44
NUP88-210ENST00000574867 KLF16Q9BXK1 252 aaPredicted RBP17.82■□□□□ 0.44
NUP88-210ENST00000574867 SMG9Q9H0W8 520 aaKnown RBP17.82■□□□□ 0.44
NUP88-210ENST00000574867 SFMBT1Q9UHJ3 866 aa17.82■□□□□ 0.44
NUP88-210ENST00000574867 LCMT1Q9UIC8 334 aa17.82■□□□□ 0.44
NUP88-210ENST00000574867 TMEM191CA6NGB0 347 aa17.81■□□□□ 0.44
NUP88-210ENST00000574867 LOC730098B7Z3J9 87 aa17.81■□□□□ 0.44
NUP88-210ENST00000574867 IRAK2O43187 625 aa17.81■□□□□ 0.44
NUP88-210ENST00000574867 ECI2O75521 394 aa17.81■□□□□ 0.44
NUP88-210ENST00000574867 SULT1E1P49888 294 aa17.81■□□□□ 0.44
NUP88-210ENST00000574867 VAV2P52735 878 aa17.81■□□□□ 0.44
NUP88-210ENST00000574867 ZNF143P52747 638 aaPredicted RBP17.81■□□□□ 0.44
NUP88-210ENST00000574867 TRIP4Q15650 581 aaPredicted RBP17.81■□□□□ 0.44
NUP88-210ENST00000574867 NXPE3Q969Y0 559 aa17.81■□□□□ 0.44
NUP88-210ENST00000574867 ELSPBP1Q96BH3 223 aa17.81■□□□□ 0.44
NUP88-210ENST00000574867 PLD4Q96BZ4 506 aa17.81■□□□□ 0.44
NUP88-210ENST00000574867 CFAP57Q96MR6 1250 aa17.81■□□□□ 0.44
NUP88-210ENST00000574867 SMPD4Q9NXE4 827 aa17.81■□□□□ 0.44
NUP88-210ENST00000574867 CTTNBP2NLQ9P2B4 639 aa17.81■□□□□ 0.44
NUP88-210ENST00000574867 TLR6Q9Y2C9 796 aa17.81■□□□□ 0.44
NUP88-210ENST00000574867 REXO2Q9Y3B8 237 aaKnown RBP17.81■□□□□ 0.44
NUP88-210ENST00000574867 SLC12A8A0AV02 714 aa17.81■□□□□ 0.44
NUP88-210ENST00000574867 ANHXE9PGG2 379 aa17.81■□□□□ 0.44
NUP88-210ENST00000574867 F9P00740 461 aa17.81■□□□□ 0.44
NUP88-210ENST00000574867 ZP2Q05996 745 aa17.81■□□□□ 0.44
NUP88-210ENST00000574867 RING1Q06587 406 aa17.81■□□□□ 0.44
NUP88-210ENST00000574867 HTR4Q13639 388 aa17.81■□□□□ 0.44
NUP88-210ENST00000574867 ZNF564Q8TBZ8 553 aaPredicted RBP17.81■□□□□ 0.44
NUP88-210ENST00000574867 SH3RF2Q8TEC5 729 aa17.81■□□□□ 0.44
NUP88-210ENST00000574867 DESI2Q9BSY9 194 aa17.81■□□□□ 0.44
NUP88-210ENST00000574867 DDIT4Q9NX09 232 aa17.81■□□□□ 0.44
NUP88-210ENST00000574867 CCL26Q9Y258 94 aa17.81■□□□□ 0.44
NUP88-210ENST00000574867 M0QYT0 321 aa17.8■□□□□ 0.44
NUP88-210ENST00000574867 LEFTY2O00292 366 aa17.8■□□□□ 0.44
NUP88-210ENST00000574867 MSI1O43347 362 aaKnown RBP17.8■□□□□ 0.44
NUP88-210ENST00000574867 TCEAL1Q15170 157 aa17.8■□□□□ 0.44
NUP88-210ENST00000574867 ZNF77Q15935 545 aa17.8■□□□□ 0.44
NUP88-210ENST00000574867 CCDC14Q49A88 953 aa17.8■□□□□ 0.44
NUP88-210ENST00000574867 KIAA1328Q86T90 577 aa17.8■□□□□ 0.44
NUP88-210ENST00000574867 DEPDC1BQ8WUY9 529 aa17.8■□□□□ 0.44
NUP88-210ENST00000574867 CNPY3Q9BT09 278 aa17.8■□□□□ 0.44
NUP88-210ENST00000574867 IGSF9Q9P2J2 1179 aa17.8■□□□□ 0.44
NUP88-210ENST00000574867 LSM7Q9UK45 103 aaKnown RBP17.8■□□□□ 0.44
NUP88-210ENST00000574867 PAXBP1Q9Y5B6 917 aa17.8■□□□□ 0.44
NUP88-210ENST00000574867 KIF26AQ9ULI4 1882 aaPredicted RBP17.8■□□□□ 0.44
NUP88-210ENST00000574867 A0A0A6YYK5 440 aaPredicted RBP17.79■□□□□ 0.44
NUP88-210ENST00000574867 BMP1P13497 986 aa17.79■□□□□ 0.44
NUP88-210ENST00000574867 VIPR2P41587 438 aa17.79■□□□□ 0.44
NUP88-210ENST00000574867 TBX4P57082 545 aa17.79■□□□□ 0.44
NUP88-210ENST00000574867 PITX1P78337 314 aaPredicted RBP17.79■□□□□ 0.44
NUP88-210ENST00000574867 OTUD1Q5VV17 481 aaPredicted RBP17.79■□□□□ 0.44
NUP88-210ENST00000574867 NUGGCQ68CJ6 796 aa17.79■□□□□ 0.44
NUP88-210ENST00000574867 PARM1Q6UWI2 310 aa17.79■□□□□ 0.44
NUP88-210ENST00000574867 STRADAQ7RTN6 431 aa17.79■□□□□ 0.44
NUP88-210ENST00000574867 BNIPLQ7Z465 357 aa17.79■□□□□ 0.44
NUP88-210ENST00000574867 ADAM32Q8TC27 787 aa17.79■□□□□ 0.44
NUP88-210ENST00000574867 BPIFB1Q8TDL5 484 aa17.79■□□□□ 0.44
NUP88-210ENST00000574867 FGF14Q92915 247 aa17.79■□□□□ 0.44
NUP88-210ENST00000574867 TBCBQ99426 244 aa17.79■□□□□ 0.44
NUP88-210ENST00000574867 CFAP97Q9P2B7 532 aa17.79■□□□□ 0.44
NUP88-210ENST00000574867 ANAPC7Q9UJX3 599 aa17.79■□□□□ 0.44
NUP88-210ENST00000574867 SH3BP1Q9Y3L3 701 aa17.79■□□□□ 0.44
NUP88-210ENST00000574867 ADGRG1Q9Y653 693 aa17.79■□□□□ 0.44
NUP88-210ENST00000574867 HEPACAM2A8MVW5 462 aa17.79■□□□□ 0.44
NUP88-210ENST00000574867 STC2O76061 302 aa17.79■□□□□ 0.44
NUP88-210ENST00000574867 MTA2O94776 668 aa17.79■□□□□ 0.44
NUP88-210ENST00000574867 IGLV3-27P01718 113 aa17.79■□□□□ 0.44
NUP88-210ENST00000574867 SLC2A3P11169 496 aa17.79■□□□□ 0.44
NUP88-210ENST00000574867 RDXP35241 583 aaKnown RBP17.79■□□□□ 0.44
NUP88-210ENST00000574867 ZXDBP98169 803 aa17.79■□□□□ 0.44
NUP88-210ENST00000574867 EIF4EBP2Q13542 120 aaPredicted RBP17.79■□□□□ 0.44
NUP88-210ENST00000574867 TANGO2Q6ICL3 276 aa17.79■□□□□ 0.44
NUP88-210ENST00000574867 SND1Q7KZF4 910 aaKnown RBP eCLIP17.79■□□□□ 0.44
NUP88-210ENST00000574867 DCLK3Q9C098 648 aa17.79■□□□□ 0.44
NUP88-210ENST00000574867 KCNF1Q9H3M0 494 aa17.79■□□□□ 0.44
NUP88-210ENST00000574867 NUMBLQ9Y6R0 609 aa17.79■□□□□ 0.44
NUP88-210ENST00000574867 C5orf42Q9H799 3197 aa17.79■□□□□ 0.44
NUP88-210ENST00000574867 E2F8A0AVK6 867 aa17.78■□□□□ 0.44
NUP88-210ENST00000574867 BTNL10A8MVZ5 291 aa17.78■□□□□ 0.44
NUP88-210ENST00000574867 PJA2O43164 708 aa17.78■□□□□ 0.44
NUP88-210ENST00000574867 ENDOD1O94919 500 aa17.78■□□□□ 0.44
NUP88-210ENST00000574867 CCDC175P0C221 793 aa17.78■□□□□ 0.44
NUP88-210ENST00000574867 IRF1P10914 325 aa17.78■□□□□ 0.44
NUP88-210ENST00000574867 PSMA2P25787 234 aa17.78■□□□□ 0.44
NUP88-210ENST00000574867 DEUP1Q05D60 604 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms