RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 KIAA2013Q8IYS2 634 aa11.53□□□□□ -0.56
CHD3-216ENST00000573936 CPA6Q8N4T0 437 aa11.53□□□□□ -0.56
CHD3-216ENST00000573936 TTC16Q8NEE8 873 aa11.53□□□□□ -0.56
CHD3-216ENST00000573936 CLEC4CQ8WTT0 213 aa11.53□□□□□ -0.56
CHD3-216ENST00000573936 SLC20A1Q8WUM9 679 aa11.53□□□□□ -0.56
CHD3-216ENST00000573936 EXOC4Q96A65 974 aa11.53□□□□□ -0.56
CHD3-216ENST00000573936 ZFRQ96KR1 1074 aaKnown RBP11.53□□□□□ -0.56
CHD3-216ENST00000573936 TRIM5Q9C035 493 aa11.53□□□□□ -0.56
CHD3-216ENST00000573936 POPDC2Q9HBU9 364 aa11.53□□□□□ -0.56
CHD3-216ENST00000573936 ARHGEF3Q9NR81 526 aa11.53□□□□□ -0.56
CHD3-216ENST00000573936 SEPT11Q9NVA2 429 aaKnown RBP11.53□□□□□ -0.56
CHD3-216ENST00000573936 TMEM51Q9NW97 253 aa11.53□□□□□ -0.56
CHD3-216ENST00000573936 NUDT5Q9UKK9 219 aa11.53□□□□□ -0.56
CHD3-216ENST00000573936 HBS1LQ9Y450 684 aaKnown RBP11.53□□□□□ -0.56
CHD3-216ENST00000573936 ZNF638Q14966 1978 aaKnown RBP11.53□□□□□ -0.56
CHD3-216ENST00000573936 OBSL1O75147 1896 aa11.53□□□□□ -0.56
CHD3-216ENST00000573936 SLC12A8A0AV02 714 aa11.52□□□□□ -0.57
CHD3-216ENST00000573936 ARNTLO00327 626 aa11.52□□□□□ -0.57
CHD3-216ENST00000573936 AP5Z1O43299 807 aa11.52□□□□□ -0.57
CHD3-216ENST00000573936 HSF2BPO75031 334 aa11.52□□□□□ -0.57
CHD3-216ENST00000573936 ERBB2P04626 1255 aa11.52□□□□□ -0.57
CHD3-216ENST00000573936 IRF1P10914 325 aa11.52□□□□□ -0.57
CHD3-216ENST00000573936 CHRNB2P17787 502 aa11.52□□□□□ -0.57
CHD3-216ENST00000573936 NSFP46459 744 aaKnown RBP11.52□□□□□ -0.57
CHD3-216ENST00000573936 STARD6P59095 220 aa11.52□□□□□ -0.57
CHD3-216ENST00000573936 YWHAZP63104 245 aaKnown RBP11.52□□□□□ -0.57
CHD3-216ENST00000573936 CLEC16AQ2KHT3 1053 aa11.52□□□□□ -0.57
CHD3-216ENST00000573936 TSR1Q2NL82 804 aaKnown RBP11.52□□□□□ -0.57
CHD3-216ENST00000573936 MIB1Q86YT6 1006 aa11.52□□□□□ -0.57
CHD3-216ENST00000573936 CPLX3Q8WVH0 158 aa11.52□□□□□ -0.57
CHD3-216ENST00000573936 CPA5Q8WXQ8 436 aa11.52□□□□□ -0.57
CHD3-216ENST00000573936 EDEM1Q92611 657 aa11.52□□□□□ -0.57
CHD3-216ENST00000573936 PLD4Q96BZ4 506 aa11.52□□□□□ -0.57
CHD3-216ENST00000573936 ZFYVE19Q96K21 471 aa11.52□□□□□ -0.57
CHD3-216ENST00000573936 TBC1D17Q9HA65 648 aa11.52□□□□□ -0.57
CHD3-216ENST00000573936 GRPEL1Q9HAV7 217 aa11.52□□□□□ -0.57
CHD3-216ENST00000573936 WDR35Q9P2L0 1181 aa11.52□□□□□ -0.57
CHD3-216ENST00000573936 MRPS17Q9Y2R5 130 aaKnown RBP11.52□□□□□ -0.57
CHD3-216ENST00000573936 ANAPC1Q9H1A4 1944 aa11.52□□□□□ -0.57
CHD3-216ENST00000573936 MDM4O15151 490 aa11.51□□□□□ -0.57
CHD3-216ENST00000573936 STC2O76061 302 aa11.51□□□□□ -0.57
CHD3-216ENST00000573936 UNGP13051 313 aaPredicted RBP11.51□□□□□ -0.57
CHD3-216ENST00000573936 GBP1P32455 592 aa11.51□□□□□ -0.57
CHD3-216ENST00000573936 HARS2P49590 506 aaKnown RBP11.51□□□□□ -0.57
CHD3-216ENST00000573936 CENPCQ03188 943 aa11.51□□□□□ -0.57
CHD3-216ENST00000573936 NNTQ13423 1086 aa11.51□□□□□ -0.57
CHD3-216ENST00000573936 PUM1Q14671 1186 aaKnown RBP eCLIP11.51□□□□□ -0.57
CHD3-216ENST00000573936 EML3Q32P44 896 aa11.51□□□□□ -0.57
CHD3-216ENST00000573936 OLFML1Q6UWY5 402 aa11.51□□□□□ -0.57
CHD3-216ENST00000573936 ZNF852Q6ZMS4 543 aa11.51□□□□□ -0.57
CHD3-216ENST00000573936 FAM183BPQ6ZVS7 135 aa11.51□□□□□ -0.57
CHD3-216ENST00000573936 SLC26A9Q7LBE3 791 aa11.51□□□□□ -0.57
CHD3-216ENST00000573936 VPS36Q86VN1 386 aa11.51□□□□□ -0.57
CHD3-216ENST00000573936 RALGPS2Q86X27 583 aaPredicted RBP11.51□□□□□ -0.57
CHD3-216ENST00000573936 VSTM4Q8IW00 320 aa11.51□□□□□ -0.57
CHD3-216ENST00000573936 UNC45BQ8IWX7 931 aa11.51□□□□□ -0.57
CHD3-216ENST00000573936 ADGRG2Q8IZP9 1017 aa11.51□□□□□ -0.57
CHD3-216ENST00000573936 RIN3Q8TB24 985 aa11.51□□□□□ -0.57
CHD3-216ENST00000573936 SERPINB11Q96P15 392 aa11.51□□□□□ -0.57
CHD3-216ENST00000573936 NELL2Q99435 816 aa11.51□□□□□ -0.57
CHD3-216ENST00000573936 EBF3Q9H4W6 596 aa11.51□□□□□ -0.57
CHD3-216ENST00000573936 HAUS4Q9H6D7 363 aa11.51□□□□□ -0.57
CHD3-216ENST00000573936 ECT2Q9H8V3 914 aa11.51□□□□□ -0.57
CHD3-216ENST00000573936 HEBP1Q9NRV9 189 aa11.51□□□□□ -0.57
CHD3-216ENST00000573936 RRN3Q9NYV6 651 aa11.51□□□□□ -0.57
CHD3-216ENST00000573936 TJP2Q9UDY2 1190 aa11.51□□□□□ -0.57
CHD3-216ENST00000573936 SFMBT1Q9UHJ3 866 aa11.51□□□□□ -0.57
CHD3-216ENST00000573936 SIT1Q9Y3P8 196 aa11.51□□□□□ -0.57
CHD3-216ENST00000573936 WNT6Q9Y6F9 365 aa11.51□□□□□ -0.57
CHD3-216ENST00000573936 PIAS3Q9Y6X2 628 aa11.51□□□□□ -0.57
CHD3-216ENST00000573936 R4GN57 208 aa11.51□□□□□ -0.57
CHD3-216ENST00000573936 MYO16Q9Y6X6 1858 aa11.51□□□□□ -0.57
CHD3-216ENST00000573936 COL4A3Q01955 1670 aa11.5□□□□□ -0.57
CHD3-216ENST00000573936 KANSL1LA0AUZ9 987 aa11.5□□□□□ -0.57
CHD3-216ENST00000573936 NCAM2O15394 837 aa11.5□□□□□ -0.57
CHD3-216ENST00000573936 LATS1O95835 1130 aa11.5□□□□□ -0.57
CHD3-216ENST00000573936 GYPCP04921 128 aa11.5□□□□□ -0.57
CHD3-216ENST00000573936 SERPING1P05155 500 aa11.5□□□□□ -0.57
CHD3-216ENST00000573936 CALB1P05937 261 aa11.5□□□□□ -0.57
CHD3-216ENST00000573936 FYNP06241 537 aa11.5□□□□□ -0.57
CHD3-216ENST00000573936 HMBSP08397 361 aa11.5□□□□□ -0.57
CHD3-216ENST00000573936 ARSAP15289 507 aa11.5□□□□□ -0.57
CHD3-216ENST00000573936 MMP8P22894 467 aa11.5□□□□□ -0.57
CHD3-216ENST00000573936 CASP14P31944 242 aa11.5□□□□□ -0.57
CHD3-216ENST00000573936 NOS2P35228 1153 aa11.5□□□□□ -0.57
CHD3-216ENST00000573936 CHKAP35790 457 aa11.5□□□□□ -0.57
CHD3-216ENST00000573936 GSCP56915 257 aaPredicted RBP11.5□□□□□ -0.57
CHD3-216ENST00000573936 CDK17Q00537 523 aa11.5□□□□□ -0.57
CHD3-216ENST00000573936 RING1Q06587 406 aa11.5□□□□□ -0.57
CHD3-216ENST00000573936 TNK2Q07912 1038 aa11.5□□□□□ -0.57
CHD3-216ENST00000573936 TRIP4Q15650 581 aaPredicted RBP11.5□□□□□ -0.57
CHD3-216ENST00000573936 TDRD12Q587J7 1177 aaKnown RBP11.5□□□□□ -0.57
CHD3-216ENST00000573936 TRIM68Q6AZZ1 485 aa11.5□□□□□ -0.57
CHD3-216ENST00000573936 ACAD10Q6JQN1 1059 aa11.5□□□□□ -0.57
CHD3-216ENST00000573936 TPRG1Q6ZUI0 275 aa11.5□□□□□ -0.57
CHD3-216ENST00000573936 ARCQ7LC44 396 aa11.5□□□□□ -0.57
CHD3-216ENST00000573936 XYLT1Q86Y38 959 aa11.5□□□□□ -0.57
CHD3-216ENST00000573936 PHF13Q86YI8 300 aaPredicted RBP11.5□□□□□ -0.57
CHD3-216ENST00000573936 DRC7Q8IY82 874 aa11.5□□□□□ -0.57
CHD3-216ENST00000573936 SLC30A5Q8TAD4 765 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms