RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 MAN1A1P33908 653 aa6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 NOS2P35228 1153 aa6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 RDXP35241 583 aaKnown RBP6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 RFC1P35251 1148 aaPredicted RBP6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 FLT3P36888 993 aa6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 SLC19A1P41440 591 aa6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 SLC1A1P43005 524 aa6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 PTPN9P43378 593 aa6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 TUBP50607 506 aa6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 ZNF143P52747 638 aaPredicted RBP6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 HADHBP55084 474 aaKnown RBP6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 GNG11P61952 73 aa6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 RPL7AP62424 266 aaKnown RBP6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 ATP11AP98196 1134 aa6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 DEUP1Q05D60 604 aa6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 HYAL1Q12794 435 aa6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 NME3Q13232 169 aa6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 ACAP1Q15027 740 aa6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 HADHQ16836 314 aaKnown RBP6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 ZNF569Q5MCW4 686 aa6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 DNTTIP2Q5QJE6 756 aaKnown RBP6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 RARS2Q5T160 578 aaKnown RBP6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 HECTD3Q5T447 861 aa6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 BSPRYQ5W0U4 402 aa6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 PM20D1Q6GTS8 502 aa6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 CES5AQ6NT32 575 aa6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 TMC5Q6UXY8 1006 aa6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 ARCQ7LC44 396 aa6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 PEX26Q7Z412 305 aa6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 DNAJB7Q7Z6W7 309 aaPredicted RBP6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 REXO1L1PQ8IX06 675 aa6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 DEFB106AQ8N104 65 aa6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 UBL4BQ8N7F7 174 aa6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 CMASQ8NFW8 434 aaPredicted RBP6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 TPCN2Q8NHX9 752 aa6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 JOSD2Q8TAC2 188 aa6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 FAM172AQ8WUF8 416 aa6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 RXFP2Q8WXD0 754 aa6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 MYRFLQ96LU7 910 aa6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 CFAP57Q96MR6 1250 aa6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 SLC2A13Q96QE2 648 aa6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 CNPY3Q9BT09 278 aa6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 C1QTNF2Q9BXJ5 285 aa6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 PRKD2Q9BZL6 878 aa6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 ATXN3LQ9H3M9 355 aa6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 SMOC2Q9H3U7 446 aa6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 KCND1Q9NSA2 647 aa6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 TMEM51Q9NW97 253 aa6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 DDIT4Q9NX09 232 aa6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 CLIC5Q9NZA1 410 aa6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 AMFRQ9UKV5 643 aa6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 CAPN6Q9Y6Q1 641 aa6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 PLXNA4Q9HCM2 1894 aa6.87□□□□□ -1.31
CTDNEP1-204ENST00000570484 GBF1Q92538 1859 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 CLUHO75153 1309 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 TRAV19A0A0A6YYK7 116 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 A0A0U1RQJ8 604 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 A0A1W2PRU2 124 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 TCRBV5S1A1TA0A578 114 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 FAM92AA1XBS5 289 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 GRID2IPA4D2P6 1211 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 CTAGE9A4FU28 777 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 ZNF840PA6NDX5 716 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 C2CD4BA6NLJ0 364 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 MIF4GDA9UHW6 222 aaKnown RBP6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 M0QYT0 321 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 BUB1BO60566 1050 aaPredicted RBP6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 FTCDO95954 541 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 F9P00740 461 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 TUBB4AP04350 444 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 SLC2A3P11169 496 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 MBL2P11226 248 aaPredicted RBP6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 TNNT1P13805 278 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 HMGA1P17096 107 aaKnown RBP6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 DDX6P26196 483 aaKnown RBP eCLIP6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 GTF2F1P35269 517 aaKnown RBP eCLIP6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 AVPR1AP37288 418 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 CETN2P41208 172 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 DNA2P51530 1060 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 KPNA1P52294 538 aaPredicted RBP6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 RBM10P98175 930 aaKnown RBP6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 CYP4F8P98187 520 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 ITIH3Q06033 890 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 EFEMP1Q12805 493 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 TCEAL1Q15170 157 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 TAF5Q15542 800 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 ARL13BQ3SXY8 428 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 SLC25A52Q3SY17 297 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 ANKRD54Q6NXT1 300 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 SCYL2Q6P3W7 929 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 HFE2Q6ZVN8 426 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 BEND5Q7L4P6 421 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 GET4Q7L5D6 327 aaPredicted RBP6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 STRADAQ7RTN6 431 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 TAC4Q86UU9 113 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 BPHLQ86WA6 291 aaPredicted RBP6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 MIB1Q86YT6 1006 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 DEFB123Q8N688 67 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 NIPA2Q8N8Q9 360 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 TTC16Q8NEE8 873 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms