RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 MAN1C1Q9NR34 630 aa10.23□□□□□ -0.77
SF3B3-207ENST00000566095 DDIT4Q9NX09 232 aa10.23□□□□□ -0.77
SF3B3-207ENST00000566095 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.23□□□□□ -0.77
SF3B3-207ENST00000566095 GMIPQ9P107 970 aa10.23□□□□□ -0.77
SF3B3-207ENST00000566095 PCYOX1Q9UHG3 505 aa10.23□□□□□ -0.77
SF3B3-207ENST00000566095 DNMT3LQ9UJW3 386 aa10.23□□□□□ -0.77
SF3B3-207ENST00000566095 USP18Q9UMW8 372 aa10.23□□□□□ -0.77
SF3B3-207ENST00000566095 HBS1LQ9Y450 684 aaKnown RBP10.23□□□□□ -0.77
SF3B3-207ENST00000566095 PLXNA4Q9HCM2 1894 aa10.23□□□□□ -0.77
SF3B3-207ENST00000566095 A0A1W2PQH9 124 aa10.22□□□□□ -0.77
SF3B3-207ENST00000566095 FAM170AA1A519 330 aa10.22□□□□□ -0.77
SF3B3-207ENST00000566095 HIDE1A8MVS5 230 aa10.22□□□□□ -0.77
SF3B3-207ENST00000566095 BHMG1C9JSJ3 638 aaPredicted RBP10.22□□□□□ -0.77
SF3B3-207ENST00000566095 PDE2AO00408 941 aaPredicted RBP10.22□□□□□ -0.77
SF3B3-207ENST00000566095 MDM4O15151 490 aa10.22□□□□□ -0.77
SF3B3-207ENST00000566095 CEP104O60308 925 aa10.22□□□□□ -0.77
SF3B3-207ENST00000566095 TLR5O60602 858 aa10.22□□□□□ -0.77
SF3B3-207ENST00000566095 LRCH4O75427 683 aa10.22□□□□□ -0.77
SF3B3-207ENST00000566095 ENDOD1O94919 500 aa10.22□□□□□ -0.77
SF3B3-207ENST00000566095 TRUB2O95900 331 aaKnown RBP10.22□□□□□ -0.77
SF3B3-207ENST00000566095 KRT1P04264 644 aa10.22□□□□□ -0.77
SF3B3-207ENST00000566095 ZDHHC11BP0C7U3 371 aa10.22□□□□□ -0.77
SF3B3-207ENST00000566095 RARGP13631 454 aa10.22□□□□□ -0.77
SF3B3-207ENST00000566095 ZFXP17010 805 aaPredicted RBP10.22□□□□□ -0.77
SF3B3-207ENST00000566095 MIPP30301 263 aa10.22□□□□□ -0.77
SF3B3-207ENST00000566095 ARL4AP40617 200 aa10.22□□□□□ -0.77
SF3B3-207ENST00000566095 GPR15P49685 360 aa10.22□□□□□ -0.77
SF3B3-207ENST00000566095 CUL1Q13616 776 aa10.22□□□□□ -0.77
SF3B3-207ENST00000566095 TFDP2Q14188 446 aa10.22□□□□□ -0.77
SF3B3-207ENST00000566095 TAZQ16635 292 aa10.22□□□□□ -0.77
SF3B3-207ENST00000566095 C10orf120Q5SQS8 335 aa10.22□□□□□ -0.77
SF3B3-207ENST00000566095 ERMARDQ5T6L9 678 aa10.22□□□□□ -0.77
SF3B3-207ENST00000566095 ZNF697Q5TEC3 545 aa10.22□□□□□ -0.77
SF3B3-207ENST00000566095 PDZD4Q76G19 769 aaPredicted RBP10.22□□□□□ -0.77
SF3B3-207ENST00000566095 DNAJB7Q7Z6W7 309 aaPredicted RBP10.22□□□□□ -0.77
SF3B3-207ENST00000566095 CCDC50Q8IVM0 306 aa10.22□□□□□ -0.77
SF3B3-207ENST00000566095 TTC9BQ8N6N2 239 aa10.22□□□□□ -0.77
SF3B3-207ENST00000566095 ATP6V0D2Q8N8Y2 350 aa10.22□□□□□ -0.77
SF3B3-207ENST00000566095 TTC13Q8NBP0 860 aa10.22□□□□□ -0.77
SF3B3-207ENST00000566095 KCTD6Q8NC69 237 aa10.22□□□□□ -0.77
SF3B3-207ENST00000566095 CMASQ8NFW8 434 aaPredicted RBP10.22□□□□□ -0.77
SF3B3-207ENST00000566095 CCHCR1Q8TD31 782 aa10.22□□□□□ -0.77
SF3B3-207ENST00000566095 GDPD5Q8WTR4 605 aa10.22□□□□□ -0.77
SF3B3-207ENST00000566095 CLEC4CQ8WTT0 213 aa10.22□□□□□ -0.77
SF3B3-207ENST00000566095 ALG3Q92685 438 aa10.22□□□□□ -0.77
SF3B3-207ENST00000566095 NT5C3BQ969T7 300 aa10.22□□□□□ -0.77
SF3B3-207ENST00000566095 NTAN1Q96AB6 310 aa10.22□□□□□ -0.77
SF3B3-207ENST00000566095 BTBD6Q96KE9 485 aa10.22□□□□□ -0.77
SF3B3-207ENST00000566095 MAK16Q9BXY0 300 aaKnown RBP10.22□□□□□ -0.77
SF3B3-207ENST00000566095 ZNF576Q9H609 170 aa10.22□□□□□ -0.77
SF3B3-207ENST00000566095 WDCPQ9H6R7 721 aa10.22□□□□□ -0.77
SF3B3-207ENST00000566095 LRRC19Q9H756 370 aa10.22□□□□□ -0.77
SF3B3-207ENST00000566095 ZWILCHQ9H900 591 aa10.22□□□□□ -0.77
SF3B3-207ENST00000566095 PIDD1Q9HB75 910 aa10.22□□□□□ -0.77
SF3B3-207ENST00000566095 ARFGAP3Q9NP61 516 aa10.22□□□□□ -0.77
SF3B3-207ENST00000566095 TMEM30AQ9NV96 361 aa10.22□□□□□ -0.77
SF3B3-207ENST00000566095 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.22□□□□□ -0.77
SF3B3-207ENST00000566095 STIM2Q9P246 746 aa10.22□□□□□ -0.77
SF3B3-207ENST00000566095 RCOR3Q9P2K3 495 aaPredicted RBP10.22□□□□□ -0.77
SF3B3-207ENST00000566095 CHORDC1Q9UHD1 332 aaPredicted RBP10.22□□□□□ -0.77
SF3B3-207ENST00000566095 TLR6Q9Y2C9 796 aa10.22□□□□□ -0.77
SF3B3-207ENST00000566095 GBF1Q92538 1859 aa10.21□□□□□ -0.77
SF3B3-207ENST00000566095 LRRD1A4D1F6 860 aa10.21□□□□□ -0.77
SF3B3-207ENST00000566095 H3BRJ5 948 aa10.21□□□□□ -0.77
SF3B3-207ENST00000566095 KRIT1O00522 736 aa10.21□□□□□ -0.77
SF3B3-207ENST00000566095 SRGAP2O75044 1071 aa10.21□□□□□ -0.77
SF3B3-207ENST00000566095 SOAT2O75908 522 aa10.21□□□□□ -0.77
SF3B3-207ENST00000566095 TJP3O95049 919 aa10.21□□□□□ -0.77
SF3B3-207ENST00000566095 VNN2O95498 520 aa10.21□□□□□ -0.77
SF3B3-207ENST00000566095 HOXB8P17481 243 aaPredicted RBP10.21□□□□□ -0.77
SF3B3-207ENST00000566095 DNAJB1P25685 340 aa10.21□□□□□ -0.77
SF3B3-207ENST00000566095 GJC1P36383 396 aa10.21□□□□□ -0.77
SF3B3-207ENST00000566095 HARS2P49590 506 aaKnown RBP10.21□□□□□ -0.77
SF3B3-207ENST00000566095 RING1Q06587 406 aa10.21□□□□□ -0.77
SF3B3-207ENST00000566095 NME3Q13232 169 aa10.21□□□□□ -0.77
SF3B3-207ENST00000566095 PPP2R5DQ14738 602 aa10.21□□□□□ -0.77
SF3B3-207ENST00000566095 ELF2Q15723 593 aa10.21□□□□□ -0.77
SF3B3-207ENST00000566095 SPDYCQ5MJ68 293 aa10.21□□□□□ -0.77
SF3B3-207ENST00000566095 TEX35Q5T0J7 233 aa10.21□□□□□ -0.77
SF3B3-207ENST00000566095 SDHAF4Q5VUM1 108 aa10.21□□□□□ -0.77
SF3B3-207ENST00000566095 C8orf74Q6P047 294 aa10.21□□□□□ -0.77
SF3B3-207ENST00000566095 LLGL2Q6P1M3 1020 aa10.21□□□□□ -0.77
SF3B3-207ENST00000566095 BZW1Q7L1Q6 419 aaKnown RBP10.21□□□□□ -0.77
SF3B3-207ENST00000566095 SLC13A5Q86YT5 568 aaPredicted RBP10.21□□□□□ -0.77
SF3B3-207ENST00000566095 IFT20Q8IY31 132 aa10.21□□□□□ -0.77
SF3B3-207ENST00000566095 FAM71BQ8TC56 605 aa10.21□□□□□ -0.77
SF3B3-207ENST00000566095 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.21□□□□□ -0.77
SF3B3-207ENST00000566095 DQX1Q8TE96 717 aaKnown RBP10.21□□□□□ -0.77
SF3B3-207ENST00000566095 SLC22A17Q8WUG5 538 aa10.21□□□□□ -0.77
SF3B3-207ENST00000566095 EDEM1Q92611 657 aa10.21□□□□□ -0.77
SF3B3-207ENST00000566095 PLD4Q96BZ4 506 aa10.21□□□□□ -0.77
SF3B3-207ENST00000566095 GAS2L1Q99501 681 aaPredicted RBP10.21□□□□□ -0.77
SF3B3-207ENST00000566095 EPAS1Q99814 870 aa10.21□□□□□ -0.77
SF3B3-207ENST00000566095 FERMT1Q9BQL6 677 aa10.21□□□□□ -0.77
SF3B3-207ENST00000566095 PARD6BQ9BYG5 372 aa10.21□□□□□ -0.77
SF3B3-207ENST00000566095 PRKD2Q9BZL6 878 aa10.21□□□□□ -0.77
SF3B3-207ENST00000566095 DCLK3Q9C098 648 aa10.21□□□□□ -0.77
SF3B3-207ENST00000566095 RAB17Q9H0T7 212 aa10.21□□□□□ -0.77
SF3B3-207ENST00000566095 TSPYL1Q9H0U9 437 aa10.21□□□□□ -0.77
SF3B3-207ENST00000566095 CRISPLD1Q9H336 500 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms