RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 ZXDBP98169 803 aa13.18□□□□□ -0.3
SF3B3-206ENST00000565990 TERF2Q15554 542 aa13.18□□□□□ -0.3
SF3B3-206ENST00000565990 FAM78AQ5JUQ0 283 aa13.18□□□□□ -0.3
SF3B3-206ENST00000565990 TRNP1Q6NT89 227 aa13.18□□□□□ -0.3
SF3B3-206ENST00000565990 BNIPLQ7Z465 357 aa13.18□□□□□ -0.3
SF3B3-206ENST00000565990 ARID3BQ8IVW6 561 aaPredicted RBP13.18□□□□□ -0.3
SF3B3-206ENST00000565990 ZDHHC14Q8IZN3 488 aa13.18□□□□□ -0.3
SF3B3-206ENST00000565990 DEFB106AQ8N104 65 aa13.18□□□□□ -0.3
SF3B3-206ENST00000565990 PLCD3Q8N3E9 789 aa13.18□□□□□ -0.3
SF3B3-206ENST00000565990 KIAA1958Q8N8K9 716 aa13.18□□□□□ -0.3
SF3B3-206ENST00000565990 ARL14EPQ8N8R7 260 aaPredicted RBP13.18□□□□□ -0.3
SF3B3-206ENST00000565990 EDEM1Q92611 657 aa13.18□□□□□ -0.3
SF3B3-206ENST00000565990 CENPIQ92674 756 aaPredicted RBP13.18□□□□□ -0.3
SF3B3-206ENST00000565990 SMARCD2Q92925 531 aa13.18□□□□□ -0.3
SF3B3-206ENST00000565990 ASB16Q96NS5 453 aa13.18□□□□□ -0.3
SF3B3-206ENST00000565990 NPY6RQ99463 290 aa13.18□□□□□ -0.3
SF3B3-206ENST00000565990 KLF16Q9BXK1 252 aaPredicted RBP13.18□□□□□ -0.3
SF3B3-206ENST00000565990 MRPL47Q9HD33 250 aaKnown RBP13.18□□□□□ -0.3
SF3B3-206ENST00000565990 ARFGAP3Q9NP61 516 aa13.18□□□□□ -0.3
SF3B3-206ENST00000565990 OLA1Q9NTK5 396 aaKnown RBP13.18□□□□□ -0.3
SF3B3-206ENST00000565990 TMEM51Q9NW97 253 aa13.18□□□□□ -0.3
SF3B3-206ENST00000565990 RRN3Q9NYV6 651 aa13.18□□□□□ -0.3
SF3B3-206ENST00000565990 CNOT8Q9UFF9 292 aaKnown RBP13.18□□□□□ -0.3
SF3B3-206ENST00000565990 RAB21Q9UL25 225 aa13.18□□□□□ -0.3
SF3B3-206ENST00000565990 REXO2Q9Y3B8 237 aaKnown RBP13.18□□□□□ -0.3
SF3B3-206ENST00000565990 FAM170AA1A519 330 aa13.17□□□□□ -0.3
SF3B3-206ENST00000565990 CCDC66A2RUB6 948 aa13.17□□□□□ -0.3
SF3B3-206ENST00000565990 C2CD4BA6NLJ0 364 aa13.17□□□□□ -0.3
SF3B3-206ENST00000565990 LOC730098B7Z3J9 87 aa13.17□□□□□ -0.3
SF3B3-206ENST00000565990 ANHXE9PGG2 379 aa13.17□□□□□ -0.3
SF3B3-206ENST00000565990 ENDOD1O94919 500 aa13.17□□□□□ -0.3
SF3B3-206ENST00000565990 NCAM1P13591 858 aa13.17□□□□□ -0.3
SF3B3-206ENST00000565990 IL9P15248 144 aa13.17□□□□□ -0.3
SF3B3-206ENST00000565990 KRT83P78385 493 aa13.17□□□□□ -0.3
SF3B3-206ENST00000565990 SPA17Q15506 151 aa13.17□□□□□ -0.3
SF3B3-206ENST00000565990 FAM102AQ5T9C2 384 aaPredicted RBP13.17□□□□□ -0.3
SF3B3-206ENST00000565990 GET4Q7L5D6 327 aaPredicted RBP13.17□□□□□ -0.3
SF3B3-206ENST00000565990 PHLDB2Q86SQ0 1253 aa13.17□□□□□ -0.3
SF3B3-206ENST00000565990 JOSD2Q8TAC2 188 aa13.17□□□□□ -0.3
SF3B3-206ENST00000565990 ZSCAN18Q8TBC5 510 aaPredicted RBP13.17□□□□□ -0.3
SF3B3-206ENST00000565990 ING5Q8WYH8 240 aa13.17□□□□□ -0.3
SF3B3-206ENST00000565990 RUBCNQ92622 972 aa13.17□□□□□ -0.3
SF3B3-206ENST00000565990 FAM149B1Q96BN6 582 aa13.17□□□□□ -0.3
SF3B3-206ENST00000565990 ACSF2Q96CM8 615 aaPredicted RBP13.17□□□□□ -0.3
SF3B3-206ENST00000565990 PGAP3Q96FM1 320 aaPredicted RBP13.17□□□□□ -0.3
SF3B3-206ENST00000565990 ZFRQ96KR1 1074 aaKnown RBP13.17□□□□□ -0.3
SF3B3-206ENST00000565990 ASB2Q96Q27 587 aa13.17□□□□□ -0.3
SF3B3-206ENST00000565990 WDR24Q96S15 920 aa13.17□□□□□ -0.3
SF3B3-206ENST00000565990 NAPGQ99747 312 aaPredicted RBP13.17□□□□□ -0.3
SF3B3-206ENST00000565990 PACSIN1Q9BY11 444 aa13.17□□□□□ -0.3
SF3B3-206ENST00000565990 TDP1Q9NUW8 608 aa13.17□□□□□ -0.3
SF3B3-206ENST00000565990 ZNF446Q9NWS9 450 aa13.17□□□□□ -0.3
SF3B3-206ENST00000565990 OBP2AQ9NY56 170 aa13.17□□□□□ -0.3
SF3B3-206ENST00000565990 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.17□□□□□ -0.3
SF3B3-206ENST00000565990 PRKAG3Q9UGI9 489 aa13.17□□□□□ -0.3
SF3B3-206ENST00000565990 DNMT3LQ9UJW3 386 aa13.17□□□□□ -0.3
SF3B3-206ENST00000565990 NUDT5Q9UKK9 219 aa13.17□□□□□ -0.3
SF3B3-206ENST00000565990 ARHGAP26Q9UNA1 814 aa13.17□□□□□ -0.3
SF3B3-206ENST00000565990 TCF20Q9UGU0 1960 aaKnown RBP13.16□□□□□ -0.3
SF3B3-206ENST00000565990 C19orf67A6NJJ6 358 aa13.16□□□□□ -0.3
SF3B3-206ENST00000565990 GOLGA8SH3BPF8 625 aa13.16□□□□□ -0.3
SF3B3-206ENST00000565990 CAPN9O14815 690 aa13.16□□□□□ -0.3
SF3B3-206ENST00000565990 GREM1O60565 184 aa13.16□□□□□ -0.3
SF3B3-206ENST00000565990 DAB1O75553 588 aa13.16□□□□□ -0.3
SF3B3-206ENST00000565990 GRAP2O75791 330 aa13.16□□□□□ -0.3
SF3B3-206ENST00000565990 FCARP24071 287 aa13.16□□□□□ -0.3
SF3B3-206ENST00000565990 FLT3P36888 993 aa13.16□□□□□ -0.3
SF3B3-206ENST00000565990 AVPR1AP37288 418 aa13.16□□□□□ -0.3
SF3B3-206ENST00000565990 KCNQ1P51787 676 aa13.16□□□□□ -0.3
SF3B3-206ENST00000565990 RNASE9P60153 205 aaKnown RBP13.16□□□□□ -0.3
SF3B3-206ENST00000565990 RPL7AP62424 266 aaKnown RBP13.16□□□□□ -0.3
SF3B3-206ENST00000565990 GPS2Q13227 327 aa13.16□□□□□ -0.3
SF3B3-206ENST00000565990 SLC25A52Q3SY17 297 aa13.16□□□□□ -0.3
SF3B3-206ENST00000565990 CCDC14Q49A88 953 aa13.16□□□□□ -0.3
SF3B3-206ENST00000565990 DCAF6Q58WW2 860 aa13.16□□□□□ -0.3
SF3B3-206ENST00000565990 TXLNBQ8N3L3 684 aa13.16□□□□□ -0.3
SF3B3-206ENST00000565990 ADAMTS19Q8TE59 1207 aa13.16□□□□□ -0.3
SF3B3-206ENST00000565990 FNIP1Q8TF40 1166 aa13.16□□□□□ -0.3
SF3B3-206ENST00000565990 RNF139Q8WU17 664 aa13.16□□□□□ -0.3
SF3B3-206ENST00000565990 RXFP2Q8WXD0 754 aa13.16□□□□□ -0.3
SF3B3-206ENST00000565990 USP13Q92995 863 aaPredicted RBP13.16□□□□□ -0.3
SF3B3-206ENST00000565990 E2F7Q96AV8 911 aa13.16□□□□□ -0.3
SF3B3-206ENST00000565990 ELSPBP1Q96BH3 223 aa13.16□□□□□ -0.3
SF3B3-206ENST00000565990 ZNF653Q96CK0 615 aa13.16□□□□□ -0.3
SF3B3-206ENST00000565990 ARHGEF26Q96DR7 871 aa13.16□□□□□ -0.3
SF3B3-206ENST00000565990 PKNOX2Q96KN3 472 aa13.16□□□□□ -0.3
SF3B3-206ENST00000565990 LRRC3BQ96PB8 259 aa13.16□□□□□ -0.3
SF3B3-206ENST00000565990 SELENOOQ9BVL4 669 aa13.16□□□□□ -0.3
SF3B3-206ENST00000565990 SMOC2Q9H3U7 446 aa13.16□□□□□ -0.3
SF3B3-206ENST00000565990 MARCH2Q9P0N8 246 aa13.16□□□□□ -0.3
SF3B3-206ENST00000565990 UVRAGQ9P2Y5 699 aa13.16□□□□□ -0.3
SF3B3-206ENST00000565990 SFMBT1Q9UHJ3 866 aa13.16□□□□□ -0.3
SF3B3-206ENST00000565990 NR2E1Q9Y466 385 aa13.16□□□□□ -0.3
SF3B3-206ENST00000565990 SCINQ9Y6U3 715 aa13.16□□□□□ -0.3
SF3B3-206ENST00000565990 BTNL10A8MVZ5 291 aa13.15□□□□□ -0.3
SF3B3-206ENST00000565990 DPYSL4O14531 572 aa13.15□□□□□ -0.3
SF3B3-206ENST00000565990 FANCGO15287 622 aa13.15□□□□□ -0.3
SF3B3-206ENST00000565990 PJA2O43164 708 aa13.15□□□□□ -0.3
SF3B3-206ENST00000565990 ECI2O75521 394 aa13.15□□□□□ -0.3
SF3B3-206ENST00000565990 MTA2O94776 668 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms