RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 HGFP14210 728 aa4.78□□□□□ -1.64
LINC00561-201ENST00000565815 TMPOP42166 694 aaKnown RBP4.78□□□□□ -1.64
LINC00561-201ENST00000565815 HHEXQ03014 270 aa4.78□□□□□ -1.64
LINC00561-201ENST00000565815 PLP2Q04941 152 aa4.78□□□□□ -1.64
LINC00561-201ENST00000565815 LMOD3Q0VAK6 560 aa4.78□□□□□ -1.64
LINC00561-201ENST00000565815 CCDC173Q0VFZ6 552 aa4.78□□□□□ -1.64
LINC00561-201ENST00000565815 CACHD1Q5VU97 1274 aa4.78□□□□□ -1.64
LINC00561-201ENST00000565815 SPSB4Q96A44 273 aa4.78□□□□□ -1.64
LINC00561-201ENST00000565815 ZNF518BQ9C0D4 1074 aa4.78□□□□□ -1.64
LINC00561-201ENST00000565815 PRO3102Q9H379 93 aa4.78□□□□□ -1.64
LINC00561-201ENST00000565815 EPS8L2Q9H6S3 715 aa4.78□□□□□ -1.64
LINC00561-201ENST00000565815 STARD7Q9NQZ5 370 aa4.78□□□□□ -1.64
LINC00561-201ENST00000565815 PLEKHM1Q9Y4G2 1056 aa4.78□□□□□ -1.64
LINC00561-201ENST00000565815 MORC2Q9Y6X9 1032 aaPredicted RBP4.78□□□□□ -1.64
LINC00561-201ENST00000565815 FAM205AQ6ZU69 1335 aa4.78□□□□□ -1.64
LINC00561-201ENST00000565815 SH3TC1Q8TE82 1336 aa4.78□□□□□ -1.64
LINC00561-201ENST00000565815 PSME4Q14997 1843 aa4.78□□□□□ -1.64
LINC00561-201ENST00000565815 KRTAP9-6A0A140TA67 174 aa4.77□□□□□ -1.65
LINC00561-201ENST00000565815 H0YGN5 161 aa4.77□□□□□ -1.65
LINC00561-201ENST00000565815 TCEA3O75764 348 aa4.77□□□□□ -1.65
LINC00561-201ENST00000565815 NDUFA10O95299 355 aa4.77□□□□□ -1.65
LINC00561-201ENST00000565815 CSF1RP07333 972 aa4.77□□□□□ -1.65
LINC00561-201ENST00000565815 PECAM1P16284 738 aaPredicted RBP4.77□□□□□ -1.65
LINC00561-201ENST00000565815 EEF1GP26641 437 aaKnown RBP4.77□□□□□ -1.65
LINC00561-201ENST00000565815 PXNP49023 591 aaPredicted RBP4.77□□□□□ -1.65
LINC00561-201ENST00000565815 RAB32Q13637 225 aa4.77□□□□□ -1.65
LINC00561-201ENST00000565815 HLFQ16534 295 aa4.77□□□□□ -1.65
LINC00561-201ENST00000565815 SLC9C1Q4G0N8 1177 aa4.77□□□□□ -1.65
LINC00561-201ENST00000565815 RBM20Q5T481 1227 aaKnown RBP4.77□□□□□ -1.65
LINC00561-201ENST00000565815 GORABQ5T7V8 394 aa4.77□□□□□ -1.65
LINC00561-201ENST00000565815 FAM160B1Q5W0V3 765 aa4.77□□□□□ -1.65
LINC00561-201ENST00000565815 HTR3DQ70Z44 454 aa4.77□□□□□ -1.65
LINC00561-201ENST00000565815 RNF44Q7L0R7 432 aa4.77□□□□□ -1.65
LINC00561-201ENST00000565815 SLC30A5Q8TAD4 765 aa4.77□□□□□ -1.65
LINC00561-201ENST00000565815 STYXQ8WUJ0 223 aa4.77□□□□□ -1.65
LINC00561-201ENST00000565815 RILPL2Q969X0 211 aa4.77□□□□□ -1.65
LINC00561-201ENST00000565815 MESP1Q9BRJ9 268 aa4.77□□□□□ -1.65
LINC00561-201ENST00000565815 MYO1AQ9UBC5 1043 aa4.77□□□□□ -1.65
LINC00561-201ENST00000565815 MAGED2Q9UNF1 606 aaPredicted RBP4.77□□□□□ -1.65
LINC00561-201ENST00000565815 LGALS16A8MUM7 142 aa4.77□□□□□ -1.65
LINC00561-201ENST00000565815 MYO1CO00159 1063 aa4.77□□□□□ -1.65
LINC00561-201ENST00000565815 PODXLO00592 558 aa4.77□□□□□ -1.65
LINC00561-201ENST00000565815 PPM1DO15297 605 aa4.77□□□□□ -1.65
LINC00561-201ENST00000565815 GCLCP48506 637 aaPredicted RBP4.77□□□□□ -1.65
LINC00561-201ENST00000565815 UBXN2AP68543 259 aa4.77□□□□□ -1.65
LINC00561-201ENST00000565815 CXADRP78310 365 aa4.77□□□□□ -1.65
LINC00561-201ENST00000565815 NUCB2P80303 420 aa4.77□□□□□ -1.65
LINC00561-201ENST00000565815 KRT17Q04695 432 aa4.77□□□□□ -1.65
LINC00561-201ENST00000565815 LONRF3Q496Y0 759 aa4.77□□□□□ -1.65
LINC00561-201ENST00000565815 DCAF17Q5H9S7 520 aaPredicted RBP4.77□□□□□ -1.65
LINC00561-201ENST00000565815 ARHGAP40Q5TG30 622 aa4.77□□□□□ -1.65
LINC00561-201ENST00000565815 CHD1LQ86WJ1 897 aa4.77□□□□□ -1.65
LINC00561-201ENST00000565815 ADGRG5Q8IZF4 528 aa4.77□□□□□ -1.65
LINC00561-201ENST00000565815 MYCT1Q8N699 235 aa4.77□□□□□ -1.65
LINC00561-201ENST00000565815 TRIM44Q96DX7 344 aaPredicted RBP4.77□□□□□ -1.65
LINC00561-201ENST00000565815 RNF31Q96EP0 1072 aa4.77□□□□□ -1.65
LINC00561-201ENST00000565815 MLST8Q9BVC4 326 aa4.77□□□□□ -1.65
LINC00561-201ENST00000565815 KLC2Q9H0B6 622 aa4.77□□□□□ -1.65
LINC00561-201ENST00000565815 MYOZ2Q9NPC6 264 aa4.77□□□□□ -1.65
LINC00561-201ENST00000565815 RLIMQ9NVW2 624 aa4.77□□□□□ -1.65
LINC00561-201ENST00000565815 DNMT3BQ9UBC3 853 aaKnown RBP4.77□□□□□ -1.65
LINC00561-201ENST00000565815 ZNF212Q9UDV6 495 aa4.77□□□□□ -1.65
LINC00561-201ENST00000565815 SSX2IPQ9Y2D8 614 aa4.77□□□□□ -1.65
LINC00561-201ENST00000565815 CCDC195A0A1B0GUA6 201 aa4.76□□□□□ -1.65
LINC00561-201ENST00000565815 MARCH11A6NNE9 402 aa4.76□□□□□ -1.65
LINC00561-201ENST00000565815 UBE2Q2LH0YL09 131 aa4.76□□□□□ -1.65
LINC00561-201ENST00000565815 HSP90AA1P07900 732 aaKnown RBP4.76□□□□□ -1.65
LINC00561-201ENST00000565815 HMOX1P09601 288 aa4.76□□□□□ -1.65
LINC00561-201ENST00000565815 CLCN2P51788 898 aa4.76□□□□□ -1.65
LINC00561-201ENST00000565815 MYO1EQ12965 1108 aa4.76□□□□□ -1.65
LINC00561-201ENST00000565815 TP53BP2Q13625 1128 aa4.76□□□□□ -1.65
LINC00561-201ENST00000565815 RABEP1Q15276 862 aa4.76□□□□□ -1.65
LINC00561-201ENST00000565815 CYP2A13Q16696 494 aa4.76□□□□□ -1.65
LINC00561-201ENST00000565815 RGS7BPQ6MZT1 257 aaPredicted RBP4.76□□□□□ -1.65
LINC00561-201ENST00000565815 DPY19L3Q6ZPD9 716 aa4.76□□□□□ -1.65
LINC00561-201ENST00000565815 ITPRIPQ8IWB1 547 aa4.76□□□□□ -1.65
LINC00561-201ENST00000565815 ENAHQ8N8S7 591 aaPredicted RBP4.76□□□□□ -1.65
LINC00561-201ENST00000565815 PPP1R9BQ96SB3 815 aa4.76□□□□□ -1.65
LINC00561-201ENST00000565815 MAP7D2Q96T17 732 aa4.76□□□□□ -1.65
LINC00561-201ENST00000565815 CNPPD1Q9BV87 410 aa4.76□□□□□ -1.65
LINC00561-201ENST00000565815 SORBS1Q9BX66 1292 aaKnown RBP4.76□□□□□ -1.65
LINC00561-201ENST00000565815 API5Q9BZZ5 524 aaKnown RBP4.76□□□□□ -1.65
LINC00561-201ENST00000565815 OBP2BQ9NPH6 170 aa4.76□□□□□ -1.65
LINC00561-201ENST00000565815 AKIP1Q9NQ31 210 aa4.76□□□□□ -1.65
LINC00561-201ENST00000565815 RRAGDQ9NQL2 400 aaPredicted RBP4.76□□□□□ -1.65
LINC00561-201ENST00000565815 FAM30AQ9NZY2 134 aa4.76□□□□□ -1.65
LINC00561-201ENST00000565815 MTO1Q9Y2Z2 717 aaKnown RBP4.76□□□□□ -1.65
LINC00561-201ENST00000565815 SRGAP2O75044 1071 aa4.76□□□□□ -1.65
LINC00561-201ENST00000565815 USP1O94782 785 aa4.76□□□□□ -1.65
LINC00561-201ENST00000565815 SPDEFO95238 335 aa4.76□□□□□ -1.65
LINC00561-201ENST00000565815 FOSP01100 380 aaPredicted RBP4.76□□□□□ -1.65
LINC00561-201ENST00000565815 ANXA2P07355 339 aaKnown RBP4.76□□□□□ -1.65
LINC00561-201ENST00000565815 MCM5P33992 734 aa4.76□□□□□ -1.65
LINC00561-201ENST00000565815 FKBP1AP62942 108 aaKnown RBP4.76□□□□□ -1.65
LINC00561-201ENST00000565815 INO80DQ53TQ3 878 aaPredicted RBP4.76□□□□□ -1.65
LINC00561-201ENST00000565815 C1orf210Q8IVY1 113 aa4.76□□□□□ -1.65
LINC00561-201ENST00000565815 CPEB3Q8NE35 698 aaKnown RBP4.76□□□□□ -1.65
LINC00561-201ENST00000565815 DNAJB14Q8TBM8 379 aa4.76□□□□□ -1.65
LINC00561-201ENST00000565815 LPIN2Q92539 896 aa4.76□□□□□ -1.65
LINC00561-201ENST00000565815 SMOQ99835 787 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms