RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 PENKP01210 267 aaPredicted RBP15.42■□□□□ 0.06
USB1-210ENST00000565151 ZNF806P0C7X5 589 aa15.42■□□□□ 0.06
USB1-210ENST00000565151 BRD2P25440 801 aaKnown RBP15.42■□□□□ 0.06
USB1-210ENST00000565151 CORO1AP31146 461 aaKnown RBP15.42■□□□□ 0.06
USB1-210ENST00000565151 PSEN1P49768 467 aa15.42■□□□□ 0.06
USB1-210ENST00000565151 BCAT1P54687 386 aa15.42■□□□□ 0.06
USB1-210ENST00000565151 FOXK2Q01167 660 aa15.42■□□□□ 0.06
USB1-210ENST00000565151 APBA1Q02410 837 aa15.42■□□□□ 0.06
USB1-210ENST00000565151 BST2Q10589 180 aaKnown RBP15.42■□□□□ 0.06
USB1-210ENST00000565151 KCNH2Q12809 1159 aa15.42■□□□□ 0.06
USB1-210ENST00000565151 STIM1Q13586 685 aa15.42■□□□□ 0.06
USB1-210ENST00000565151 NUMA1Q14980 2115 aa15.42■□□□□ 0.06
USB1-210ENST00000565151 MAP7D1Q3KQU3 841 aa15.42■□□□□ 0.06
USB1-210ENST00000565151 CCDC40Q4G0X9 1142 aa15.42■□□□□ 0.06
USB1-210ENST00000565151 BTBD8Q5XKL5 378 aa15.42■□□□□ 0.06
USB1-210ENST00000565151 PMS2CLQ68D20 193 aa15.42■□□□□ 0.06
USB1-210ENST00000565151 TMEM270Q6UE05 265 aa15.42■□□□□ 0.06
USB1-210ENST00000565151 PPM1KQ8N3J5 372 aa15.42■□□□□ 0.06
USB1-210ENST00000565151 ZNF513Q8N8E2 541 aaPredicted RBP15.42■□□□□ 0.06
USB1-210ENST00000565151 EHBP1Q8NDI1 1231 aa15.42■□□□□ 0.06
USB1-210ENST00000565151 EDEM1Q92611 657 aa15.42■□□□□ 0.06
USB1-210ENST00000565151 NT5C1BQ96P26 610 aa15.42■□□□□ 0.06
USB1-210ENST00000565151 GTPBP4Q9BZE4 634 aaKnown RBP15.42■□□□□ 0.06
USB1-210ENST00000565151 CD93Q9NPY3 652 aa15.42■□□□□ 0.06
USB1-210ENST00000565151 MARCH2Q9P0N8 246 aa15.42■□□□□ 0.06
USB1-210ENST00000565151 SFMBT1Q9UHJ3 866 aa15.42■□□□□ 0.06
USB1-210ENST00000565151 CDV3Q9UKY7 258 aaKnown RBP15.42■□□□□ 0.06
USB1-210ENST00000565151 CIZ1Q9ULV3 898 aaPredicted RBP15.42■□□□□ 0.06
USB1-210ENST00000565151 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.42■□□□□ 0.06
USB1-210ENST00000565151 PCDHB4Q9Y5E5 795 aa15.42■□□□□ 0.06
USB1-210ENST00000565151 SLC12A8A0AV02 714 aa15.41■□□□□ 0.06
USB1-210ENST00000565151 WASH3PC4AMC7 463 aa15.41■□□□□ 0.06
USB1-210ENST00000565151 FYNP06241 537 aa15.41■□□□□ 0.06
USB1-210ENST00000565151 RALAP11233 206 aa15.41■□□□□ 0.06
USB1-210ENST00000565151 GABRG2P18507 467 aa15.41■□□□□ 0.06
USB1-210ENST00000565151 TRIM21P19474 475 aaKnown RBP15.41■□□□□ 0.06
USB1-210ENST00000565151 KCNA4P22459 653 aa15.41■□□□□ 0.06
USB1-210ENST00000565151 TBXAS1P24557 533 aaPredicted RBP15.41■□□□□ 0.06
USB1-210ENST00000565151 MPLP40238 635 aa15.41■□□□□ 0.06
USB1-210ENST00000565151 P2RY2P41231 377 aa15.41■□□□□ 0.06
USB1-210ENST00000565151 RGS7P49802 495 aa15.41■□□□□ 0.06
USB1-210ENST00000565151 PAK1Q13153 545 aa15.41■□□□□ 0.06
USB1-210ENST00000565151 TRIP4Q15650 581 aaPredicted RBP15.41■□□□□ 0.06
USB1-210ENST00000565151 CAMK4Q16566 473 aa15.41■□□□□ 0.06
USB1-210ENST00000565151 GEN1Q17RS7 908 aa15.41■□□□□ 0.06
USB1-210ENST00000565151 HSF5Q4G112 596 aaPredicted RBP15.41■□□□□ 0.06
USB1-210ENST00000565151 BSPRYQ5W0U4 402 aa15.41■□□□□ 0.06
USB1-210ENST00000565151 GRAMD4Q6IC98 578 aa15.41■□□□□ 0.06
USB1-210ENST00000565151 DENND1CQ8IV53 801 aa15.41■□□□□ 0.06
USB1-210ENST00000565151 FAM217AQ8IXS0 508 aa15.41■□□□□ 0.06
USB1-210ENST00000565151 RBBP8NLQ8NC74 664 aaPredicted RBP15.41■□□□□ 0.06
USB1-210ENST00000565151 KCTD13Q8WZ19 329 aa15.41■□□□□ 0.06
USB1-210ENST00000565151 SLC6A17Q9H1V8 727 aa15.41■□□□□ 0.06
USB1-210ENST00000565151 ACP6Q9NPH0 428 aa15.41■□□□□ 0.06
USB1-210ENST00000565151 KIAA1468Q9P260 1216 aa15.41■□□□□ 0.06
USB1-210ENST00000565151 WDR35Q9P2L0 1181 aa15.41■□□□□ 0.06
USB1-210ENST00000565151 LSM7Q9UK45 103 aaKnown RBP15.41■□□□□ 0.06
USB1-210ENST00000565151 CNTN6Q9UQ52 1028 aa15.41■□□□□ 0.06
USB1-210ENST00000565151 RAD54BQ9Y620 910 aa15.41■□□□□ 0.06
USB1-210ENST00000565151 PCDH15Q96QU1 1955 aa15.41■□□□□ 0.06
USB1-210ENST00000565151 NYNRINQ9P2P1 1898 aaKnown RBP15.41■□□□□ 0.06
USB1-210ENST00000565151 TCRBV21S2A2A0A5A6 115 aa15.4■□□□□ 0.06
USB1-210ENST00000565151 BCLAF3A2AJT9 711 aaKnown RBP15.4■□□□□ 0.06
USB1-210ENST00000565151 PATE3B3GLJ2 98 aa15.4■□□□□ 0.06
USB1-210ENST00000565151 PAEPP09466 180 aa15.4■□□□□ 0.06
USB1-210ENST00000565151 PPP1R2P41236 205 aa15.4■□□□□ 0.06
USB1-210ENST00000565151 DAOAP59103 153 aa15.4■□□□□ 0.06
USB1-210ENST00000565151 CNGA2Q16280 664 aa15.4■□□□□ 0.06
USB1-210ENST00000565151 EOGTQ5NDL2 527 aa15.4■□□□□ 0.06
USB1-210ENST00000565151 TMEM215Q68D42 235 aa15.4■□□□□ 0.06
USB1-210ENST00000565151 GJB7Q6PEY0 223 aa15.4■□□□□ 0.06
USB1-210ENST00000565151 CCDC26Q8TAB7 109 aa15.4■□□□□ 0.06
USB1-210ENST00000565151 NETO1Q8TDF5 533 aa15.4■□□□□ 0.06
USB1-210ENST00000565151 HMGB4Q8WW32 186 aa15.4■□□□□ 0.06
USB1-210ENST00000565151 RTKNQ9BST9 563 aa15.4■□□□□ 0.06
USB1-210ENST00000565151 INTS2Q9H0H0 1204 aaKnown RBP15.4■□□□□ 0.06
USB1-210ENST00000565151 AJAP1Q9UKB5 411 aaPredicted RBP15.4■□□□□ 0.06
USB1-210ENST00000565151 PCDHGA5Q9Y5G8 931 aa15.4■□□□□ 0.06
USB1-210ENST00000565151 P4HA2O15460 535 aa15.39■□□□□ 0.05
USB1-210ENST00000565151 MSI1O43347 362 aaKnown RBP15.39■□□□□ 0.05
USB1-210ENST00000565151 LCP1P13796 627 aa15.39■□□□□ 0.05
USB1-210ENST00000565151 NTSR1P30989 418 aa15.39■□□□□ 0.05
USB1-210ENST00000565151 GBP1P32455 592 aa15.39■□□□□ 0.05
USB1-210ENST00000565151 PTGER3P43115 390 aa15.39■□□□□ 0.05
USB1-210ENST00000565151 DGKGP49619 791 aa15.39■□□□□ 0.05
USB1-210ENST00000565151 SGSHP51688 502 aa15.39■□□□□ 0.05
USB1-210ENST00000565151 MFAP3P55082 362 aa15.39■□□□□ 0.05
USB1-210ENST00000565151 UBE2HP62256 183 aa15.39■□□□□ 0.05
USB1-210ENST00000565151 COG7P83436 770 aa15.39■□□□□ 0.05
USB1-210ENST00000565151 CREB5Q02930 508 aa15.39■□□□□ 0.05
USB1-210ENST00000565151 GOLGA8FQ08AF8 430 aa15.39■□□□□ 0.05
USB1-210ENST00000565151 GOLGA8DPQ0D2H9 430 aa15.39■□□□□ 0.05
USB1-210ENST00000565151 USP39Q53GS9 565 aaKnown RBP15.39■□□□□ 0.05
USB1-210ENST00000565151 FMNL3Q8IVF7 1028 aa15.39■□□□□ 0.05
USB1-210ENST00000565151 KCNV2Q8TDN2 545 aa15.39■□□□□ 0.05
USB1-210ENST00000565151 PIWIL1Q96J94 861 aaKnown RBP15.39■□□□□ 0.05
USB1-210ENST00000565151 GABRG3Q99928 467 aa15.39■□□□□ 0.05
USB1-210ENST00000565151 LRRC4Q9HBW1 653 aa15.39■□□□□ 0.05
USB1-210ENST00000565151 CACNA2D2Q9NY47 1150 aa15.39■□□□□ 0.05
USB1-210ENST00000565151 CYTH4Q9UIA0 394 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms