RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 KRBA1A5PL33 1030 aa16.67■□□□□ 0.26
RAB40C-208ENST00000564703 ARNTLO00327 626 aa16.67■□□□□ 0.26
RAB40C-208ENST00000564703 SCAMP3O14828 347 aaKnown RBP16.67■□□□□ 0.26
RAB40C-208ENST00000564703 NCAM2O15394 837 aa16.67■□□□□ 0.26
RAB40C-208ENST00000564703 FYNP06241 537 aa16.67■□□□□ 0.26
RAB40C-208ENST00000564703 ARSAP15289 507 aa16.67■□□□□ 0.26
RAB40C-208ENST00000564703 NOS2P35228 1153 aa16.67■□□□□ 0.26
RAB40C-208ENST00000564703 CHKAP35790 457 aa16.67■□□□□ 0.26
RAB40C-208ENST00000564703 TBX4P57082 545 aa16.67■□□□□ 0.26
RAB40C-208ENST00000564703 STARD6P59095 220 aa16.67■□□□□ 0.26
RAB40C-208ENST00000564703 CENPCQ03188 943 aa16.67■□□□□ 0.26
RAB40C-208ENST00000564703 EML3Q32P44 896 aa16.67■□□□□ 0.26
RAB40C-208ENST00000564703 C2CD6Q53TS8 623 aa16.67■□□□□ 0.26
RAB40C-208ENST00000564703 SYPL2Q5VXT5 272 aa16.67■□□□□ 0.26
RAB40C-208ENST00000564703 OLFML1Q6UWY5 402 aa16.67■□□□□ 0.26
RAB40C-208ENST00000564703 ZNF571Q7Z3V5 609 aaPredicted RBP16.67■□□□□ 0.26
RAB40C-208ENST00000564703 BMP8AQ7Z5Y6 402 aa16.67■□□□□ 0.26
RAB40C-208ENST00000564703 XYLT1Q86Y38 959 aa16.67■□□□□ 0.26
RAB40C-208ENST00000564703 PHF13Q86YI8 300 aaPredicted RBP16.67■□□□□ 0.26
RAB40C-208ENST00000564703 SUGP1Q8IWZ8 645 aaKnown RBP16.67■□□□□ 0.26
RAB40C-208ENST00000564703 DRC7Q8IY82 874 aa16.67■□□□□ 0.26
RAB40C-208ENST00000564703 RIN3Q8TB24 985 aa16.67■□□□□ 0.26
RAB40C-208ENST00000564703 FAM3CQ92520 227 aa16.67■□□□□ 0.26
RAB40C-208ENST00000564703 RNF34Q969K3 372 aa16.67■□□□□ 0.26
RAB40C-208ENST00000564703 TMEM51Q9NW97 253 aa16.67■□□□□ 0.26
RAB40C-208ENST00000564703 RRN3Q9NYV6 651 aa16.67■□□□□ 0.26
RAB40C-208ENST00000564703 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.67■□□□□ 0.26
RAB40C-208ENST00000564703 SLC12A6Q9UHW9 1150 aa16.67■□□□□ 0.26
RAB40C-208ENST00000564703 TMCO5BA8MYB1 307 aa16.66■□□□□ 0.26
RAB40C-208ENST00000564703 ADH1CP00326 375 aa16.66■□□□□ 0.26
RAB40C-208ENST00000564703 GZMAP12544 262 aa16.66■□□□□ 0.26
RAB40C-208ENST00000564703 CORO1AP31146 461 aaKnown RBP16.66■□□□□ 0.26
RAB40C-208ENST00000564703 MATKP42679 507 aa16.66■□□□□ 0.26
RAB40C-208ENST00000564703 ZNF75DP51815 510 aa16.66■□□□□ 0.26
RAB40C-208ENST00000564703 TRIP4Q15650 581 aaPredicted RBP16.66■□□□□ 0.26
RAB40C-208ENST00000564703 NUGGCQ68CJ6 796 aa16.66■□□□□ 0.26
RAB40C-208ENST00000564703 DENND1CQ8IV53 801 aa16.66■□□□□ 0.26
RAB40C-208ENST00000564703 CNGA4Q8IV77 575 aa16.66■□□□□ 0.26
RAB40C-208ENST00000564703 BBS7Q8IWZ6 715 aa16.66■□□□□ 0.26
RAB40C-208ENST00000564703 DQX1Q8TE96 717 aaKnown RBP16.66■□□□□ 0.26
RAB40C-208ENST00000564703 MRFAP1L1Q96HT8 127 aa16.66■□□□□ 0.26
RAB40C-208ENST00000564703 VCPIP1Q96JH7 1222 aa16.66■□□□□ 0.26
RAB40C-208ENST00000564703 SELENOOQ9BVL4 669 aa16.66■□□□□ 0.26
RAB40C-208ENST00000564703 TBC1D17Q9HA65 648 aa16.66■□□□□ 0.26
RAB40C-208ENST00000564703 HPS4Q9NQG7 708 aa16.66■□□□□ 0.26
RAB40C-208ENST00000564703 STAP1Q9ULZ2 295 aa16.66■□□□□ 0.26
RAB40C-208ENST00000564703 TLR6Q9Y2C9 796 aa16.66■□□□□ 0.26
RAB40C-208ENST00000564703 KANSL1LA0AUZ9 987 aa16.65■□□□□ 0.26
RAB40C-208ENST00000564703 ANKRD62A6NC57 917 aa16.65■□□□□ 0.26
RAB40C-208ENST00000564703 FAM86C2PA6NEL3 165 aa16.65■□□□□ 0.26
RAB40C-208ENST00000564703 PRR33A8MZF0 331 aa16.65■□□□□ 0.26
RAB40C-208ENST00000564703 AKR1B15C9JRZ8 316 aaPredicted RBP16.65■□□□□ 0.26
RAB40C-208ENST00000564703 SPECC1L-ADORA2AF8WAN1 911 aa16.65■□□□□ 0.26
RAB40C-208ENST00000564703 AP5Z1O43299 807 aa16.65■□□□□ 0.26
RAB40C-208ENST00000564703 MSI1O43347 362 aaKnown RBP16.65■□□□□ 0.26
RAB40C-208ENST00000564703 TRUB2O95900 331 aaKnown RBP16.65■□□□□ 0.26
RAB40C-208ENST00000564703 F9P00740 461 aa16.65■□□□□ 0.26
RAB40C-208ENST00000564703 SLC2A3P11169 496 aa16.65■□□□□ 0.26
RAB40C-208ENST00000564703 KRT3P12035 628 aa16.65■□□□□ 0.26
RAB40C-208ENST00000564703 SLC11A2P49281 568 aa16.65■□□□□ 0.26
RAB40C-208ENST00000564703 GAD2Q05329 585 aa16.65■□□□□ 0.26
RAB40C-208ENST00000564703 C1QBPQ07021 282 aaKnown RBP16.65■□□□□ 0.26
RAB40C-208ENST00000564703 UBXN2BQ14CS0 331 aa16.65■□□□□ 0.26
RAB40C-208ENST00000564703 DHCR24Q15392 516 aa16.65■□□□□ 0.26
RAB40C-208ENST00000564703 ANO4Q32M45 955 aa16.65■□□□□ 0.26
RAB40C-208ENST00000564703 E4F1Q66K89 784 aaPredicted RBP16.65■□□□□ 0.26
RAB40C-208ENST00000564703 SND1Q7KZF4 910 aaKnown RBP eCLIP16.65■□□□□ 0.26
RAB40C-208ENST00000564703 PHLDB2Q86SQ0 1253 aa16.65■□□□□ 0.26
RAB40C-208ENST00000564703 FBXL6Q8N531 539 aa16.65■□□□□ 0.26
RAB40C-208ENST00000564703 ADAM32Q8TC27 787 aa16.65■□□□□ 0.26
RAB40C-208ENST00000564703 PIWIL1Q96J94 861 aaKnown RBP16.65■□□□□ 0.26
RAB40C-208ENST00000564703 SLC2A13Q96QE2 648 aa16.65■□□□□ 0.26
RAB40C-208ENST00000564703 DEF6Q9H4E7 631 aa16.65■□□□□ 0.26
RAB40C-208ENST00000564703 FAM204AQ9H8W3 233 aa16.65■□□□□ 0.26
RAB40C-208ENST00000564703 ADAMTS1Q9UHI8 967 aa16.65■□□□□ 0.26
RAB40C-208ENST00000564703 SIT1Q9Y3P8 196 aa16.65■□□□□ 0.26
RAB40C-208ENST00000564703 CUL9Q8IWT3 2517 aa16.65■□□□□ 0.26
RAB40C-208ENST00000564703 TECTAO75443 2155 aa16.64■□□□□ 0.25
RAB40C-208ENST00000564703 SYNJ2BP-COX16A0A087WUM0 186 aa16.64■□□□□ 0.25
RAB40C-208ENST00000564703 FAM170BA6NMN3 283 aa16.64■□□□□ 0.25
RAB40C-208ENST00000564703 RTN2O75298 545 aa16.64■□□□□ 0.25
RAB40C-208ENST00000564703 DAB1O75553 588 aa16.64■□□□□ 0.25
RAB40C-208ENST00000564703 APOEP02649 317 aa16.64■□□□□ 0.25
RAB40C-208ENST00000564703 FTLP02792 175 aaPredicted RBP16.64■□□□□ 0.25
RAB40C-208ENST00000564703 CYBBP04839 570 aa16.64■□□□□ 0.25
RAB40C-208ENST00000564703 DESP17661 470 aa16.64■□□□□ 0.25
RAB40C-208ENST00000564703 CD72P21854 359 aa16.64■□□□□ 0.25
RAB40C-208ENST00000564703 HNRNPH3P31942 346 aaKnown RBP16.64■□□□□ 0.25
RAB40C-208ENST00000564703 CTHP32929 405 aa16.64■□□□□ 0.25
RAB40C-208ENST00000564703 GJA4P35212 333 aa16.64■□□□□ 0.25
RAB40C-208ENST00000564703 SOX9P48436 509 aa16.64■□□□□ 0.25
RAB40C-208ENST00000564703 CLCN5P51795 746 aa16.64■□□□□ 0.25
RAB40C-208ENST00000564703 ADKP55263 362 aaKnown RBP16.64■□□□□ 0.25
RAB40C-208ENST00000564703 RING1Q06587 406 aa16.64■□□□□ 0.25
RAB40C-208ENST00000564703 NNTQ13423 1086 aa16.64■□□□□ 0.25
RAB40C-208ENST00000564703 LY6G5CQ5SRR4 150 aa16.64■□□□□ 0.25
RAB40C-208ENST00000564703 IER5LQ5T953 404 aa16.64■□□□□ 0.25
RAB40C-208ENST00000564703 RHBDF2Q6PJF5 856 aa16.64■□□□□ 0.25
RAB40C-208ENST00000564703 ARCQ7LC44 396 aa16.64■□□□□ 0.25
RAB40C-208ENST00000564703 MCOLN2Q8IZK6 566 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms