RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 ATP11AP98196 1134 aa13.46□□□□□ -0.25
SPG7-209ENST00000564047 C15orf59Q2T9L4 293 aaPredicted RBP13.46□□□□□ -0.25
SPG7-209ENST00000564047 MEI1Q5TIA1 1274 aa13.46□□□□□ -0.25
SPG7-209ENST00000564047 CC2D1AQ6P1N0 951 aaPredicted RBP13.46□□□□□ -0.25
SPG7-209ENST00000564047 NT5DC3Q86UY8 548 aa13.46□□□□□ -0.25
SPG7-209ENST00000564047 HS6ST3Q8IZP7 471 aa13.46□□□□□ -0.25
SPG7-209ENST00000564047 DQX1Q8TE96 717 aaKnown RBP13.46□□□□□ -0.25
SPG7-209ENST00000564047 FAM172AQ8WUF8 416 aa13.46□□□□□ -0.25
SPG7-209ENST00000564047 ZNF707Q96C28 371 aaPredicted RBP13.46□□□□□ -0.25
SPG7-209ENST00000564047 WDR24Q96S15 920 aa13.46□□□□□ -0.25
SPG7-209ENST00000564047 TBCBQ99426 244 aa13.46□□□□□ -0.25
SPG7-209ENST00000564047 CORO1BQ9BR76 489 aa13.46□□□□□ -0.25
SPG7-209ENST00000564047 SMOC2Q9H3U7 446 aa13.46□□□□□ -0.25
SPG7-209ENST00000564047 IGFLR1Q9H665 355 aa13.46□□□□□ -0.25
SPG7-209ENST00000564047 USTQ9Y2C2 406 aa13.46□□□□□ -0.25
SPG7-209ENST00000564047 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.45□□□□□ -0.26
SPG7-209ENST00000564047 MIF4GDA9UHW6 222 aaKnown RBP13.45□□□□□ -0.26
SPG7-209ENST00000564047 M0QYT0 321 aa13.45□□□□□ -0.26
SPG7-209ENST00000564047 DCXO43602 365 aa13.45□□□□□ -0.26
SPG7-209ENST00000564047 NCK2O43639 380 aa13.45□□□□□ -0.26
SPG7-209ENST00000564047 TLR5O60602 858 aa13.45□□□□□ -0.26
SPG7-209ENST00000564047 LRCH4O75427 683 aa13.45□□□□□ -0.26
SPG7-209ENST00000564047 GLP2RO95838 553 aa13.45□□□□□ -0.26
SPG7-209ENST00000564047 TRUB2O95900 331 aaKnown RBP13.45□□□□□ -0.26
SPG7-209ENST00000564047 FTCDO95954 541 aa13.45□□□□□ -0.26
SPG7-209ENST00000564047 IGLV3-25P01717 112 aa13.45□□□□□ -0.26
SPG7-209ENST00000564047 KCNA5P22460 613 aa13.45□□□□□ -0.26
SPG7-209ENST00000564047 GABRR2P28476 465 aa13.45□□□□□ -0.26
SPG7-209ENST00000564047 GBP1P32455 592 aa13.45□□□□□ -0.26
SPG7-209ENST00000564047 RDXP35241 583 aaKnown RBP13.45□□□□□ -0.26
SPG7-209ENST00000564047 HDAC4P56524 1084 aa13.45□□□□□ -0.26
SPG7-209ENST00000564047 ADAM15Q13444 863 aa13.45□□□□□ -0.26
SPG7-209ENST00000564047 HADHQ16836 314 aaKnown RBP13.45□□□□□ -0.26
SPG7-209ENST00000564047 CDO1Q16878 200 aa13.45□□□□□ -0.26
SPG7-209ENST00000564047 HECTD3Q5T447 861 aa13.45□□□□□ -0.26
SPG7-209ENST00000564047 SH3PXD2AQ5TCZ1 1133 aa13.45□□□□□ -0.26
SPG7-209ENST00000564047 LRRC38Q5VT99 294 aa13.45□□□□□ -0.26
SPG7-209ENST00000564047 OTUD1Q5VV17 481 aaPredicted RBP13.45□□□□□ -0.26
SPG7-209ENST00000564047 PTCRAQ6ISU1 281 aaPredicted RBP13.45□□□□□ -0.26
SPG7-209ENST00000564047 KLHDC10Q6PID8 442 aa13.45□□□□□ -0.26
SPG7-209ENST00000564047 SYT10Q6XYQ8 523 aa13.45□□□□□ -0.26
SPG7-209ENST00000564047 RSRC2Q7L4I2 434 aaKnown RBP13.45□□□□□ -0.26
SPG7-209ENST00000564047 TMEM150AQ86TG1 271 aa13.45□□□□□ -0.26
SPG7-209ENST00000564047 ARFGAP1Q8N6T3 406 aa13.45□□□□□ -0.26
SPG7-209ENST00000564047 MRPS31Q92665 395 aaKnown RBP13.45□□□□□ -0.26
SPG7-209ENST00000564047 CD101Q93033 1021 aa13.45□□□□□ -0.26
SPG7-209ENST00000564047 GCNAQ96QF7 691 aa13.45□□□□□ -0.26
SPG7-209ENST00000564047 DNMT3BQ9UBC3 853 aaKnown RBP13.45□□□□□ -0.26
SPG7-209ENST00000564047 DNAI1Q9UI46 699 aa13.45□□□□□ -0.26
SPG7-209ENST00000564047 HYOU1Q9Y4L1 999 aa13.45□□□□□ -0.26
SPG7-209ENST00000564047 MYH10P35580 1976 aa13.45□□□□□ -0.26
SPG7-209ENST00000564047 CACNA1AO00555 2505 aa13.44□□□□□ -0.26
SPG7-209ENST00000564047 CCDC66A2RUB6 948 aa13.44□□□□□ -0.26
SPG7-209ENST00000564047 RHOP08100 348 aa13.44□□□□□ -0.26
SPG7-209ENST00000564047 MYL4P12829 197 aa13.44□□□□□ -0.26
SPG7-209ENST00000564047 IL9P15248 144 aa13.44□□□□□ -0.26
SPG7-209ENST00000564047 HOXB8P17481 243 aaPredicted RBP13.44□□□□□ -0.26
SPG7-209ENST00000564047 PFKLP17858 780 aa13.44□□□□□ -0.26
SPG7-209ENST00000564047 TFE3P19532 575 aaPredicted RBP13.44□□□□□ -0.26
SPG7-209ENST00000564047 CTNNA2P26232 953 aa13.44□□□□□ -0.26
SPG7-209ENST00000564047 MIPP30301 263 aa13.44□□□□□ -0.26
SPG7-209ENST00000564047 CASQ1P31415 396 aa13.44□□□□□ -0.26
SPG7-209ENST00000564047 ATP5C1P36542 298 aaKnown RBP13.44□□□□□ -0.26
SPG7-209ENST00000564047 TAS2R40P59535 323 aa13.44□□□□□ -0.26
SPG7-209ENST00000564047 PITX1P78337 314 aaPredicted RBP13.44□□□□□ -0.26
SPG7-209ENST00000564047 DEUP1Q05D60 604 aa13.44□□□□□ -0.26
SPG7-209ENST00000564047 EIF4EBP2Q13542 120 aaPredicted RBP13.44□□□□□ -0.26
SPG7-209ENST00000564047 RPS6KA1Q15418 735 aa13.44□□□□□ -0.26
SPG7-209ENST00000564047 PUS10Q3MIT2 529 aaKnown RBP13.44□□□□□ -0.26
SPG7-209ENST00000564047 ANKRD54Q6NXT1 300 aa13.44□□□□□ -0.26
SPG7-209ENST00000564047 GAREM2Q75VX8 874 aa13.44□□□□□ -0.26
SPG7-209ENST00000564047 PDZD4Q76G19 769 aaPredicted RBP13.44□□□□□ -0.26
SPG7-209ENST00000564047 TAC4Q86UU9 113 aa13.44□□□□□ -0.26
SPG7-209ENST00000564047 CPNE8Q86YQ8 564 aa13.44□□□□□ -0.26
SPG7-209ENST00000564047 RHOT1Q8IXI2 618 aa13.44□□□□□ -0.26
SPG7-209ENST00000564047 SMG7Q92540 1137 aaKnown RBP13.44□□□□□ -0.26
SPG7-209ENST00000564047 HES6Q96HZ4 224 aa13.44□□□□□ -0.26
SPG7-209ENST00000564047 SERPINB11Q96P15 392 aa13.44□□□□□ -0.26
SPG7-209ENST00000564047 NAPGQ99747 312 aaPredicted RBP13.44□□□□□ -0.26
SPG7-209ENST00000564047 ADAM33Q9BZ11 813 aa13.44□□□□□ -0.26
SPG7-209ENST00000564047 CCSER2Q9H7U1 834 aa13.44□□□□□ -0.26
SPG7-209ENST00000564047 FAM204AQ9H8W3 233 aa13.44□□□□□ -0.26
SPG7-209ENST00000564047 PIDD1Q9HB75 910 aa13.44□□□□□ -0.26
SPG7-209ENST00000564047 HCFC1R1Q9NWW0 138 aa13.44□□□□□ -0.26
SPG7-209ENST00000564047 DDIT4Q9NX09 232 aa13.44□□□□□ -0.26
SPG7-209ENST00000564047 USP18Q9UMW8 372 aa13.44□□□□□ -0.26
SPG7-209ENST00000564047 ATG2AQ2TAZ0 1938 aa13.43□□□□□ -0.26
SPG7-209ENST00000564047 CTAGE9A4FU28 777 aa13.43□□□□□ -0.26
SPG7-209ENST00000564047 SOBPA7XYQ1 873 aa13.43□□□□□ -0.26
SPG7-209ENST00000564047 ZNF197O14709 1029 aa13.43□□□□□ -0.26
SPG7-209ENST00000564047 LINC01565O15544 149 aa13.43□□□□□ -0.26
SPG7-209ENST00000564047 IRAK2O43187 625 aa13.43□□□□□ -0.26
SPG7-209ENST00000564047 PSTPIP1O43586 416 aa13.43□□□□□ -0.26
SPG7-209ENST00000564047 OLFM2O95897 454 aa13.43□□□□□ -0.26
SPG7-209ENST00000564047 OAS1P00973 400 aaKnown RBP13.43□□□□□ -0.26
SPG7-209ENST00000564047 CTNNA1P35221 906 aaKnown RBP13.43□□□□□ -0.26
SPG7-209ENST00000564047 SSR1P43307 286 aaKnown RBP13.43□□□□□ -0.26
SPG7-209ENST00000564047 KPNA1P52294 538 aaPredicted RBP13.43□□□□□ -0.26
SPG7-209ENST00000564047 SLC25A11Q02978 314 aaKnown RBP13.43□□□□□ -0.26
SPG7-209ENST00000564047 NME3Q13232 169 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms